Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00047 ATGGGACCAGTCCGGTCCGGTCCCGGACCGGTCGGTACCGGTGCCAAGTGTGTGAAGACCAGTGCCGGAACCGGTTCTGATCCGGTTCCGGTCCGATCTAAATCTGAAATCCCGGTTCTACCCGGTACCGGTTCAATGGTACCGGGTACCGTGGACCAGTACCGGGTAGAACCGATCACTATAGCACCGGATCGGGTCCGGTCCGGTGCTACATATACATGTACCGGTCCCGATACCGAAAGGCCAGTTCCGGTCCGGTTCTTCGGTACCGAGCCGGCTGGGTCTAAGGCCGCCGGTGTCGCATTTGCTGGACTTGCTCTTCCGGTTATGCTCGGCAACATTTTACGAAGTTCAAAGTTTTTTAAACGCCGTCGTTACTCATTCCCGCTCAATTTTTCCTTTTTCCCGCCTGAATCTGATCTTAAACGGCGACGTTCCTTCCTTGATGGAGTTCCCCGAGCAGGTCAGTCTGTCCGAAATCGAATCATCTACACTGCAAATTACCCTCTGAAAATCAACGACAATTCTCCCTTTCCAACTTCCATCTTCTTCCAATCAATTCTCCGAAAATGTCATTTGATCTACTCTGATCCAGTCTATCTTGGTTTTTCTTCAATGGGTGTTGATCAATTCGGAGATTTCTCAAAATCCCAACGAATAGTCCTTCTAATTGATCTCAATCCGCTTCTTTACCTTCAGAATCCGACCCCATATCTCACCTCCGTCCTCTGCTCTGCCAAAACTCTCCTCTCTTTCCCTCTTCTCTCTTCCTCACCCTCCTCTTCCTCTTCTCTCTTTGCTTTCAAATTGTTCTTCTCCTCCCTCTCCCCTCTCCTTTCCTCCTCCAAACTCCACAATTTGATTCCCGGTTGTCCCCTCTCCCTCTCTTTTAACCACTCCAGTTCAACTTTTCAGTCTCTTTCCAACATCCTCAATTCGATTTCTGCTAGTGAAAACCCTCTTGCCGACTTGCTTCATCCTAAGCTGCCTCCGCAGGCTTCATGCCTAGCTGCGTCTATGCGTCAACTCGTATATGATTATACTTGGGATCCTATTGCTGGAGATCCAGCTTCTGGTTTGTCTTCTGATAATTGTGATTTTCTTGGTGTTAGATCCAATTTGATAGTTTTGTTTTCTCAATTTTGTAAATCTGTTTATAGTTTGGCAAATTTCTTGAATGTGGGTGAGGAAGATGTATGTCTGAACAATTTAGATTCATTTACTAAAAGCTTCTGTGGATTGTTTGAAAGTGTGAATGATGCATTCATTAGTAGGGATATTCAGTGTAGTTGGGTCGATGTTAGGGAAAGTACTGAAAACTCTAATGGATCTAATGTATCTGAATCGATTTATGGTTTTTTCAAGAGTGGAATCAGGAGTTTAGGCTGGGGATTTTCCTCAACGGACTCCATTATCTTAGGTTCTGCTCTTGTTCCTTTTGGGTTGATTTATCCCAGAATTGGAATATCATCGAGAGTTTTTGACCATGATGAGTGTTCCAAGAAAGTTCAAGCCCAGCTATCTCTCGGAATTATAGATTCAAAGGGGAAGCCTTTGGAGTGCAAGAGTTGTGATCTTCAATTAGTCCAGATGAAGACAACAACTAAAACAAGAAGTGATGATCTTTTATATAACCTAGACTTACTGACTCATAGTAGTGATCATGAGAAAGATCCATCTAAAATTATAAAACTTCACGTCAAAGCTGTGCAAGATCATAGAGGATGCGAGAAATACAAAGGGTGCTCATCCAACCCTATATTTGTTAGTGAATTTTTGGGAAATTTTGTAAAAAATAGAAAGGAAAGTTCTGATCAATTCTTTGCAGATAAGGTTTTGAAAATGCTAGCTATTGAAACAAGTGGCTGTCCGCTGCAAAATTCCTTTCCCATTTGGCAAATTTTCTTGAGTTTTCTCTACAAGGAAAGTTACGTTGCCATGGTTACCATTTCAAATGGAAATGAGAATTCATATATGGGAGTCTTAAGGCCTTTTACAATCTCCTCAGCTCTACTTTTTATCATAGATGAAGAATTCCATCCTCCCAAAATGACTAATAAAACAGATGGAAAAAGCAAGAAAGGTAAGAAGTTCTCAAATTTATGCTTGGATCTCACATGGAATGCCTTCTGTCAGGCTGCATATAAGAACTCTAAGCTGGATTTGGGAGAGGCATATTTTTGTAAGGGTTGTAAGAGCTCAAAAAAGTTGAAGTTTTTGAAATGTTGGACGAAACAAGTAAAGAAATCCAGTTTTGACTCTCTGAACTCAGAAAAGTCCAAGCTGGAAGAGATTCCAAAGGAAACAGATGATAAATTTATTCGCTTACCCCAAGAAAGTGAAAGTGAAGACCCGAATTCTACATCAGCCTCGGCTGGAGGAAACTCGATGGTTGAGGCTTTGAGAATACTTGATGAAGCTTCTCCTAACTGCTTTTTAGAAACGTCACAAGCATTTTTTGGTGATCTTTCCAATAAAGTTAAACAAGGAATTGAATCTGAAGCTGTTGACTTGGGGGCTTTAGCAGAGCGACTTGTAAATTCATCAATATATTGGTTATCTCAAAAGGACAGTCCAGATCCGACCACCTCAGAAAGTCGAGTTTCTTCCGAAAAATCTGATGAAGCTGATGATGAAATAATGCTTTCCACTCTAAGGAAACTTCTTTTGAGGGAGCCCAAGGATTTGGCTGCAAACCACAAGAACAATAATAAATCTTCTTCAGCATCTGATCCTGGATCCAGTGGATTAGCCTCAAAAAACTTAGTGAGAGAATATGAATTGCAAATTTTGTTTAGGATGGAGGTGCTAAGGTCAGAGGTTGGAGAAAGTGTTGGAGTCTCTGTGAAACAGAAGCTTATTAAACATATTTGCTTGTTTTTAGAGACGATTCAGTGTCAGTTGGAGGGTGGTTTTTTTGGGGATTGGAGCCTTGAAATTTATTTGGATAAAATTATAAAGAGCAGGTACGGTGAAAGTCTTGGAGAAGTAGTTCACAGAATATATGAGAAGATGGATCTGTTGTTATTTGCTGATGAAGATGAACCCCCCACTCATATTCTCAACAGTGAAGATAGCAGTCACTCTTGCAGAGAAAAACCCGAAAGAGACGAGATGGGGGAGAATCACAATTTTAACGACCAACTTTCAACAGACGAGACGGCCATTGGGGAAAATGAGTACATAAACTTCAATATAACTAAGAAGGAGCAAAGCTACAAATTGTTAGAAGCTCAGGAGAGGAGAGACAGAGCAAGGAGATTTGCATCTTTTACCAGCTGGGTTCCTGATTTGCAGAGAGTTTGGGCTCCAAAACAGCCAAAACTGGCGAAAAAGAAGATTGATCATCGTCTGCGAAGGAAATCGTCTAAAAGAAAAGACTATGGAAATGCAAGCTTTGACATGGTTTGTGAGACCCCAATGACGGAAAAGAGACGTTCCTGCTCGAGGGTGAGCGGCATTCAAGACGAATATGTGACCGGTTTTAGTGATAATCCTTGCAAGTCTGTCTCCAAGGTATTGTTCAAGGACAAAGACTAA 3540 41.75 MGPVRSGPGPVGTGAKCVKTSAGTGSDPVPVRSKSEIPVLPGTGSMVPGTVDQYRVEPITIAPDRVRSGATYTCTGPDTERPVPVRFFGTEPAGSKAAGVAFAGLALPVMLGNILRSSKFFKRRRYSFPLNFSFFPPESDLKRRRSFLDGVPRAGQSVRNRIIYTANYPLKINDNSPFPTSIFFQSILRKCHLIYSDPVYLGFSSMGVDQFGDFSKSQRIVLLIDLNPLLYLQNPTPYLTSVLCSAKTLLSFPLLSSSPSSSSSLFAFKLFFSSLSPLLSSSKLHNLIPGCPLSLSFNHSSSTFQSLSNILNSISASENPLADLLHPKLPPQASCLAASMRQLVYDYTWDPIAGDPASGLSSDNCDFLGVRSNLIVLFSQFCKSVYSLANFLNVGEEDVCLNNLDSFTKSFCGLFESVNDAFISRDIQCSWVDVRESTENSNGSNVSESIYGFFKSGIRSLGWGFSSTDSIILGSALVPFGLIYPRIGISSRVFDHDECSKKVQAQLSLGIIDSKGKPLECKSCDLQLVQMKTTTKTRSDDLLYNLDLLTHSSDHEKDPSKIIKLHVKAVQDHRGCEKYKGCSSNPIFVSEFLGNFVKNRKESSDQFFADKVLKMLAIETSGCPLQNSFPIWQIFLSFLYKESYVAMVTISNGNENSYMGVLRPFTISSALLFIIDEEFHPPKMTNKTDGKSKKGKKFSNLCLDLTWNAFCQAAYKNSKLDLGEAYFCKGCKSSKKLKFLKCWTKQVKKSSFDSLNSEKSKLEEIPKETDDKFIRLPQESESEDPNSTSASAGGNSMVEALRILDEASPNCFLETSQAFFGDLSNKVKQGIESEAVDLGALAERLVNSSIYWLSQKDSPDPTTSESRVSSEKSDEADDEIMLSTLRKLLLREPKDLAANHKNNNKSSSASDPGSSGLASKNLVREYELQILFRMEVLRSEVGESVGVSVKQKLIKHICLFLETIQCQLEGGFFGDWSLEIYLDKIIKSRYGESLGEVVHRIYEKMDLLLFADEDEPPTHILNSEDSSHSCREKPERDEMGENHNFNDQLSTDETAIGENEYINFNITKKEQSYKLLEAQERRDRARRFASFTSWVPDLQRVWAPKQPKLAKKKIDHRLRRKSSKRKDYGNASFDMVCETPMTEKRRSCSRVSGIQDEYVTGFSDNPCKSVSKVLFKDKD 1179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 736722 749305 + BLOR20962 Blo09g00047 64674

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00047 1179 MobiDBLite consensus disorder prediction 1020 1050 - -
Blo09g00047 1179 MobiDBLite consensus disorder prediction 900 917 - -
Blo09g00047 1179 MobiDBLite consensus disorder prediction 1020 1043 - -
Blo09g00047 1179 MobiDBLite consensus disorder prediction 766 793 - -
Blo09g00047 1179 PANTHER UNCHARACTERIZED 214 1150 IPR026153 GO:0005634|GO:0006260|GO:0010212|GO:0033314
Blo09g00047 1179 MobiDBLite consensus disorder prediction 898 917 - -
Blo09g00047 1179 MobiDBLite consensus disorder prediction 1 44 - -
Blo09g00047 1179 MobiDBLite consensus disorder prediction 854 877 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00047 - - - qsu:111995703 875.93
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00204 Blo-Chr3:4765144 Blo09g00047 Blo-Chr9:736722 2.24E-23 dispersed
Blo09g00047 Blo-Chr9:736722 Blo15g00667 Blo-Chr15:19672032 8.54E-17 dispersed
Blo09g00047 Blo-Chr9:736722 Blo01g00717 Blo-Chr1:8999761 2.20E-15 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g844 . . . Bda07g01914 Bpe03g00166 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo09g00047 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008339 1 5 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 2 3 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo09g00047 Blo_Chr09 FPKM 6.089177 5.715199 8.219407 7.633675 7.715473 6.386647 8.651385 29.817135 32.422909 30.694508