Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00530 ATGATTGTGGAAAATCAAAGAAGTGGTTTGGCAGCTGAAAATGGATCCGCTGACAAATTCCCGGTGGGTTTGCGTGTTCTTGCCGTCGATGACGACCCTATTTGCCTTAAAGTTTTGGAGAATCTGCTTCGCAGATGCAAATATCACGTTACCACTACTAATCAGGCGGTGCAGGCTCTGAAAATGTTGAGGGAAAACAGAAATATGTTTGACCTTGTTATCAGTGATGTAAATATGCCAGACATGGATGGATTTAAACTCCTTGAGCAGTTGTGGCTTGAAATGGACTTACCCGTTATCATGTTGTCAGCTCATAGCGATACTGAGCTTGTAATGAAGGGCGTTACTCACGGTGCTTGCGATTATTTGCTAAAACCTGTTCGAATCGAGGAGCTAAAGAACATATGGCAACACGTAATTCGAAGAAGGAAGTTTGATTTGAAAGAACAAAACAATTCGTCCAATCAAAACATTTATCAGCAAGGAAACAGCGAAAGCGAACAAGCTTTTTCGTCGACTGAAAATGGAGAAAATGGGAAACTAAACAGAAAGCGGAAGGATCAAAATGAAGATGGAGAAGAGGAAGGGGAAGAGACTGAAAATGAGAACGAAGACCCTTCAACCCAGAAGAAGCCTCGAGTGGTTTGGTCGGTTGAGTTGCACAGGAAATTCGTTGCAGCTGTTCATCAGCTGGGCCTCGACAAGGCTGTCCCGAAGAAGATACTGGATCTCATGAATGTTGAAGGACTCACAAGAGAAAATGTAGCCAGCCATTTGCAGAAATACAGACTCTACCTGAAAAGAATCAGCTGCGTGGCAACTCAGCAAGCTAATATTGCTGCTGCTTGGGAAGTTAAAGATGCCTCTTACATGCGAATTGGGGCCATTGACGGATTTGGAGACTTGTGCTCCTTAGCTGGAAATGGAAGATTTTCAAACACACCATTATCATCATATCCACCCAGTGGAATGCTCGGAAGATTGAATACACCAGCCGGATTGACCCTTCATGGAATTGCTTCTTCCAGCCTCGTCCAACAAGGCAATTCACAAAACTTAAACAATTCGGCTACCACCCTTGGTAAAGTCGAGCCTGGAATGTGTTCTACAAGTCAAACTCCAAGCGTATTTCAAGGGATTCCAACATCAATACAGATCAGTCAGTTACAGCCAGGAAAACCCAGTACTGTGGAGAAAGAGTTTAACCCCATTAATGGTGGATCAGGTTTTACATTAACGAACAATTCTATGTCCACTTCGCCTTTGGTATTACAAGGTAATTCGACTCAAATACCTAGTAGGAGAGGATTTGGAGCTGAATCTTCTGCAAAAGTGGCTTCATTGAGTCAAGATTCTTTCGATATTGGCATCAACAGTTCTAATAACTTGGATCACAATCGAAGCAACAAAAACTGGAATCACGCAGTTCAAATGTCCAGTTTCTCGTTAAATCCGTTTGAGAATTATGCTCATGATCAATTGACTTCAAATAACATGAGTATTTCTTCAACCCATTCGAGTATTGGTAGAGTTCCTGTTGATTACTCTTCGACTTGTGCCGATTTGGATCCTACACAAGATTCAAGTGGGGATCGATACCAAGAAGGGTTAATCGGAAATATTGTTCAAACGATGAATGTTCTACCAAAACGAAGGTTGGAAGAAAATAGGCAGGGTTTTCATCAGAATATGAATCATTCATACGCAGCTGTAGATTGTATGGGTTCGTTTGGTTTCTTAGGCTCGAGTATGGGCCAAAACAATACAGCTGGTCGGAAAGTGTTTGATGTTTCTTTCAGTAATCAGTTAATAACGGGCGGGACTCCTTTATATGCTCAGCATGGGAACAATCTGTTACATCAAGCTAAATCGCAGGATGGAGCTGTTCAAAGCAATTACGAATCATTTGAAGATGTCATGAATGCAATGATCAAACAGGAACAGAACGAGACATCGATGATGGAGGGAGGATTTGGATTCAACACTTACTCTCTCGGGTTGTAG 2004 42.07 MIVENQRSGLAAENGSADKFPVGLRVLAVDDDPICLKVLENLLRRCKYHVTTTNQAVQALKMLRENRNMFDLVISDVNMPDMDGFKLLEQLWLEMDLPVIMLSAHSDTELVMKGVTHGACDYLLKPVRIEELKNIWQHVIRRRKFDLKEQNNSSNQNIYQQGNSESEQAFSSTENGENGKLNRKRKDQNEDGEEEGEETENENEDPSTQKKPRVVWSVELHRKFVAAVHQLGLDKAVPKKILDLMNVEGLTRENVASHLQKYRLYLKRISCVATQQANIAAAWEVKDASYMRIGAIDGFGDLCSLAGNGRFSNTPLSSYPPSGMLGRLNTPAGLTLHGIASSSLVQQGNSQNLNNSATTLGKVEPGMCSTSQTPSVFQGIPTSIQISQLQPGKPSTVEKEFNPINGGSGFTLTNNSMSTSPLVLQGNSTQIPSRRGFGAESSAKVASLSQDSFDIGINSSNNLDHNRSNKNWNHAVQMSSFSLNPFENYAHDQLTSNNMSISSTHSSIGRVPVDYSSTCADLDPTQDSSGDRYQEGLIGNIVQTMNVLPKRRLEENRQGFHQNMNHSYAAVDCMGSFGFLGSSMGQNNTAGRKVFDVSFSNQLITGGTPLYAQHGNNLLHQAKSQDGAVQSNYESFEDVMNAMIKQEQNETSMMEGGFGFNTYSLGL 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15145143 15148663 - BLOR20700 Blo08g00530 64482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00530 667 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Blo08g00530 667 MobiDBLite consensus disorder prediction 150 177 - -
Blo08g00530 667 Coils Coil 182 202 - -
Blo08g00530 667 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 267 IPR017930 -
Blo08g00530 667 PIRSF RR_ARR_type-B 4 665 IPR017053 GO:0003677|GO:0003700|GO:0009736
Blo08g00530 667 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 650 IPR045279 GO:0009736
Blo08g00530 667 Gene3D - 24 162 - -
Blo08g00530 667 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 650 - -
Blo08g00530 667 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Blo08g00530 667 CDD REC_typeB_ARR-like 26 140 - -
Blo08g00530 667 Pfam Myb-like DNA-binding domain 213 263 IPR001005 -
Blo08g00530 667 Gene3D - 207 270 - -
Blo08g00530 667 SUPERFAMILY Homeodomain-like 208 268 IPR009057 -
Blo08g00530 667 SMART REC_2 24 136 IPR001789 GO:0000160
Blo08g00530 667 MobiDBLite consensus disorder prediction 150 211 - -
Blo08g00530 667 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 211 264 IPR006447 GO:0003677
Blo08g00530 667 SUPERFAMILY CheY-like 23 147 IPR011006 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00600 Blo08g00530 CCT
Blo08g00530 Blo16g00870 CCT
Blo01g00600 Blo08g00530 ECH
Blo08g00530 Blo16g00870 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00600 Blo-Chr1:6592662 Blo08g00530 Blo-Chr8:15145143 1.76E-152 dispersed
Blo03g00110 Blo-Chr3:3439388 Blo08g00530 Blo-Chr8:15145143 8.68E-30 dispersed
Blo08g00530 Blo-Chr8:15145143 Blo12g00090 Blo-Chr12:6259518 1.80E-104 dispersed
Blo08g00530 Blo-Chr8:15145143 Blo16g00870 Blo-Chr16:36260074 2.50E-167 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12738 PF00072 Response_reg 2.20E-26 CL0304 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00530 K14491 - qsu:112019876 721.85