Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo08g00626 | ATGCGGCCCGGGTTCGCGTCGACTCTGGCCGGCGATGTGTTCGGCCACGGGATTGAGGTAAGCCTACCCGATTCTATCCTCCTTTACATTCCAGATCTAGCCAGAGGTCCGATTCATGAGATGAATCGGAGGTACTTCACGTTGGCAGGGCCGATTTCCGTTGAAGCGGTATCGGAGTTGAAGAACTTGTATGCTGAATTTCGACAGACGTTAGGTAACGAGGGAGTTATGCCAGCAATTAAGGAAGAGGACATTCCGGTGGAGCCTGCGGTTGGCCCATTTCAAGGTAATGTTGTATTTGGCGGGAAACTTGGCGCCAAAGAAGAGCTAGGACTAGCAAAGGCTGACTCTCCTTCCTCCTTCCCCCTTCCCTCATCCCTTCCTCGTTTCATCGCTTCTGCGTTCGTAATGGAGAGCTTCGGAGGTGGTGGTTATTTCGTCGATGACAAGGCTGCTAGTGTCGAGAACATTTTCCTCGACTTTCTCAACAACTTTCGTCTCGGTGGCCGTTCAGGGGAAGCCTATTACGATGCTGAGATTGAAGCCATGAAGGCCTCTGAATCCACCACCATGTTCATCGATTTCTCACACCTCATCCGCTTCAACGATATCCTTCACGTTGCCATCTCTGAAGAATACTTGAGGTTTGAACGCTACTTGAAGAATGCTTGCAAGCGATTCGTGATGGAAAAGAAGCCCACCTTTATAGCTGATGAAAACCTCGGCAAGGACATCAATGTTGCTTTTTTTAACATCCCCGTTTGTAAGAGGTTGAGGGAGTTGACTACAGCAGAAATTGGCAAACTAGTATCAGTGACAGGGGTTGTAACTCGTACAAGTGAGGTTCGACCAGAACTTATCCAGGGGACCTTTAAGTGCCTTATATGTGGAGGTGTGATAAAGAACATTGAACAGCAATTCAAGTATACAGAGCCAACAATTTGCATGAGTCCTACATGTACAAATAGAACGAAATGGGCATTATTGCGGCAAGAGAGCAAATTTGCTGACTGGCAAAGGGTACGAATGCAAGAGACTTCCAAGGAGATACCAGCAGGATCTCTTCCTCGATCATTGGATGTAATTCTTCGTCATGAGATGGTCGAGCGAGCCCGGGCAGGAGACACGGTTGTTTTCACGGGTACAGTAGTTGTGATACCAGACATACTTGCACTAGCCTCTCCTGGTGAAAGGGCAGAAACCCGACGTGAAGGTTCCCAACGACAAAGTTCTACTGTTGGACATGAAGGAATGAGAGGCCTTAAAGCTCTTGGAGTGAGAGACCTGTCATATCGACTAGCTTTCATTGCCAATTCAGTTCAAATTGCTGAAGGTAGGAGAGACACTGATATCAGGAATAGGAAAAGGGAAAGTGATGAAGAACAACAGCAATTTACAGCTGAAGAGCTTGATGAAGTCCAAAGGATGAGGAATACGCCAGATTTCTTAAATAAACTCGTTGAGAGTATTGCACCAACAGTCTTTGGTCACCAAGATATCAAGCGAGCTATCTTGCTTATGCTTCTAGGTGGAGTTCACAAGTATACTCATGAAGGCATCAATCTGAGAGGAGATATTAATGTTTGCATCGTAGGAGATCCAAGCTGTGCAAAATCTCAATTCCTGAAGTACACTTCGGGTATAGTTCCAAGATCTGTTTATACGTCTGGAAAATCCTCTTCGGCAGCAGGGTTGACTGCAACTGTAGCAAAAGAACCTGAAACTGGGGAATTTTGTATTGAGGCTGGTGCTTTAATGCTTGCTGACAATGGGATTTGTTGTATTGATGAATTTGATAAAATGGATATTAGGGATCAGGTTGCAATTCATGAAGCCATGGAACAGCAAACTATAAGCATTACCAAAGCTGGAATACAAGCAACACTGAATGCTCGTACATCAATTCTTGCTGCTGCTAATCCTGCAGGTGGACGATACGACAAATCTAAACCATTGAAGTATAACGTGGCTCTTCCACCTGCCATTCTCTCAAGGTTTGACCTGGTATACGTTATGATTGATGATCCAGATGATCAAACAGACTACCACATTGCTCACCACATCGTCAGAGTACATCAGAAGCATGAAAATGCTCTTTCTCCTGCATTTTCTACTGCAGAGCTTAAGAGATATATTGCATATGCAAAAACTTTAAAACCCAAGCTAAGCTCAGATGCTAGGAAATTGTTGGTCGAATCTTATGTTGCTTTACGTAGAGGAGATACCACTCCTGGTAGTAGAGTTGCGTATCGCATGACTGTTAGACAACTTGAGGCATTGATCAGACTATCGGAAGCCATTACTCGAAGTTATTTGGAAACTTTGGTATGTTTTGACAAATTTCATTCACTATATCTTGAACTTTGTCGTCTCCCATTCAGTGTGGAGTCCAGTGAGATTGATCTCTCGGAGTTTCAAGAAAAAAACAATGTTGGTGACAATAATGTAGATAGTGCGGATGGTAATGCTAACCAAGATGATTCTCAACCAAGTAATGATCCAGTTTCAGGAAACGGTGCAGATCGAGAAGGAAAGAAACTTGTTATAAGTGATGAATATTTTCAGCGGATCACCCAAGCCCTCGTTATGCACCTTAGGCAGCATGAAGAAACTGTAATGCAAGAAGGAACTGGTCTGGCAGGAATGAGACAGAGAGACTTGATTAAATGGTACGTGGATCAGCAGCATGCGAAAAATAAATATAGCTCCGAGGTGGAGGTTATAAACGAAGTGTCTAAAATTAAAGCTATTATTGAGAGTTTAATACGAAGGGAAGGGCATTTGATAGTGGTGGACGAGGGCAGGCCAGTTACAGAGGGTGGAGTTGCAGGACAATCAAGTAGAAATGACAGAATTTTAGCTGTTGCTCCCAACTATGTAATTGATTAA | 2889 | 44.03 | MRPGFASTLAGDVFGHGIEVSLPDSILLYIPDLARGPIHEMNRRYFTLAGPISVEAVSELKNLYAEFRQTLGNEGVMPAIKEEDIPVEPAVGPFQGNVVFGGKLGAKEELGLAKADSPSSFPLPSSLPRFIASAFVMESFGGGGYFVDDKAASVENIFLDFLNNFRLGGRSGEAYYDAEIEAMKASESTTMFIDFSHLIRFNDILHVAISEEYLRFERYLKNACKRFVMEKKPTFIADENLGKDINVAFFNIPVCKRLRELTTAEIGKLVSVTGVVTRTSEVRPELIQGTFKCLICGGVIKNIEQQFKYTEPTICMSPTCTNRTKWALLRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHEMVERARAGDTVVFTGTVVVIPDILALASPGERAETRREGSQRQSSTVGHEGMRGLKALGVRDLSYRLAFIANSVQIAEGRRDTDIRNRKRESDEEQQQFTAEELDEVQRMRNTPDFLNKLVESIAPTVFGHQDIKRAILLMLLGGVHKYTHEGINLRGDINVCIVGDPSCAKSQFLKYTSGIVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDIRDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPAGGRYDKSKPLKYNVALPPAILSRFDLVYVMIDDPDDQTDYHIAHHIVRVHQKHENALSPAFSTAELKRYIAYAKTLKPKLSSDARKLLVESYVALRRGDTTPGSRVAYRMTVRQLEALIRLSEAITRSYLETLVCFDKFHSLYLELCRLPFSVESSEIDLSEFQEKNNVGDNNVDSADGNANQDDSQPSNDPVSGNGADREGKKLVISDEYFQRITQALVMHLRQHEETVMQEGTGLAGMRQRDLIKWYVDQQHAKNKYSSEVEVINEVSKIKAIIESLIRREGHLIVVDEGRPVTEGGVAGQSSRNDRILAVAPNYVID | 962 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 24697458 | 24710396 | - | BLOR20796 | Blo08g00626 | 64578 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo08g00626 | 962 | CDD | MCM6 | 485 | 776 | - | - | |
Blo08g00626 | 962 | ProSiteProfiles | MCM family domain profile. | 482 | 688 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Blo08g00626 | 962 | Pfam | MCM OB domain | 258 | 386 | IPR033762 | - | |
Blo08g00626 | 962 | SUPERFAMILY | Nucleic acid-binding proteins | 158 | 388 | IPR012340 | - | |
Blo08g00626 | 962 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 147 | 915 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Blo08g00626 | 962 | PRINTS | Mini-chromosome maintenance (MCM) protein 6 signature | 417 | 438 | IPR008049 | GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
Blo08g00626 | 962 | PRINTS | Mini-chromosome maintenance (MCM) protein 6 signature | 358 | 369 | IPR008049 | GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
Blo08g00626 | 962 | PRINTS | Mini-chromosome maintenance (MCM) protein 6 signature | 255 | 267 | IPR008049 | GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
Blo08g00626 | 962 | PRINTS | Mini-chromosome maintenance (MCM) protein 6 signature | 305 | 322 | IPR008049 | GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
Blo08g00626 | 962 | Gene3D | - | 285 | 336 | - | - | |
Blo08g00626 | 962 | Gene3D | - | 258 | 386 | IPR012340 | - | |
Blo08g00626 | 962 | MobiDBLite | consensus disorder prediction | 806 | 836 | - | - | |
Blo08g00626 | 962 | MobiDBLite | consensus disorder prediction | 396 | 416 | - | - | |
Blo08g00626 | 962 | Pfam | MCM6 C-terminal winged-helix domain | 845 | 961 | IPR041024 | - | |
Blo08g00626 | 962 | ProSitePatterns | MCM family signature. | 591 | 599 | IPR018525 | GO:0003677|GO:0005524|GO:0006260 | |
Blo08g00626 | 962 | Pfam | MCM N-terminal domain | 157 | 251 | IPR027925 | - | |
Blo08g00626 | 962 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM6 | 147 | 915 | - | - | |
Blo08g00626 | 962 | Pfam | MCM P-loop domain | 470 | 692 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Blo08g00626 | 962 | Gene3D | - | 843 | 962 | - | - | |
Blo08g00626 | 962 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 662 | 670 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Blo08g00626 | 962 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 583 | 597 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Blo08g00626 | 962 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 611 | 624 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Blo08g00626 | 962 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 523 | 538 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Blo08g00626 | 962 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 635 | 647 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Blo08g00626 | 962 | SMART | mcm | 254 | 794 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Blo08g00626 | 962 | Gene3D | - | 460 | 780 | IPR027417 | - | |
Blo08g00626 | 962 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 492 | 769 | IPR027417 | - | |
Blo08g00626 | 962 | Pfam | MCM AAA-lid domain | 707 | 776 | IPR041562 | - | |
Blo08g00626 | 962 | Gene3D | - | 146 | 254 | - | - | |
Blo08g00626 | 962 | MobiDBLite | consensus disorder prediction | 806 | 842 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo08g00626 | Blo-Chr8:24697458 | Blo10g00430 | Blo-Chr10:7793506 | 4.06E-109 | dispersed | |
Blo08g00626 | Blo-Chr8:24697458 | Blo17g00098 | Blo-Chr17:774926 | 3.04E-06 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo08g00626 | K02542 | - | jre:108993888 | 1301.96 |