Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00042 ATGGCGATTGCTGTGCTTGCCGCTCTTGACAATGCTCGAACTCAATGGTACCACGTAACTGCAATAGTGATCGCCGGAATGGGTTTCTTCACCGACGCTTACGATCTCTTCTGCATCTCCACCATTTCCAAGCTTTTAGGTCGTCTTTACTATTTTGATCCTTCCAGTTCAAAACCTGGAAAGCTCCCCAACCCTGTCAACAACGCCGTCATCGGGGTTGCCCTTGTCGGAACTTTAATGGGGCAACTGTTTTTTGGCCGGCTTGGCGATAAACTTGGCCGGAAAAAAGTTTACGGCGTGACTCTCATTATGATGGTTATTTGCGCTATTGGCTCGGGTTTGTCGTTTGGGTCGTCAGCGAAATCCGTCATCCGAACTCTCTGTTTCTTCAGATTCTGGCTTGGGTTTGGAATCGGTGGAGACTATCCTCTGTCGGCGACGATCATGTCGGAGTATGCTAATAAGACAACTCGCGGGTCTTTCATTGCCGCCGTTTTCGCCATGCAAGGAGTCGGAATAATATTTGCAGGTCTAGTTTCTTTGACACTCTCCAAACTCTTCCTGCACTTTAACAGCGCTCCACCCTATCTCGAAGATAAAGTCTTCTCCACTCAGCGTAATGCAGATTTTCTATGGCGAATCGTCTTGATGCTTGGAGCTTTACCCGCAATTGTAACCTATTACTGGAGGATGAAAATGCCAGAAACAGCTCGTTACACCGCCATTATTGAAGGAAACGGAAAGCTAGCTGCTGCAGATATGGGCAAAGTTTTGGACATCGAAATTCAAGCTGATCAAGATAAGGTTTCTCAATTCAAATCGGCAAATGAATACGGCTTGCTCTCTAAAGAATTTGTTCGTCGCCATGGAATGCATTTGATCGGAACGACGACCACTTGGTTCTTGTTAGACATAGCTTTTTACAGCAGTAATCTAACTCAGAAAGATATTTTTCCGGTGATGCATCTGACGAAGAAGCCGGAGCAAGTTAATGCTCTCGAAGAAGTCTACGAAACTTCGAGAGCCATGTTTCTTATTGCCTTGCTCGGAACTTTTCCCGGCTACTGGTTTACCGTGGCGCTTATCGAAAAACTCGGTCGATTCAAAATCCAACTGATGGGATTCTTCATGATGTCGTTGTTCATGGCTATCATCGGAATGCGATACGATTACCTCAAGCTTCACCCTTACCAATTCGCCACACTATACGGGTTAACGTTTTTTTTCGCAAATTTTGGCCCTAACAGTACTACGTTTGTTCTTCCTGCCGAGCTTTTTCCGACGAGGGTTAGGTCGACATGCCATGCATTAAGCGCAGCGGCTGGAAAAGCAGGGGCCATCGTCGGAGCGTTTGGAGTTCAAGGTTATACGTTGGATGGCGATCCACACAAGATTCAGAGGGCCATGATCATCTTAGCATTCACCAACTTGGTAGGGTTTTTCTTCACGTTCTTACTGACCGAGACCAAAGGCCGATCGTTGGAAGAGATATCCGGCGAAGATGGCGGCGGTAATGAAACTCCCAAGTCATCAATGAATAAACAAGAAAGGAGCGTTGAACTCTTCAATGAATGA 1575 46.29 MAIAVLAALDNARTQWYHVTAIVIAGMGFFTDAYDLFCISTISKLLGRLYYFDPSSSKPGKLPNPVNNAVIGVALVGTLMGQLFFGRLGDKLGRKKVYGVTLIMMVICAIGSGLSFGSSAKSVIRTLCFFRFWLGFGIGGDYPLSATIMSEYANKTTRGSFIAAVFAMQGVGIIFAGLVSLTLSKLFLHFNSAPPYLEDKVFSTQRNADFLWRIVLMLGALPAIVTYYWRMKMPETARYTAIIEGNGKLAAADMGKVLDIEIQADQDKVSQFKSANEYGLLSKEFVRRHGMHLIGTTTTWFLLDIAFYSSNLTQKDIFPVMHLTKKPEQVNALEEVYETSRAMFLIALLGTFPGYWFTVALIEKLGRFKIQLMGFFMMSLFMAIIGMRYDYLKLHPYQFATLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGAIVGAFGVQGYTLDGDPHKIQRAMIILAFTNLVGFFFTFLLTETKGRSLEEISGEDGGGNETPKSSMNKQERSVELFNE 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 624651 626659 + BLOR20957 Blo09g00042 64669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00042 524 TIGRFAM 2A0109: phosphate:H+ symporter 6 500 IPR004738 GO:0005315|GO:0006817|GO:0016021
Blo09g00042 524 Pfam Sugar (and other) transporter 22 498 IPR005828 GO:0016021|GO:0022857|GO:0055085
Blo09g00042 524 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-11 3 507 - -
Blo09g00042 524 MobiDBLite consensus disorder prediction 495 524 - -
Blo09g00042 524 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 491 IPR020846 GO:0022857
Blo09g00042 524 MobiDBLite consensus disorder prediction 504 524 - -
Blo09g00042 524 Gene3D MFS general substrate transporter like domains 17 514 IPR036259 -
Blo09g00042 524 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 507 - -
Blo09g00042 524 CDD MFS_PhT 22 490 - -
Blo09g00042 524 SUPERFAMILY MFS general substrate transporter 9 498 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00042 Blo-Chr9:624651 Blo12g00368 Blo-Chr12:20050241 0 dispersed
Blo09g00042 Blo-Chr9:624651 Blo05g00401 Blo-Chr5:4993956 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00042 K08176 - csv:101210631 855.514