Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00036 ATGGTATGCAGCAGTGGCGTAAGGAGTGTCATTACTCAAGCAGGACGCATAGGAATATTCTCGAAGAGGCCAGTCCAACTCAGCAATATCCACAAAAATCTTCCTTCGGAAATTTGCTTCACAAACTTGTTGAGGCATGAATTCAGAACAAGTTTAAGGATGATGGTGGATGCAGGAGCAATGGAAAAACGAGGACCAATGGTTGGTATGTTTACACAGAAAGAAGAAGATGGTGGACATGTCAGTGGAGGCTTGAAAAGTGAAGATGGAAAATTTAGCTGTGGGTATTCAAGCTTCAGAGGAAAGAGGGCAACGATGGAGGATTGTTTTGATATTAAAATGTCAACAATAGATGGGCACAAAGTCTGCCTCTTTGGCATATTTGATGGTCATGGTGGATCACGAGCTGCAGAGTATTTGAAGGAGCATCTCTTTGAGAATCTCATGAAGCATCCATTATTCTTGACTGATACTAAATCAGCTATTAGCCAAACATATCAACAGACAGATTCAGATTTTTTGGACTCTGAAAAAGATATTTACCGTGATGATGGTTCTACTGCATCAACTGCAGTATTGATTGGAAATCATCTGTATGTTGCCAATGTTGGAGACTCACGCACTGTTATATCAAAAGGAGGCAGAGCAATCGCACTCTCAAAGGATCATAAACCAAATAGAACTGACGAGAGGCAGAGAATTGAAAATGCAGGGGGTGTGGTGATGTGGGCAGGTACTTGGAGGGTAGGAGGTGTGTTAGCTATGTCACGTGCATTTGGAAACCGTATGTTGAAGCAATTTGTTGTGGCAGACCCTGAGATTCAGGATGAGGAAATCGATGCAGATTTTGAATTACTTGTTCTAGCAAGTGATGGTTTGTGGGACACCGTACCCAATGGGGCATGTCTCTCTCTCTCTGATGCAATATCGCTTGCACTAGCTGAAGATGAAGTAGAGGAAGCAGCCCGAAAGCTAACAGAAGCAGCCTTCACCCGTGGGAGTGCTGACAACATAACATGCATTGTGGTAAGGCTCCACCATGACAAAGCACCCCAATCCCCTTGTCAAAATGAATAA 1077 43.27 MVCSSGVRSVITQAGRIGIFSKRPVQLSNIHKNLPSEICFTNLLRHEFRTSLRMMVDAGAMEKRGPMVGMFTQKEEDGGHVSGGLKSEDGKFSCGYSSFRGKRATMEDCFDIKMSTIDGHKVCLFGIFDGHGGSRAAEYLKEHLFENLMKHPLFLTDTKSAISQTYQQTDSDFLDSEKDIYRDDGSTASTAVLIGNHLYVANVGDSRTVISKGGRAIALSKDHKPNRTDERQRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVADPEIQDEEIDADFELLVLASDGLWDTVPNGACLSLSDAISLALAEDEVEEAARKLTEAAFTRGSADNITCIVVRLHHDKAPQSPCQNE 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 503286 506905 + BLOR20951 Blo09g00036 64663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00036 358 CDD PP2Cc 92 345 IPR001932 -
Blo09g00036 358 Pfam Protein phosphatase 2C 94 338 IPR001932 -
Blo09g00036 358 SMART PP2C_4 83 343 IPR001932 -
Blo09g00036 358 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Blo09g00036 358 Gene3D - 82 353 IPR036457 -
Blo09g00036 358 PANTHER ALPHABET, ISOFORM E-RELATED 45 353 - -
Blo09g00036 358 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 45 353 - -
Blo09g00036 358 SUPERFAMILY PP2C-like 89 346 IPR036457 -
Blo09g00036 358 ProSiteProfiles PPM-type phosphatase domain profile. 93 345 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01427 Blo-Chr1:53080047 Blo09g00036 Blo-Chr9:503286 2.90E-109 dispersed
Blo09g00036 Blo-Chr9:503286 Blo11g00033 Blo-Chr11:266677 9.50E-53 dispersed
Blo17g00260 Blo-Chr17:2646590 Blo09g00036 Blo-Chr9:503286 6.22E-40 dispersed
Blo09g00036 Blo-Chr9:503286 Blo12g01039 Blo-Chr12:28238832 3.76E-123 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00036 K17506 - zju:107414609 527.324