Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00084 ATGGCACCTTCACGGGTGGCGGCACAATCTTCCTCCAGTTCAGGGATTTTCTTCCAGGCAGACGGGCAGTCCCAGGCTGTTATTAATTCTCACTTGAGCTCATCTTTTGGAAACTCATCTACTTCAATTCCTGGACCTGGAAGATCAGATTTGATTCCAGCTTCGGGAGACATGAATAATGCAGTTTTAAATAGTGTGGCAAACTCAGGTCCAAGTGTTGGGGCAAGTTCTTTGGTTACAGATGCAAACTCTGCATTCTCAGGAGGCCCACATCTGCAGAGAAGTGCTAGCATCAATAACGAGTCATACATGCGGTTGCCTGCATCGCCTTTGTCATTCTCCTCCAATAATCTCAGTATTTCAGGATCATCAGTTATGGATGGCTCTTCAGTGGTGCAGCAGAATTCACAACCAGACCATAATTCCCAGCAAATGCAACATAACCAAATGCAGACCCAGCAAGGTGCATCAAGTGCAAGTTCATTGCCATCATCACAAACTGGCCAAGTTTCACTTCCTCTTGGTGCACGACTTTCTGGGTCTTTCGTTACGGATCCGAGTAATTTTTCTCAGGTGCAGAAGAAACCACGGTTGGACTCAAAGCAGGAAGATATTCTGCAACAGCAGATGTTGCAACAGCTATTGCAGAGGCAAGACTCAATGCAACTACAAGGCCGTAATCCACAATTGCAAGCGCTTTTCCAGCAACAAAGATTTCGGCAACAACAGCAGCTTTTGCAGTCTATGCCACAGTTGCAGAGAGCTCAATTGCATCAGCAGCAGCAGCAGCAGCAGCAGATGCAGTTGAGACAGCAGCTGCAACAGCAGGCAGTGCAGCCAAGTTCTCCAATGAAACGACCATATGATGGTGGTGTATGTTCCCGTCGACTGATGCAATATTTATATCATCAACGGCAAAGGCCTCAGGACAATAGCATTGCCTATTGGAGGAAGTTTGTAACAGAGTATTACTCGCCTCGTGCAAAGAAAAGATGGTGCTTGTCATTGTATGATAATGTTGGCCATCATGCACTTGGTGTGTTTCCTCAGGCAGCTATGGATGCATGGCAATGTGACATCTGTGGATCTAAATCTGGAAGAGGATTTGAAGCTACTTATGAAGTACTTCCTAGACTAAACGAGATCAAATTTGGCAGTGGCGTCATCGATGAGCTTTTATTTTTGGATTTACCACGTGAATGTAGATTTAATTCTGGAATTATGATGCTGGAGTATGGGAAAGCTGTCCAAGAGAGCGTTTATGAGCAACTTCGGGTTGTTCGTGAGGGCCAGCTTCGTATCATATTCACAAATGATTTGAAGATATTGTCTTGGGAATTTTGTGCACGACGCCATGAGGAACTGCTTCCTCGTAGGTTGGTGGCTCCACAGGTGCATCATTTAGTTCAGGTTGCACAGAAATGCCAGAGCACAATCTCTGAAGGTGGATCTGATGGGATGTCGCAGCAAGATTTGCAAGCTAACAGCAATATGTGA 1497 45.49 MAPSRVAAQSSSSSGIFFQADGQSQAVINSHLSSSFGNSSTSIPGPGRSDLIPASGDMNNAVLNSVANSGPSVGASSLVTDANSAFSGGPHLQRSASINNESYMRLPASPLSFSSNNLSISGSSVMDGSSVVQQNSQPDHNSQQMQHNQMQTQQGASSASSLPSSQTGQVSLPLGARLSGSFVTDPSNFSQVQKKPRLDSKQEDILQQQMLQQLLQRQDSMQLQGRNPQLQALFQQQRFRQQQQLLQSMPQLQRAQLHQQQQQQQQMQLRQQLQQQAVQPSSPMKRPYDGGVCSRRLMQYLYHQRQRPQDNSIAYWRKFVTEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDLPRECRFNSGIMMLEYGKAVQESVYEQLRVVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVHHLVQVAQKCQSTISEGGSDGMSQQDLQANSNM 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1464228 1467199 - BLOR20999 Blo09g00084 64711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00084 498 Coils Coil 252 272 - -
Blo09g00084 498 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 9 148 - -
Blo09g00084 498 MobiDBLite consensus disorder prediction 479 498 - -
Blo09g00084 498 Pfam LIM-domain binding protein 296 481 IPR029005 -
Blo09g00084 498 PANTHER LIM DOMAIN-BINDING PROTEIN 9 148 IPR029005 -
Blo09g00084 498 PANTHER LIM DOMAIN-BINDING PROTEIN 182 498 IPR029005 -
Blo09g00084 498 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 182 498 - -
Blo09g00084 498 MobiDBLite consensus disorder prediction 124 174 - -
Blo09g00084 498 MobiDBLite consensus disorder prediction 181 195 - -
Blo09g00084 498 MobiDBLite consensus disorder prediction 124 201 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo07g00424 Blo09g00084 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00084 Blo-Chr9:1464228 Blo17g00225 Blo-Chr17:2321508 1.05E-87 dispersed
Blo09g00084 Blo-Chr9:1464228 Blo07g00424 Blo-Chr7:8183460 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00084 - - pper:18787712 707.983