Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00021 ATGGGAATGAACGCAGGAGAGTTTAGAGAGAGAGGGGAAAGTGGTTGGTTGGAGAGAGGAAGTATGGCGTGGAATGGTGCAGAAAAAGAAGGGACTGCAGTAAACAGCTCCATTTCTTTAAAGCTGTCTTTGTTTTCTCTTCCGATCAGCCAACCATCTGAGCCTTCAGGAGTGCGAACGCCACCGCTCTACTCCTCTCTGTCCGTTCCATTCCAGTGGGAAGAAACTCCAGGAAAAGCAAGATTCTGTCCCACAGACCCCATAGCTAGCGCCGCCATTGTTAGATCCTTGGAGCTTCCCCCTAGGCTGCTCAACGAGGCAAGGGTTTCCAACATTCTCTCCCCAACAACAGTTTTAGAAGGGCCATACTCGAGCAAGAATGCGTTTTCCTCAGCGTCATTCCGCAGCTCCGATGGTTGGTCAAAGAGAGACGACAATGGTACCCATTTTGGTTCGAAGAGGTGGGGCGGTTTCAGGAAGAATTGCAGGGACTTGGGTAGGGGTAGTTTGGACCTGCTACCATCCGTGGGGGGAAGAGGAGGAGAGGCAAGCAGCTCCGGCGGCGGTGATGGTAGAGTGACGATCAGCAGGGAAAAGAAGAGAGGCGGGCTGTTCAATCTCTCAAATTACACGTCCTCACATTTTCTACGGATAAGAAATTCCCAGCTCAAGTTCTTGCTCATGGCGACTCTGACTACAGCTTATACAGTCCCCATTTCACGAGAAGGATCTAACTTTGACGAGGTTTCTATGCATCAGAGCATGCTTTTCTCTGATTGTCTGAAGGATTTGAAGAATTTGAAAGCACAGCTTTACTCAGCGGCCGAGTATTTTGAGTTATCTTACACCAACGACAACCAAAAACAGATAGTGGTAGAAACTTTGAAAGATTATGCAGTTAAAGCTCTTGTCAATACAGTAGACCATTTGGGGTCTGTGACGTACAAGGTTAACGATCTTTTGGACGAAAAAGCAGACCAAGTATTGGGGACGGAGCTTAGAGTATCCTGTATCGAACAGAGATTGAAGACATGCCAAGAGTTCATGGATCACCAAGGCATTTCCCAACAATCACTTACCATAAACACTCCCAAATACCATAAGCGATACATTTTACCCGGCAAGTGTTATTTGTTCTTCTTTATCGGTTCTCGATTCGATTATGAAGATAAAGATCTTGGGTGTTTGAATTCTCGCTCAGTTGGGGATACGATGAACGCAGCCAATCACAGCAAATCGAAATACCAAGGACGGAGCCTAGAAGATGAAGATGAGTGGCATCAATTTAGAACTGTCCGCGCTACGATCCGAGAAACGCCAACCTCCATGGCCAGTAAAGGACGTTTCTCATCGCCTTCTCAACAGCCGTCCCCACAACCTAAAACCTTTGCATTTACGTCTACGATGCCAAGGAAGGAAACTGATGGTGAACTTAGTATTACGCGGATAATAAATTTTATATTTTTCATCTTTTTGACATGTTATCCGTCGCAGCCGAGAAAATCAGCATCTATGCGGATGCCTGCCGAGAAGGAGAATGGGAAGGATTATGAACAGAATCCGAGCAAAAGTAAACGCCTTCTAAAAGCATTGCTCAGCCGTCGGAAATCGAAAAAAGACGAAATGCTGTACACTTATCTGGATGAATACTAA 1653 46.1 MGMNAGEFRERGESGWLERGSMAWNGAEKEGTAVNSSISLKLSLFSLPISQPSEPSGVRTPPLYSSLSVPFQWEETPGKARFCPTDPIASAAIVRSLELPPRLLNEARVSNILSPTTVLEGPYSSKNAFSSASFRSSDGWSKRDDNGTHFGSKRWGGFRKNCRDLGRGSLDLLPSVGGRGGEASSSGGGDGRVTISREKKRGGLFNLSNYTSSHFLRIRNSQLKFLLMATLTTAYTVPISREGSNFDEVSMHQSMLFSDCLKDLKNLKAQLYSAAEYFELSYTNDNQKQIVVETLKDYAVKALVNTVDHLGSVTYKVNDLLDEKADQVLGTELRVSCIEQRLKTCQEFMDHQGISQQSLTINTPKYHKRYILPGKCYLFFFIGSRFDYEDKDLGCLNSRSVGDTMNAANHSKSKYQGRSLEDEDEWHQFRTVRATIRETPTSMASKGRFSSPSQQPSPQPKTFAFTSTMPRKETDGELSITRIINFIFFIFLTCYPSQPRKSASMRMPAEKENGKDYEQNPSKSKRLLKALLSRRKSKKDEMLYTYLDEY 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 251786 257103 - BLOR20936 Blo09g00021 64648

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00021 550 Gene3D - 246 348 - -
Blo09g00021 550 PANTHER ABL INTERACTOR FAMILY MEMBER 240 550 IPR028457 -
Blo09g00021 550 MobiDBLite consensus disorder prediction 440 462 - -
Blo09g00021 550 MobiDBLite consensus disorder prediction 501 525 - -
Blo09g00021 550 MobiDBLite consensus disorder prediction 505 523 - -
Blo09g00021 550 MobiDBLite consensus disorder prediction 176 195 - -
Blo09g00021 550 PANTHER PROTEIN ABIL3 240 550 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00021 - - - jre:109007570 379.407
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00021 Blo-Chr9:251786 Blo19g00224 Blo-Chr19:11254696 1.46E-15 dispersed
Blo09g00021 Blo-Chr9:251786 Blo16g00449 Blo-Chr16:17785464 5.30E-41 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g1031 . . . Bda07g01938 Bpe03g00193 . . . Cmo16g00048 . . . . . . . Cpe14g00033 Bhi01g01500 . . . . . . . . . . . . . Cone1ag0991 Cone5ag0696 . . . . . Cme06g01152 . Blo09g00021 . . . . . . . . . Cma16g00040 . . Car18g01239 . . . . . . . . . Cla05g00976 Cam05g1069 Cec05g1075 Cco05g1067 Clacu05g1061 Cmu05g1012 Cre05g1088 . Csa03g01977 Chy06g01190 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004623 1 4 1 1 1 1 1 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 3 2 2 42
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo09g00021 Blo_Chr09 FPKM 22.082743 25.779238 21.552736 16.849466 16.432741 17.946426 14.228746 18.899288 21.657703 18.506538