Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00524 ATGGGAGACATCTTATCAGAGTTTAATATGACCACAATGGATTATCCGCGGCATTATGGGGGCTGCTCAGTGCTCACAATTGAAGTGATCCACCATTTTCTAAGATCATGCGAGAGCTGGTTCTCAATTGGGCCAGACAATGTGCTGTTGATGCACTTTGAACACGGTGCTTGGCCAGTTTTGGCTTTTATACTGGCTACACTCTTGATCTATAGGAATCAGTATTCTGGGGAGCAGAAAACCTTGGATATGGTTTACAAGCAAGCTCCTCGTGATCTTTTGAAGTTTGATTCTTCAATTAACCCCGTTCCTTCTCAACTAAGGTATTTGCAGTATTTATTACAGAGGAATGTTGCCCTGGAATGGCCGCCCTCAGACAGAGTTCGCATCTTAGACTGTATAATTCTAAGATTAATTCCTGATTTTGGTGGAGAGAATGGTTGCCGACCTTTGTTTCACATATATGGACGAAATCCTTTCCATGTTTCTGACCGAACACCAAAAGTTATGTATTCAACTCAAAAGAAAGGCAAAACTGTCCGGGGTTACAAGCAGGGGGAATGTGAATTGGCTAAAATTGATATCAATTGTCATATCCTTGGTGATGTCGTGATTGAGTGCTTTAGCTTGAATGATGACATGGAACACAAAGAGTTGATGTTTCGAGTTGCCTTAAACACATCTTTTATTAGGTCTAATCTTTTGATCCTTAACAGTGATGAAATCGACATGTTGTGGAATGTTAAAGATCGATTCCCAGAGGGTTTCAGAGTAGAGATTTTTTTCTGTGAGGTAGATGCTGTTCCGCCTATTACCTCGGGTGACATCTTATGCTTTGAGGAGGAGGGCCTTCCGGTGGAGGCTTTTGCTAAAGTTCAAGAGATCTTCAGTCATATTGACTGGTTAGATACTAAGAAGGATGTTGCCCTGACAGTGCTACAACAGATGACCACATTAAATATCGCCTGTAAGAATCTGGATTCTGATTCTCACCAGAACCTGCAAAGTAGTCCTGTTTTGGTTGGTAAAGATTCTGGAAAGCTGCAGGAGATGAGTATTCCACGTTTAGAAAATGAAAATGTAACCCCAAAGGGCACTCCAGTGGTTTCACCAGAGGCTTTGCAGAATGAAAAAGACCCTAAACTTCAAGATAATCAGATGCCTAGAAATGTAGAAGTTTCCATGTTGACAAATGAACTTCTTGGTAGTCTGGGTCCAACATTGGTTGTTTCTCAAGAGCCTGAAAATGTGGGTGCTAAAAGTGTACTAACTGAACCAATATCTCCCGCACCCACTCTTCCATGTAGCCCTGTGATTCCTGGTGCTGTCAATTCTTTGCCTACCCCGCCACCTCCTCCACCATTGCCATCACAGTCTCGAACTCATAATAATTCTGCTTTGAAATTAGATCAGTCCATGATTATTAAAGAGGCAGAGACTTTTTTAGACAATGAGGGACGGTTGTTAACAATTATCCCTCCCCTTGGATCTCAAACTTCATCATCAACTACCATTCAGAGTACTTTCTCCTCTACTTTTCAATCTTCTTCAGCTTCTGAATCTTCGTCATTGAATAAAGCTTCCTATCCATCTCCTCCAACACCACCCACACCACCTCCTCCCCCAACGCCACCTTTAAAACAAAACATGGTTTTGAGAGTGTCACCTTTTACACCTGTAACTTCCCCTTCTCTTTTAACACCGGACGCAGTTCCTTCAATATCATCTCGAGCACCGCTGCCCCCACCACCCCCAAAACCTCCTATTTTTGTGCCGTCTCTAGCATCAACACAATTACTACCGCTGCCACCACCACCTCCTCCTCCAACGCCACCTTTGAAACAAAACATGGTTTTGAGAGTTTCACCTCTTACACCTTCTCCCTCCCCTTCCCCTTCCCCTTCCCCCCACCCTTTAACATGTGGTGCAAGTCCTTTAGTATCATCTCCACTAGTGCCGCCACCACCACCACCGCCACCTCCTATTTCTATGACATCTTCTCCGGCCTTAGGTGCTACCATTTCAACTCAAACATCAACAGCACCACTACCACCACCACCTCCTCCGCGTTCAATATCTAAAAGTACTTCCTCACCTGTTCCTTTAGTGCCTTCACCCCCTCCTCCAGCTCCATTTGCTAAAAGAGTTCCAAATTCAGGAGAGGCATTTCCTGCAAATAGTACATTTAGATCAAGTTGTACGTCTATTTCAAAGGGGCGAAGCTTGTATCGCACTATAAGTCCAAGAATCATAACAAAAAAAATGAAGCCATTGCATTGGTTGAAAATAACAAGAGCAGCACAAGGAAGCTTATGGGCCGAGACACAAAAAACTGGTGAACTCAATATGGCTCCAGAGATTGACATGTCAGAGCTTGAAAATCTCTTCTCTGTAGTTGTTTCTGCCTCTGATCCTAGCAAGAAGTCTAGGGGACGTGGTTTAGTTCGTACTAAATCTGAGAAAGTGCAGTTGATTGACCACAGACGAGCATACAATTGTGAAATTATGCTTTCAAAGGTCAAAGTGCCATTGCAGTATGTATTGAGTTCAGTGCTAGCTCTGGAAGATTCTTTGGCTCTGGATGTTGATCTGGTTGAAAACCTAGTTAAGTTTTGTCCAACAAAAGAGGAAATGGAACTAATAAAGGGGTATACCGGAGAAAAGAAGAAGCTTGGAAAATGTGAACAGTTCTTCTTAGAATTAATGCAAGTATCGAGGATAGAATCTAAACTCAGAGTTTTCTTATTCAAGATTCAGTTCAACAACCAGCTCAGGGGCTCTGTCAAATTAAAGAGAATTATGCAGACAATTCTTTCTCTAGGAAATGCTTTAAACCAAGGAACTGCTAGGGGTTCAGCTATTGGATTTAGGCTGGATAGCCTTCTTAAACTGACTGAAACACGTGCACGGAACAACAATATGACTCTCATGCATTATCTTTGTAAGATTCTCTATCACAATTACTTGTTATTAAATTTGCTTTACTTGTTACATAATTTTATTTTTTGTTTACTGAGTGTAATACAACTGAAAATTTTGGCAGATGAAACGCAAGCCATAAGCAAAGGGCTTGTGAACATAGTTCAAGAGTTGTCTACTTCTGAAAATGATAACCTTGTATTGGTTGAATTCCGTGAGAAATTGAAAAAATTCCTGGATTTTGCTGAAGCAGAAGTAAGACGTTTAGCTTCACTCCACTCAGCGGTGGGTAGAAATGTGGATTCGCTGATTATTTACTTTGGAGAAGACCCAGGTCGCTGCCCCTTTGAACAGGTTGTTGCAACCCTGCTCAAATTCGTAAAAGCTTTCAACCGAGCCCACGAAGAAAATGAGCTCGAAATGAAGAAAACAGCACAAATTGAGAAGTTAAAGAATGAACAAAAGCTGGATGCTCCAATCCATAGAAGAGACAAGATCAAGGTAGACTTTGAGTCATTGGCTGAATTGAAAATTGAAGAATTGGTTGAATGGGCTAACTTAGCTGGGTTGTGTATATTGGATGGAAGTTTCTGTGATGGGATTGTGAAATTGTTCTATGCCAATTCGGAATTGTCCACCCAACCATTAGAGGTCTGGGTTTACATGTTTGGATGGGAGTTGAGACTGATTCCCAAAGATATTAACATGCTCCTTGAATGTTTCATCACCATTGCCCTCAAACACCAACCTTCTCCTCCTGTTGTGCTTGCCAAGGTGCAGCAGATAGTTGTTCTCATTCCTCCATCTGTAGACGCATCGGTTCAAGGTGAGTACCACATCATTGATCTTATCTTCCTGAAGCAAGAAGTGACATCAAACTCGGTGAGAATTACGTTATGTTACATTAAGTATGCATCCGTCAAGTGCATCATTCCTGACAGGTTGCCCTCAACCGATGATAGTCACTGTGGGTGA 3894 42.04 MGDILSEFNMTTMDYPRHYGGCSVLTIEVIHHFLRSCESWFSIGPDNVLLMHFEHGAWPVLAFILATLLIYRNQYSGEQKTLDMVYKQAPRDLLKFDSSINPVPSQLRYLQYLLQRNVALEWPPSDRVRILDCIILRLIPDFGGENGCRPLFHIYGRNPFHVSDRTPKVMYSTQKKGKTVRGYKQGECELAKIDINCHILGDVVIECFSLNDDMEHKELMFRVALNTSFIRSNLLILNSDEIDMLWNVKDRFPEGFRVEIFFCEVDAVPPITSGDILCFEEEGLPVEAFAKVQEIFSHIDWLDTKKDVALTVLQQMTTLNIACKNLDSDSHQNLQSSPVLVGKDSGKLQEMSIPRLENENVTPKGTPVVSPEALQNEKDPKLQDNQMPRNVEVSMLTNELLGSLGPTLVVSQEPENVGAKSVLTEPISPAPTLPCSPVIPGAVNSLPTPPPPPPLPSQSRTHNNSALKLDQSMIIKEAETFLDNEGRLLTIIPPLGSQTSSSTTIQSTFSSTFQSSSASESSSLNKASYPSPPTPPTPPPPPTPPLKQNMVLRVSPFTPVTSPSLLTPDAVPSISSRAPLPPPPPKPPIFVPSLASTQLLPLPPPPPPPTPPLKQNMVLRVSPLTPSPSPSPSPSPHPLTCGASPLVSSPLVPPPPPPPPPISMTSSPALGATISTQTSTAPLPPPPPPRSISKSTSSPVPLVPSPPPPAPFAKRVPNSGEAFPANSTFRSSCTSISKGRSLYRTISPRIITKKMKPLHWLKITRAAQGSLWAETQKTGELNMAPEIDMSELENLFSVVVSASDPSKKSRGRGLVRTKSEKVQLIDHRRAYNCEIMLSKVKVPLQYVLSSVLALEDSLALDVDLVENLVKFCPTKEEMELIKGYTGEKKKLGKCEQFFLELMQVSRIESKLRVFLFKIQFNNQLRGSVKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNNMTLMHYLCKILYHNYLLLNLLYLLHNFIFCLLSVIQLKILADETQAISKGLVNIVQELSTSENDNLVLVEFREKLKKFLDFAEAEVRRLASLHSAVGRNVDSLIIYFGEDPGRCPFEQVVATLLKFVKAFNRAHEENELEMKKTAQIEKLKNEQKLDAPIHRRDKIKVDFESLAELKIEELVEWANLAGLCILDGSFCDGIVKLFYANSELSTQPLEVWVYMFGWELRLIPKDINMLLECFITIALKHQPSPPVVLAKVQQIVVLIPPSVDASVQGEYHIIDLIFLKQEVTSNSVRITLCYIKYASVKCIIPDRLPSTDDSHCG 1297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14804557 14831585 + BLOR20694 Blo08g00524 64476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00524 1297 ProSiteProfiles C2 tensin-type domain profile. 126 265 IPR014020 -
Blo08g00524 1297 Pfam C2 domain of PTEN tumour-suppressor protein 130 263 IPR014020 -
Blo08g00524 1297 MobiDBLite consensus disorder prediction 575 591 - -
Blo08g00524 1297 PANTHER FORMIN-J 2 1124 - -
Blo08g00524 1297 MobiDBLite consensus disorder prediction 680 714 - -
Blo08g00524 1297 Pfam Formin Homology 2 Domain 752 1103 IPR015425 -
Blo08g00524 1297 MobiDBLite consensus disorder prediction 529 547 - -
Blo08g00524 1297 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 129 265 IPR035892 -
Blo08g00524 1297 SMART PTEN_C2_2 124 264 IPR014020 -
Blo08g00524 1297 MobiDBLite consensus disorder prediction 515 549 - -
Blo08g00524 1297 MobiDBLite consensus disorder prediction 441 462 - -
Blo08g00524 1297 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 5 112 IPR029021 -
Blo08g00524 1297 MobiDBLite consensus disorder prediction 443 458 - -
Blo08g00524 1297 Coils Coil 1106 1126 - -
Blo08g00524 1297 Gene3D Protein tyrosine phosphatase superfamily 3 127 IPR029021 -
Blo08g00524 1297 MobiDBLite consensus disorder prediction 625 639 - -
Blo08g00524 1297 SMART it6_source 745 1189 IPR015425 -
Blo08g00524 1297 MobiDBLite consensus disorder prediction 573 727 - -
Blo08g00524 1297 SUPERFAMILY Formin homology 2 domain (FH2 domain) 684 1119 - -
Blo08g00524 1297 ProSiteProfiles Formin homology-2 (FH2) domain profile. 745 1129 IPR015425 -
Blo08g00524 1297 MobiDBLite consensus disorder prediction 598 614 - -
Blo08g00524 1297 Gene3D - 128 268 - -
Blo08g00524 1297 MobiDBLite consensus disorder prediction 648 665 - -
Blo08g00524 1297 Gene3D Formin, FH2 domain 748 1115 IPR042201 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00524 Blo-Chr8:14804557 Blo17g00002 Blo-Chr17:13808 1.61E-129 dispersed
Blo18g00683 Blo-Chr18:13925275 Blo08g00524 Blo-Chr8:14804557 8.55E-13 dispersed
Blo08g00524 Blo-Chr8:14804557 Blo12g01054 Blo-Chr12:28328199 3.68E-144 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00524 - - csv:101221713 1018.07