Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00559 ATGTCTTCGACATCTGGAAGTAGCAGCGCAACGCGTGTGGGAAAGTATGCATTAGGCCGAACTCTGGGCGAAGGTAACTTCGCCAAGGTTAAATTTGCTCGTAACATGGAGAGCGGCCAGAATGCGGCGATCAAAATCTTTGATAAGGAGAAACTTTTAAAGCACAAGATGATAGACCAGGTTAAAAGAGAAATATCAACAATGAAACTAATCAGACATCCTAATGTGATGGCTAGCAAGACCAAAATTTACATTGTCATGCAATTTGTTACTGGTGGAGAATTGTTTGACAGAATTGCGAGTAAAGGGAGATTTAAAGAAGATGAGGGAAGGAAGTACTTTCAGCAGCTTATTAATGCTGTAGATTATTGTCATAGCAGAGGTGTTTTTCATAGGGACCTTAAGCCTGAAAATTTGTTGCTCGATTCTAATGAAGTTCTTAAAGTTTCTGACTTTGGGTTGAGTGCTCTACCTCAGCAAGTTCGAACGGAATTAAGAAAGAGCACCGCATACCACCCACAAACGGATGGGCAAACAGAGGCAGTAAATAGGATGCTAGCTCCTCGATTCTATGGTCCCTTTCAAGTATTACAAAAGTGGGAAAAGTGGCATACAAGCTATGGAGATGGACTGCTTTACACAACATGCGGAACGCCAAATTATGTTGCCCCAGAGGTGATCAATAACAAAGGCTATGATGGAGCAAAGGCAGATCTGTGGTCATGTGGTGTAATTCTTTTTGTCCTAATGGCTGGTTACCTGCCCTTCGAAGATTCCAACCTCACAACATTGTACATAAAGATACGTAAAGCTGAGTTCAGTTGCCCGTCATGGTTTTCGACGGGTGCCAAGAAATTAATCAAGAGAATTTTGGATCCCAACCCCTCAACTCGAATTTCCATTGCTGAGGTTATTGAGAATGAATGGTTTAAGAAAGGATATAAACCACCTGTTTTTGAACATGCTGCTGTTAGTTTTGATGATGTTGACGCTATCTTCAATGAATCAGGGGATACACATAACCTTGTTCTAGAGAGCAGAGAAGAAGGGCCTATGGCTCCTGCCACCATGAATGCTTTTGAGCTTATCTCTACATCTCGGGGTCTCAACCTTGGCAGACTTTTTGAGAAGCAAATGTATTACAGGTATCCTCATATACAGAAAAACGAGGTTGAAAGACTAATTTTTGAAATGCTTGCTGCAGGAATTATTATTGTGTCCGACCGAGACAAGGTTTTCCTGAGTCTATTTTGGAAGGGACTATTCAAGGCTCAAGCAGGACTTGTCAAATGTGAAACGAGGTTCACATCCAACTGTCCTGTTAATGAGATCATTTCCAAGATTGACGTTGTTGCAACTCACTTGGGATTTAATGTGAAGAGAAATAACTTCAAGATGAAACTTCAAGGAGGCAACTCTGGTCGGAAAGGTCATTTATTAGTTGTAACTGAGATTTATGAAGTTGTCCCTTCGCTTTACATGGTTGAAGTTTGCAAGTCTGGTGGAGACACTTTAGAATTTCACAAGGTATATGAACAACTATTACCCTAA 1551 41.01 MSSTSGSSSATRVGKYALGRTLGEGNFAKVKFARNMESGQNAAIKIFDKEKLLKHKMIDQVKREISTMKLIRHPNVMASKTKIYIVMQFVTGGELFDRIASKGRFKEDEGRKYFQQLINAVDYCHSRGVFHRDLKPENLLLDSNEVLKVSDFGLSALPQQVRTELRKSTAYHPQTDGQTEAVNRMLAPRFYGPFQVLQKWEKWHTSYGDGLLYTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILFVLMAGYLPFEDSNLTTLYIKIRKAEFSCPSWFSTGAKKLIKRILDPNPSTRISIAEVIENEWFKKGYKPPVFEHAAVSFDDVDAIFNESGDTHNLVLESREEGPMAPATMNAFELISTSRGLNLGRLFEKQMYYRYPHIQKNEVERLIFEMLAAGIIIVSDRDKVFLSLFWKGLFKAQAGLVKCETRFTSNCPVNEIISKIDVVATHLGFNVKRNNFKMKLQGGNSGRKGHLLVVTEIYEVVPSLYMVEVCKSGGDTLEFHKVYEQLLP 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18575560 18594235 + BLOR20729 Blo08g00559 64511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00559 516 ProSiteProfiles NAF domain profile. 352 376 IPR018451 GO:0007165
Blo08g00559 516 SUPERFAMILY Protein kinase-like (PK-like) 13 324 IPR011009 -
Blo08g00559 516 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 10 160 - -
Blo08g00559 516 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Blo08g00559 516 Pfam Protein kinase domain 16 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00559 516 CDD CIPK_C 358 515 - -
Blo08g00559 516 Gene3D Phosphorylase Kinase; domain 1 5 89 - -
Blo08g00559 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Blo08g00559 516 Gene3D Kinase associated domain 1, KA1 352 516 - -
Blo08g00559 516 SMART serkin_6 16 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00559 516 PANTHER SERINE/THREONINE KINASE 409 514 - -
Blo08g00559 516 PANTHER SERINE/THREONINE KINASE 10 160 - -
Blo08g00559 516 PANTHER SERINE/THREONINE KINASE 206 340 - -
Blo08g00559 516 Pfam NAF domain 420 460 IPR004041 GO:0007165
Blo08g00559 516 Pfam NAF domain 354 383 IPR004041 GO:0007165
Blo08g00559 516 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 409 514 - -
Blo08g00559 516 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 206 340 - -
Blo08g00559 516 ProSiteProfiles Protein kinase domain profile. 16 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00559 516 Gene3D Transferase(Phosphotransferase) domain 1 90 317 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00304 Blo-Chr2:3068255 Blo08g00559 Blo-Chr8:18575560 0 dispersed
Blo08g00559 Blo-Chr8:18575560 Blo14g00768 Blo-Chr14:23351266 1.46E-153 dispersed
Blo08g00559 Blo-Chr8:18575560 Blo03g01518 Blo-Chr3:42071254 1.84E-161 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84452 PF00069 Pkinase 2.50E-61 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00559 - - mnt:21394696 641.343