Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00049 ATGGTTGCCAACAACCTTCTCTGGGTCATCTTCTTCCTGGCATTATCATGGCTGGCAGGCAGTTGCAGGGCTACCCAAATCAGTTTAGGATCAAAGTTAATGGCTGGCCAAGGAGGAAGATGGGTCTCAGAGAATGGAACCTTTGCATTTGGGTTCACTCAGAATGGCTCGCCGGAGCTGTTTCAGTTGGCTATCTGGTTTGCAAATTTGCCTGGAGATACAACTCTTGTTTGGTCTGCAAACAGAACATATCCTGTGAGCAAGGAAGCGACAGTGGAGCTTGATGCCACCGGAAATCTCGTCCTCTCAGATGGAAGCGCTGTCGTGTGGTCTTCAAACATCTCTAAATCCGACGCACAGTTCGCCACCATGTTGGAAACTGGCAATTTCGTCATCTACGACGAAGCCAAAACTCCGATTTGGCAGAGCTTTTCACACCCATCCGATACTCTCCTTCCAAACCAACCTCTAACGGTCTCTTTAGAGCTCTCCACCTCCATTCAATCCCCCTCCCATGGCGGATTTTATACCCTCAAAATGCTTCAACAACCCACTTCTCTTACCCTCGCATTGACCTACAACTTGCTCGCTTCTTCTGCAAATTATTCGTACTGGTCGGCGCCGGACATTTCCAACGTTACTGGAGAAGTCATCGCTGTTTTAGACGAAGAAGGAAGCTTTGGAATCGCCTACGGGGAGTCCTCCGTCGGAGCTGTATATGTGTATAAAAACGACGGCGACAATGGGGGTTTATCTGCAGCCATTAACAGCTCGACCAGACCTTCAACTCTTCGAAGATTGGCTCTGGAGAGTAATGGCAACCTGCGTTTGTACCGTTGGGACGACGACGTAAATGGATCCCGTCAATGGGTGCCGGAATGGGCTCCCATTTCGAACCCTTGTGATATCGCCGGAGCTTGCGGAAATGGCATCTGTAATTTGGACAAAACGAAGTCGAACGCCTCTTGTTCGTGCCTTCCGGGTACTTACAGAGAAGAGGGTGTTAAATTTAGCCATTGCTACGAAGATTCGAATTCTTCCCTTGTCGGAAAATGTGATTCCCCCCATGAAAATCTTGGATCAGAGCTTACTATTTCAGCAATTCAGCAAACAAATTACTATTACTCTGTATCTTCCGTGATAGCAAATTACAGTGATATCGAAACGGTATCAAAATGTGGAGATGCTTGTTTATCAGACTGTGAATGTGTTGCTTCCATCTATGGACTTAGTGAAGAAAAGCCTTATTGTTGGATCTTGAGGAGCTTAGATTTTGGTGGATTTGAAGATCCAAGTTCAACCCTTTTTGTAAAATTCAACTCCAACGGCTCGAAAACGCCTGAAATTCAAAACGGGAAAAGTGCGTCCAAGGGGTCGAAAAATGGGAGAGACAAGGTTTTGATTCTTCCCATTGTTCTCGCAATGGCTCTTCTTATTTGTCTGTTGTGCTTATTGTTGTACTACAATATCCATAGGAAGAGAGCTCTTAAAAGATCCATACAGAGCTCATTGATATTATCTGGCGCTCCAATAAGTTTCAGTTTCCGCGATTTGCAGATCAGGACGAGTAATTTTTCTCAGTTTCTTGGAGTAGGTGGATTTGGGAGTGTTTATAAAGGAAGCCTTGGAGATGGGACTTTGATAGCAGTGAAGAAGCTTGACAAGGTGTTACCTCATGGAGAGAAAGAGTTCATAACTGAAGTTAACACGATTGGATCGATGCAACACATGAACTTAGTTCGTCTTTGCGGATACTGCTCAGAGGGATCGCATCGGCTTCTAGTGTATGAATTCATGAAGAATGGGTCACTAGACAAATGGATTTTTCCATCACATAAATCTAAAGATCGAGTTCTAGACTGGCCGACTCGGATGCGCATAGCAATCGGAACAGCACAAGGAATTGCTTATTTCCACGAACAATGCAGGAACAGGATAATACATTGCGATATCAAACCCGAAAATATTTTGTTGGACGAGGAATTCTGTCCGAAAGTATCGGATTTCGGCCTCGCAAAGCTTATGGGAAGAGAGCACTCTCATGTTGTCACTATGATTCGAGGGACTCGAGGCTATTTGGCTCCTGAGTGGGTTAGCAACCGTCCGATTACAGTGAAGGCGGACGTTTATAGCTATGGGATGCTTCTTCTCGAGATTATTGGAGGACGAAGAAACTTCGATATGTCTTTGAGTGCAGAGGATTTCTTCTATCCAGGATGGGCTTATAAGGAGATGAAGAATGAAACGCCATTAAAAGTTGCAGACAAGAGGCTGAAGGGAGTAGTGGAGGAAGAAGAGATGACGAGGGCATTGAAGGTCGCATTCTGGTGCATTCAAGACGATGTTTCGATGAGGCCAATGATGGGGGAGATCGTGAGGATGTTGGAACCATCATGCATCATCGAGACCCCGCCGATGCCGCAGACAATAACCGAGCTGGTCGATGAAGGATTAGATGTGGTGTACAAAGCCATGAAGAGGGACTTGAATCAATACTCTTCCTTCACCATCAACACTACCCACCATTCATCTCAGGCTACTTGTAGTTATTCCACCATGTCTCCTAGGTAG 2571 45.55 MVANNLLWVIFFLALSWLAGSCRATQISLGSKLMAGQGGRWVSENGTFAFGFTQNGSPELFQLAIWFANLPGDTTLVWSANRTYPVSKEATVELDATGNLVLSDGSAVVWSSNISKSDAQFATMLETGNFVIYDEAKTPIWQSFSHPSDTLLPNQPLTVSLELSTSIQSPSHGGFYTLKMLQQPTSLTLALTYNLLASSANYSYWSAPDISNVTGEVIAVLDEEGSFGIAYGESSVGAVYVYKNDGDNGGLSAAINSSTRPSTLRRLALESNGNLRLYRWDDDVNGSRQWVPEWAPISNPCDIAGACGNGICNLDKTKSNASCSCLPGTYREEGVKFSHCYEDSNSSLVGKCDSPHENLGSELTISAIQQTNYYYSVSSVIANYSDIETVSKCGDACLSDCECVASIYGLSEEKPYCWILRSLDFGGFEDPSSTLFVKFNSNGSKTPEIQNGKSASKGSKNGRDKVLILPIVLAMALLICLLCLLLYYNIHRKRALKRSIQSSLILSGAPISFSFRDLQIRTSNFSQFLGVGGFGSVYKGSLGDGTLIAVKKLDKVLPHGEKEFITEVNTIGSMQHMNLVRLCGYCSEGSHRLLVYEFMKNGSLDKWIFPSHKSKDRVLDWPTRMRIAIGTAQGIAYFHEQCRNRIIHCDIKPENILLDEEFCPKVSDFGLAKLMGREHSHVVTMIRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNFDMSLSAEDFFYPGWAYKEMKNETPLKVADKRLKGVVEEEEMTRALKVAFWCIQDDVSMRPMMGEIVRMLEPSCIIETPPMPQTITELVDEGLDVVYKAMKRDLNQYSSFTINTTHHSSQATCSYSTMSPR 856
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 771731 774906 - BLOR20964 Blo09g00049 64676

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00049 856 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 161 IPR036426 -
Blo09g00049 856 ProSiteProfiles Bulb-type lectin domain profile. 26 145 IPR001480 -
Blo09g00049 856 SMART blect_4 32 147 IPR001480 -
Blo09g00049 856 Gene3D Phosphorylase Kinase; domain 1 488 598 - -
Blo09g00049 856 PANTHER OS07G0415500 PROTEIN 9 856 - -
Blo09g00049 856 SUPERFAMILY Protein kinase-like (PK-like) 501 796 IPR011009 -
Blo09g00049 856 PIRSF SRK 1 849 IPR024171 GO:0004674
Blo09g00049 856 Gene3D Transferase(Phosphotransferase) domain 1 599 802 - -
Blo09g00049 856 CDD STKc_IRAK 529 797 - -
Blo09g00049 856 CDD B_lectin 36 147 IPR001480 -
Blo09g00049 856 Pfam D-mannose binding lectin 75 161 IPR001480 -
Blo09g00049 856 Gene3D - 21 146 IPR036426 -
Blo09g00049 856 Pfam Protein kinase domain 526 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo09g00049 856 ProSitePatterns Protein kinases ATP-binding region signature. 529 552 IPR017441 GO:0005524
Blo09g00049 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Blo09g00049 856 ProSiteProfiles Protein kinase domain profile. 523 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo09g00049 856 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 9 856 - -
Blo09g00049 856 SMART serkin_6 523 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo09g00049 856 Pfam S-locus glycoprotein domain 257 328 IPR000858 GO:0048544
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00049 - - - tcc:18605673 1264.98
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00049 Blo-Chr9:771731 Blo13g00388 Blo-Chr13:22932953 3.20E-145 dispersed
Blo09g00049 Blo-Chr9:771731 Blo18g00024 Blo-Chr18:191418 2.94E-141 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g818 . . . . . . . . . . . . . . . . . Bhi01g01428 . . . . Mch10g0108 . . . . . . . . . . . . . . . . . Blo09g00049 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008718 0 4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 2 2 35
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84455 PF00069 Pkinase 6.70E-47 CL0016 Blo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo09g00049 Blo_Chr09 FPKM 173.338791 177.974182 139.2715 142.840256 234.904373 243.672897 239.386459 181.576721 198.082886 178.07576