Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo09g00093 | ATGGACAACTTTTCGAATTTTTATGAGATGTTCTCTTTAGGGTCGCCGGATTTTTCTCCTGAAGTGTCAAGCTCCGAGAGCAGTAATTCTAAAGGGGCGAATTTTTCCGACGAGGATGTAATGTTGGCGTCAAAGCATCCGAAGAAGAAGGCGGGGAGGAAGAAGTTTAAAGAGACGAGGCACTTGGTTTACAGAGGAGTGAGAAGAAGAAATTCCGGCAAGTGGGTGAGCGAGGTGAGAGAGCCCAACAAGAAGTCCAGGATTTGGTTGGGGACTTATCAGACCGCCGAAATGGCGGCTCGGGCACATGATGTGGCGGCATTGGCCCTTAGGGGCCGATCTGCTTGTCTGAATTTCGCCGACTCCTTGTGGCGGCTGCCCGTGCCTGATTCCGCCTCCCCTAAGGACATTCAAAAGGCAGCAGCGGAGGCGGCAGAGATGTTCCGAGAGGTGGAGTCCGATGTGTCGAGTTTGGACGATTCAACAGCGGAAATGTCAAAAACTTGCAGCAAAACGTCAGCCGTTGTTGACGAAATGGCGGCGGAGACATCACCAAATTGGTGGTTTTTGGACGAGGATGAGGTTTTCAGATTGCCGGGACTGCTGATGAACATGGCGGAGGGAATGTTGTTGCCGCCGCCACAGTGTACGGTAGATGCTGACGTGGGATTAGAGACTGACGTGGCATTATGGAGTTATTCATTTTAA | 708 | 51.27 | MDNFSNFYEMFSLGSPDFSPEVSSSESSNSKGANFSDEDVMLASKHPKKKAGRKKFKETRHLVYRGVRRRNSGKWVSEVREPNKKSRIWLGTYQTAEMAARAHDVAALALRGRSACLNFADSLWRLPVPDSASPKDIQKAAAEAAEMFREVESDVSSLDDSTAEMSKTCSKTSAVVDEMAAETSPNWWFLDEDEVFRLPGLLMNMAEGMLLPPPQCTVDADVGLETDVALWSYSF | 235 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1750154 | 1750861 | + | BLOR21008 | Blo09g00093 | 64720 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo09g00093 | 235 | MobiDBLite | consensus disorder prediction | 14 | 35 | - | - | |
Blo09g00093 | 235 | SMART | rav1_2 | 63 | 126 | IPR001471 | GO:0003700|GO:0006355 | |
Blo09g00093 | 235 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D | 23 | 234 | IPR045277 | GO:0003700 | |
Blo09g00093 | 235 | CDD | AP2 | 64 | 122 | IPR001471 | GO:0003700|GO:0006355 | |
Blo09g00093 | 235 | PANTHER | AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR | 23 | 234 | - | - | |
Blo09g00093 | 235 | Gene3D | AP2/ERF domain | 63 | 121 | IPR036955 | GO:0003700|GO:0006355 | |
Blo09g00093 | 235 | PRINTS | Ethylene responsive element binding protein signature | 86 | 102 | IPR001471 | GO:0003700|GO:0006355 | |
Blo09g00093 | 235 | PRINTS | Ethylene responsive element binding protein signature | 64 | 75 | IPR001471 | GO:0003700|GO:0006355 | |
Blo09g00093 | 235 | ProSiteProfiles | AP2/ERF domain profile. | 63 | 120 | IPR001471 | GO:0003700|GO:0006355 | |
Blo09g00093 | 235 | SUPERFAMILY | DNA-binding domain | 63 | 122 | IPR016177 | GO:0003677 | |
Blo09g00093 | 235 | MobiDBLite | consensus disorder prediction | 14 | 55 | - | - | |
Blo09g00093 | 235 | Pfam | AP2 domain | 63 | 112 | IPR001471 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo06g01111 | Blo09g00093 | CCT | |
Blo07g00430 | Blo09g00093 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo06g01109 | Blo-Chr6:34509872 | Blo09g00093 | Blo-Chr9:1750154 | 6.84E-71 | dispersed | |
Blo09g00093 | Blo-Chr9:1750154 | Blo12g00499 | Blo-Chr12:22835745 | 4.03E-45 | dispersed | |
Blo17g00070 | Blo-Chr17:534712 | Blo09g00093 | Blo-Chr9:1750154 | 2.23E-35 | dispersed | |
Blo18g00187 | Blo-Chr18:1798920 | Blo09g00093 | Blo-Chr9:1750154 | 6.46E-22 | dispersed | |
Blo09g00093 | Blo-Chr9:1750154 | Blo15g00153 | Blo-Chr15:1552776 | 4.58E-78 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12755 | PF00847 | AP2 | 5.90E-14 | CL0081 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo09g00093 | - | K09286 | ini:109186327 | 263.077 |