Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00029 ATGGGCTATGGAAAGCTAAAGCCGTCCGACCCAGGAGGGTCGCCCTTCAACCAATTTGGAGCCTCCCCCTCGCATCCTCCTCCACCACGTAGCAGGAGGAAGAAGCTCCTCATTTTGTCCTTTCTCTCTGTTATCCTACTCATCGCTGCCGTCGTCTCTGCCGTTCTCCTCGTCGGTCTTCGAACTAAGACTCCGGGTCGACCCGACATCAATCTCCCTCGTAAACCGACGCAGGCTATTTCTCGGACCTGCAGCCGAACTCGGTTCCCGACTCTATGTCTCAACTCACTAGCCGCCTTCCCCGGCTCTGAGAGTGCCACCGAGGACGACCTCGTCCACATTTCGTTCAACATGACGCTGCAGCATTTCTCCAGGGCCCTCTACGTCTCCACCGGAATCTCCAATTTTCCGATGAATTCTCTCGTCCGATCTGCCTACCAAGATTGCCTGGAGCTCCTCGAAGATTCGATCGACGCGCTCGCTCGCTCACTGTTCTCCGTCGCACCACTTCCGGGCGAGGATGCTCAAACTGTTGGCTCCACTCACGACATCCTCACTTGGCTCAGCGCCGCTCTGACCAACCAAGACACCTGTATGGAAGGATTCGAAGATGTTATCGGAACTGTGAAGAATCAAATGACTGAGGGTCTCCGCGATTTGTCGGAGCTAGTAAGCAACTGCCTGGCCATTTTTTCCGGCACCGACTCCAGCGATTTTGCTGGCGTGCCTATTCAGAACAGGCGTAGGCTAATGGAAGCCGCGGATACATTGGACGAAAAGGAAGAGCAATCGGAGGAATTTCCGAGATGGATGAGTCGGAAAGAGAGAAAATTACTGAGTTTGCCTGTGTCGGCGATTCAAGCAGACATTATAGTGTCCAAGGATGGAAACGGAACTTGCAAAACATTAACGGAGGCGATCAAGAAGGTGCCCGAGAACAGCGATCGGCGAACGATAATTTACGTGATGGCAGGAAAGTACGAAGAAGATAATTTAAAGGTGGGAAGGAAAAAGACGAACATAATGTTCATCGGAGATGGAAAGGGCAAAACGGTCATATCGGGTGGCAAAAGTGTGTTCGATGAGATGACGACATTTCACACAGCCACCTTTGCCGCAACGGGAGCGGGAGTGATTTTAAGGGACATTACGTTCGAGAATTGGGCAGGACCGAGCAAGCACCAAGCGGTGGCCCTCCGTATCGGAGCCGACCATGCAGTTGTCTATCGATGCAACATCATTGGCTACCAAGACACCCTATACGTGCACTCTAATCGTCAGTTCTTTCGAGAATGCGACATTTACGGAACCGTTGATTTCATTTTCGGCAACGCTGCAGTCGTGTTTCAAAATTGCACTATTTACGCTCGAAAGCCCATGCCTCTACAAAAGAACACTATCACGGCCCAAAACCGAAAAGATCCAAACCAAAACTCGGGCATTTCAATCCATGCTTGTCAGATTGTGGCCACCTCCGATCTCGAGCTGTCAAAGGGTAGCTTACCGACATATCTCGGTCGACCGTGGAAACTATACTCTAGGACCGTGTACATGTTATCATTCATGGGGGATCATGTACATCCTAGAGGATGGCTAGAATGGAATGCAACATTTGCATTAGACACGTTGTACTACGGTGAATACATGAACTACGGTCCTGGTGGAGCGGTGGGTCAACGGATTGCTTGGCCAGGATATCGAGTCATTACATCGACCATCGAAGCAAGTAAGTTCACGGTAGCTCAATTTATATACGGGTCATCATGGCTACCATCCACCGGAGTTGCGTTCTTGGCCGGACTATCGAACTAG 1812 50.88 MGYGKLKPSDPGGSPFNQFGASPSHPPPPRSRRKKLLILSFLSVILLIAAVVSAVLLVGLRTKTPGRPDINLPRKPTQAISRTCSRTRFPTLCLNSLAAFPGSESATEDDLVHISFNMTLQHFSRALYVSTGISNFPMNSLVRSAYQDCLELLEDSIDALARSLFSVAPLPGEDAQTVGSTHDILTWLSAALTNQDTCMEGFEDVIGTVKNQMTEGLRDLSELVSNCLAIFSGTDSSDFAGVPIQNRRRLMEAADTLDEKEEQSEEFPRWMSRKERKLLSLPVSAIQADIIVSKDGNGTCKTLTEAIKKVPENSDRRTIIYVMAGKYEEDNLKVGRKKTNIMFIGDGKGKTVISGGKSVFDEMTTFHTATFAATGAGVILRDITFENWAGPSKHQAVALRIGADHAVVYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVFQNCTIYARKPMPLQKNTITAQNRKDPNQNSGISIHACQIVATSDLELSKGSLPTYLGRPWKLYSRTVYMLSFMGDHVHPRGWLEWNATFALDTLYYGEYMNYGPGGAVGQRIAWPGYRVITSTIEASKFTVAQFIYGSSWLPSTGVAFLAGLSN 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 358877 360979 - BLOR20944 Blo09g00029 64656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00029 603 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 233 IPR035513 -
Blo09g00029 603 Pfam Pectinesterase 289 586 IPR000070 GO:0030599|GO:0042545
Blo09g00029 603 ProSitePatterns Pectinesterase signature 2. 434 443 IPR033131 -
Blo09g00029 603 MobiDBLite consensus disorder prediction 1 30 - -
Blo09g00029 603 PANTHER PECTINESTERASE 29 601 - -
Blo09g00029 603 CDD PMEI-like_3 84 232 - -
Blo09g00029 603 SUPERFAMILY Pectin lyase-like 284 600 IPR011050 -
Blo09g00029 603 SMART PMEI_2 75 230 IPR006501 GO:0004857
Blo09g00029 603 Gene3D - 283 601 IPR012334 -
Blo09g00029 603 TIGRFAM PME_inhib: pectinesterase inhibitor domain 52 232 IPR006501 GO:0004857
Blo09g00029 603 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 232 IPR035513 -
Blo09g00029 603 Pfam Plant invertase/pectin methylesterase inhibitor 79 230 IPR006501 GO:0004857
Blo09g00029 603 PANTHER PECTINESTERASE 29 601 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g01091 Blo09g00029 CCT
Blo07g00338 Blo09g00029 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00810 Blo-Chr7:25995500 Blo09g00029 Blo-Chr9:358877 6.88E-153 dispersed
Blo09g00029 Blo-Chr9:358877 Blo16g00613 Blo-Chr16:24726464 1.93E-147 dispersed
Blo17g00654 Blo-Chr17:15447297 Blo09g00029 Blo-Chr9:358877 1.32E-138 transposed
Blo06g01091 Blo-Chr6:34203091 Blo09g00029 Blo-Chr9:358877 8.92E-145 wgd
Blo07g00338 Blo-Chr7:4366211 Blo09g00029 Blo-Chr9:358877 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00029 - - zju:107414790 889.797