Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00601 ATGGCGGAACCCAATATCAAGAGTAGCAGCGAGAGCAAGAAGAAGGATTACCCGGCTCTTCTTTTGGGCAGATACGAGATCGGGAAGCTCCTCGGCCATGGTACCTTCGCCAAGGTCTACCACGCAAAAAACGTCAGATCGAACGAAAGCGTCGCTATTAAAGTTCTTGATAAGGAGAAGATTCTAAAGGGTGGCCTTATTGCTCATATCAAGAGGGAGATCTCGATTCTCCGCCGCGTTCGCCACCCTAATATAGTTCAGCTGATCGAGGTTATGGCGACTAAGGCCAAGATCTTCTTCGTTATGGAGTATGTTCGGGGTGGAGAGCTATTCAAAAAGGTCGCTAAAGGTCGGTTAAAAGAAGAAGTTGCTCGGAAATATTTTCAGCAATTGATTTCAGCCGTCGGATTCTGCCACGCCCGCGGTGTGTATCACCGGGACCTTAAGCCGGAGAACCTTTTACTTGATGATAATGGAGATCTCAAAGTCTCCGATTTTGGGTTAAGCGCAGTCTCCGATCAGATTCGGCAGGACGGTTTGTTTCACACGTTTTGTGGAACGCCAGCGTATGTTGCGCCGGAGGTTTTGGCCAGAAAAGGGTACGAAGCGGCGAAGGTGGATATTTGGTCTTGTGGGGTTATACTTTTTGTTCTTATGGCTGGCTATTTACCATTTCACGATCAAAATGTAATGGCGATGTACAAGAAAATTTACAAGGGCGAGTTTCGATGTCCGAGATGGTTCTCGCCGGAGCTAATTCGCCTCCTTTCACGGCTTCTCGATACAAATCCAGAGACCCGAATCACCATTCCTGAAATTATGGAGAACAAATGGTTCAAGAAAGGATTCAAGCATATAAAATTTTATATCGAAGATGATAAGCTTTGCAGTGTTCATGATGAGATCGATGATGCTGATTCACTATCCGAACAATCAATGTCGGAATCAGAAACAGAAATGGAGCCTAGAAGGAGGATAACTTCGTTGCCTAGGCCAGCAAGTTTGAACGCATTTGACATTATATCATTTTCGCCCGGTTTTGATCTTTCGGGATTGTTCGAAGATGGGGGAGAAGAGTCGAGGTTTATCTCTGGTGCCCCTGTGTCAAAAATTATATCAAAATTAGAGGAAATTGCTCAGTTGGTGAGCTTCACAGTGAGGAAGAAGGATTGCAGAGTGAGCTTGGAGGGCTCTAGAGAAGGTATAAAGGGTCCATTGACAATTGCAGCGGAGATTTTCGAATTAACTCCATCATTAGTTATGGTGGAAGTTAAAAAGAAAGGTGGAGATAATGCTGAGTATGAACACTTCTGCAACAGCGAATTGAAACCCGGATTGCAGAATTTGATGATGGAAGTGAAGGAATCTGCAGCTTCTTCGCACTTGCCTTCAGATACTGAATAA 1404 44.8 MAEPNIKSSSESKKKDYPALLLGRYEIGKLLGHGTFAKVYHAKNVRSNESVAIKVLDKEKILKGGLIAHIKREISILRRVRHPNIVQLIEVMATKAKIFFVMEYVRGGELFKKVAKGRLKEEVARKYFQQLISAVGFCHARGVYHRDLKPENLLLDDNGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYEAAKVDIWSCGVILFVLMAGYLPFHDQNVMAMYKKIYKGEFRCPRWFSPELIRLLSRLLDTNPETRITIPEIMENKWFKKGFKHIKFYIEDDKLCSVHDEIDDADSLSEQSMSESETEMEPRRRITSLPRPASLNAFDIISFSPGFDLSGLFEDGGEESRFISGAPVSKIISKLEEIAQLVSFTVRKKDCRVSLEGSREGIKGPLTIAAEIFELTPSLVMVEVKKKGGDNAEYEHFCNSELKPGLQNLMMEVKESAASSHLPSDTE 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 21851254 21852657 - BLOR20771 Blo08g00601 64553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00601 467 ProSiteProfiles NAF domain profile. 330 354 IPR018451 GO:0007165
Blo08g00601 467 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 18 458 - -
Blo08g00601 467 CDD CIPK_C 336 447 - -
Blo08g00601 467 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Blo08g00601 467 SMART serkin_6 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00601 467 PANTHER - 18 458 - -
Blo08g00601 467 Pfam NAF domain 332 388 IPR004041 GO:0007165
Blo08g00601 467 ProSiteProfiles Protein kinase domain profile. 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00601 467 MobiDBLite consensus disorder prediction 306 325 - -
Blo08g00601 467 Pfam Protein kinase domain 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00601 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Blo08g00601 467 SUPERFAMILY Protein kinase-like (PK-like) 21 327 IPR011009 -
Blo08g00601 467 Gene3D Kinase associated domain 1, KA1 331 451 - -
Blo08g00601 467 Gene3D Transferase(Phosphotransferase) domain 1 15 330 - -
Blo08g00601 467 CDD STKc_SnRK3 24 278 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00856 Blo-Chr1:15824251 Blo08g00601 Blo-Chr8:21851254 0 dispersed
Blo08g00601 Blo-Chr8:21851254 Blo14g00880 Blo-Chr14:33049032 0 dispersed
Blo14g00057 Blo-Chr14:365914 Blo08g00601 Blo-Chr8:21851254 8.71E-164 dispersed
Blo08g00600 Blo-Chr8:21849200 Blo08g00601 Blo-Chr8:21851254 5.22E-179 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84454 PF00069 Pkinase 2.90E-74 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00601 - - csv:101214053 803.897