Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00093 ATGGACAACTTTTCGAATTTTTATGAGATGTTCTCTTTAGGGTCGCCGGATTTTTCTCCTGAAGTGTCAAGCTCCGAGAGCAGTAATTCTAAAGGGGCGAATTTTTCCGACGAGGATGTAATGTTGGCGTCAAAGCATCCGAAGAAGAAGGCGGGGAGGAAGAAGTTTAAAGAGACGAGGCACTTGGTTTACAGAGGAGTGAGAAGAAGAAATTCCGGCAAGTGGGTGAGCGAGGTGAGAGAGCCCAACAAGAAGTCCAGGATTTGGTTGGGGACTTATCAGACCGCCGAAATGGCGGCTCGGGCACATGATGTGGCGGCATTGGCCCTTAGGGGCCGATCTGCTTGTCTGAATTTCGCCGACTCCTTGTGGCGGCTGCCCGTGCCTGATTCCGCCTCCCCTAAGGACATTCAAAAGGCAGCAGCGGAGGCGGCAGAGATGTTCCGAGAGGTGGAGTCCGATGTGTCGAGTTTGGACGATTCAACAGCGGAAATGTCAAAAACTTGCAGCAAAACGTCAGCCGTTGTTGACGAAATGGCGGCGGAGACATCACCAAATTGGTGGTTTTTGGACGAGGATGAGGTTTTCAGATTGCCGGGACTGCTGATGAACATGGCGGAGGGAATGTTGTTGCCGCCGCCACAGTGTACGGTAGATGCTGACGTGGGATTAGAGACTGACGTGGCATTATGGAGTTATTCATTTTAA 708 51.27 MDNFSNFYEMFSLGSPDFSPEVSSSESSNSKGANFSDEDVMLASKHPKKKAGRKKFKETRHLVYRGVRRRNSGKWVSEVREPNKKSRIWLGTYQTAEMAARAHDVAALALRGRSACLNFADSLWRLPVPDSASPKDIQKAAAEAAEMFREVESDVSSLDDSTAEMSKTCSKTSAVVDEMAAETSPNWWFLDEDEVFRLPGLLMNMAEGMLLPPPQCTVDADVGLETDVALWSYSF 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1750154 1750861 + BLOR21008 Blo09g00093 64720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00093 235 MobiDBLite consensus disorder prediction 14 35 - -
Blo09g00093 235 SMART rav1_2 63 126 IPR001471 GO:0003700|GO:0006355
Blo09g00093 235 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 23 234 IPR045277 GO:0003700
Blo09g00093 235 CDD AP2 64 122 IPR001471 GO:0003700|GO:0006355
Blo09g00093 235 PANTHER AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR 23 234 - -
Blo09g00093 235 Gene3D AP2/ERF domain 63 121 IPR036955 GO:0003700|GO:0006355
Blo09g00093 235 PRINTS Ethylene responsive element binding protein signature 86 102 IPR001471 GO:0003700|GO:0006355
Blo09g00093 235 PRINTS Ethylene responsive element binding protein signature 64 75 IPR001471 GO:0003700|GO:0006355
Blo09g00093 235 ProSiteProfiles AP2/ERF domain profile. 63 120 IPR001471 GO:0003700|GO:0006355
Blo09g00093 235 SUPERFAMILY DNA-binding domain 63 122 IPR016177 GO:0003677
Blo09g00093 235 MobiDBLite consensus disorder prediction 14 55 - -
Blo09g00093 235 Pfam AP2 domain 63 112 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g01111 Blo09g00093 CCT
Blo07g00430 Blo09g00093 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01109 Blo-Chr6:34509872 Blo09g00093 Blo-Chr9:1750154 6.84E-71 dispersed
Blo09g00093 Blo-Chr9:1750154 Blo12g00499 Blo-Chr12:22835745 4.03E-45 dispersed
Blo17g00070 Blo-Chr17:534712 Blo09g00093 Blo-Chr9:1750154 2.23E-35 dispersed
Blo18g00187 Blo-Chr18:1798920 Blo09g00093 Blo-Chr9:1750154 6.46E-22 dispersed
Blo09g00093 Blo-Chr9:1750154 Blo15g00153 Blo-Chr15:1552776 4.58E-78 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12755 PF00847 AP2 5.90E-14 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00093 - K09286 ini:109186327 263.077