Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo09g00092 | ATGTCTTTTTTCTGGAATCAGGACGCTTCCTACTCTACTTACACTGATTCACCCGCTACCCAATATGGCGGCGGCTCCTCTTCCTTTGGCGGTAGAACTTCTCCGCCCTCCAATGGCAGCCATTCGAAGTACCGGGGTGTAAGGAGACGGAGCGGGAAATGGGTTTCAGAGATACGGGAGCCGCGTAAAACTACGCGCATTTGGCTCGGGACGTACTCCACGCCGGAGATGGCGGCTGCAGCATATGACGTGGCGGCGCTGGCATTGAAAGGGCAGGAAGCTACGTTGAATTTTCCGAATTCTATTTATTCATATCCCGTTCCGGCTTCTAACTCGGCGAATGATATTCGAGCGGCGGCGGCGAGGGCGGCTGAGAATTTTGCGCCGTCGTCGGATTCCGGGAGTGTGGGTCAATTTGGAAATGATGAGGGGGTGGGTCCTGGATGGGTGGCTGGAGGGGATTACGTGGATATGGAGGCTCAATTGAATATGCCGAATTTTCTGGCAGATATGGCGGAGGGAATGATGGTTAGCCCTCCCAGGATGCAGTACTCCGATTACTCGTCGGCGAATTTCAATGGGGATGAGCTATGGCGATGA | 600 | 54.17 | MSFFWNQDASYSTYTDSPATQYGGGSSSFGGRTSPPSNGSHSKYRGVRRRSGKWVSEIREPRKTTRIWLGTYSTPEMAAAAYDVAALALKGQEATLNFPNSIYSYPVPASNSANDIRAAAARAAENFAPSSDSGSVGQFGNDEGVGPGWVAGGDYVDMEAQLNMPNFLADMAEGMMVSPPRMQYSDYSSANFNGDELWR | 199 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1744422 | 1745021 | + | BLOR21007 | Blo09g00092 | 64719 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo09g00092 | 199 | Gene3D | AP2/ERF domain | 42 | 101 | IPR036955 | GO:0003700|GO:0006355 | |
Blo09g00092 | 199 | SMART | rav1_2 | 43 | 105 | IPR001471 | GO:0003700|GO:0006355 | |
Blo09g00092 | 199 | CDD | AP2 | 42 | 101 | IPR001471 | GO:0003700|GO:0006355 | |
Blo09g00092 | 199 | ProSiteProfiles | AP2/ERF domain profile. | 43 | 99 | IPR001471 | GO:0003700|GO:0006355 | |
Blo09g00092 | 199 | Pfam | AP2 domain | 42 | 91 | IPR001471 | GO:0003700|GO:0006355 | |
Blo09g00092 | 199 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 36 | 198 | - | - | |
Blo09g00092 | 199 | MobiDBLite | consensus disorder prediction | 22 | 52 | - | - | |
Blo09g00092 | 199 | MobiDBLite | consensus disorder prediction | 22 | 41 | - | - | |
Blo09g00092 | 199 | PRINTS | Ethylene responsive element binding protein signature | 81 | 101 | IPR001471 | GO:0003700|GO:0006355 | |
Blo09g00092 | 199 | PRINTS | Ethylene responsive element binding protein signature | 44 | 55 | IPR001471 | GO:0003700|GO:0006355 | |
Blo09g00092 | 199 | SUPERFAMILY | DNA-binding domain | 42 | 101 | IPR016177 | GO:0003677 | |
Blo09g00092 | 199 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 | 36 | 198 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo09g00092 | Blo-Chr9:1744422 | Blo12g00499 | Blo-Chr12:22835745 | 2.84E-45 | dispersed | |
Blo07g00430 | Blo-Chr7:8484956 | Blo09g00092 | Blo-Chr9:1744422 | 1.76E-75 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12754 | PF00847 | AP2 | 7.20E-13 | CL0081 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo09g00092 | - | - | csin:114273073 | 178.718 |