Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00111 ATGGCAGGGGCTGGGGTGACGATTCACGTTGAAGCTGCTGGGGACCTGTGGTTCGACCTACATTCCATGTTGGACCAAACCGGTTTGTCCCTCTGGCTCTTGCCTGGTACAAGCACGAGAGAAAATGAGGAACAGATTAAGGAGCAGTTGATTAAGAATTTGCATGGCCGAGTCATGTGGCTTGCTAGGCTAATGAAATTGAAAAGGAATTCTGGTGAAATCTTGAAAGCGCCCAGAGTGAAACTCGAGATTCCACTCAATTGCTCGGCACACGGCCAGCTGAAAACGTGCCCTAGTAACTACCCGATCAACATTGGCTTGAAAGATGTCCTCAATTCTCTAGTGCTGCCTACATGTCCGGACTACTTCCATTGGATCCACGAGGACCTACGACCATGGGCTCATTCTCCAGTGCTGCCTACATGTCCGGACTACTTCCATTGGATCCACGAGGACCTACAACCGTGGGCTCAAACAGGAATATCAAGGGATATGATTGAAAAAGCAAAACCAACGGCTAATTTCAAGCAAGTAGTGCTAGTGATCGTGAACAGAAAGGCTTATGTGGAGACATATCGACTGTCATTTCAGAGCCAAGATACTTTTACGCTATGGGGAGTCTTACAATTACTACGGAACCTTCAATTCTCATTTCTCTACCGGAAGTACCCGGGGAAATTGCCTGATTTGGACATCATGTTTGATTGTGGCGATCGACCTGTTATTTTATCGAAACTATATGTCAGGACCAACTTTAAGGGCCCACCTCCGTTGTTTCGATACAGTGGGGATGATTCTACGTTAGACATAGTGTTTCCTGATTGTTTTCTTTGGTGTAGGCCGGAGATAAATATAAAGCCATGGGAGCCACTGCTAAACGATCTAATGGAAGGAAATAAGAAGAGAGGTTGGGTTAGTAGAGAACCTTTTGCTTATTGGAAGGGCAATCCATTAGTTGCTCCAACAAGGCAAGACCTCCTCAAGTGTAACGATTGGTCCCGAGAATTGCAGCATGGATTTAAGGAGTCGGACCTTGCAAGCCAATGCATACATAGGTATAAGATCTATATCGAAGGTTCAGCTTGGTCTGTAAGTCAGAAATACATCCTTGCATGTGACTCAATGACGTTATTACTCATGCCTCGATACTATGATTTCTTCACGAGAAGTTTGGTCCCAATGCATCACTATTGCCCAATAAAGAACGATGACAAATGCCAGTCAATAAAGTTTGCAGTCGATTGGGGCAATAAGGAACAACACAAGGCACAGGAGATTGGAAAGAAAGCTAGTAGATTCATTCAAGAGGAACTGAAGATGGAATATTTGTATGACTACATGTTTCATCTTTTATCGACATATTCGTGTCTCTTAACCTTCAATCCGACGATCCCGAAGACTGCTACTGAGCTTTGTTTGGAAGCGATGGCTTGCAAAGCGGGTGGATTAATGAGAAAATTCCTGGAGCATTCGTTGATAAAAAGTCCTTCGGATAAATTGCCTTGCACCATGCCTCCACCTTACGATCCTTTGTCTCTTCGGAACGGTATTTTGACAAGAGAAAATTCGATCAAGGAAGTGGAGGAAATGAAGAAAATTTCTCAAGAAAATCAAAGAAAACCGATTAAGATTTAG 1635 43.85 MAGAGVTIHVEAAGDLWFDLHSMLDQTGLSLWLLPGTSTRENEEQIKEQLIKNLHGRVMWLARLMKLKRNSGEILKAPRVKLEIPLNCSAHGQLKTCPSNYPINIGLKDVLNSLVLPTCPDYFHWIHEDLRPWAHSPVLPTCPDYFHWIHEDLQPWAQTGISRDMIEKAKPTANFKQVVLVIVNRKAYVETYRLSFQSQDTFTLWGVLQLLRNLQFSFLYRKYPGKLPDLDIMFDCGDRPVILSKLYVRTNFKGPPPLFRYSGDDSTLDIVFPDCFLWCRPEINIKPWEPLLNDLMEGNKKRGWVSREPFAYWKGNPLVAPTRQDLLKCNDWSRELQHGFKESDLASQCIHRYKIYIEGSAWSVSQKYILACDSMTLLLMPRYYDFFTRSLVPMHHYCPIKNDDKCQSIKFAVDWGNKEQHKAQEIGKKASRFIQEELKMEYLYDYMFHLLSTYSCLLTFNPTIPKTATELCLEAMACKAGGLMRKFLEHSLIKSPSDKLPCTMPPPYDPLSLRNGILTRENSIKEVEEMKKISQENQRKPIKI 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2258358 2265497 + BLOR21026 Blo09g00111 64738

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00111 544 SMART cap10 226 461 IPR006598 -
Blo09g00111 544 PANTHER GLYCOSYLTRANSFERASE 70 136 - -
Blo09g00111 544 PANTHER GLYCOSYLTRANSFERASE 140 537 - -
Blo09g00111 544 Pfam Glycosyl transferase family 90 140 530 IPR006598 -
Blo09g00111 544 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 70 136 - -
Blo09g00111 544 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 140 537 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00111 - - - fve:101293348 582.793
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo07g00411 Blo09g00111 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00641 Blo-Chr4:5581370 Blo09g00111 Blo-Chr9:2258358 1.49E-21 dispersed
Blo09g00111 Blo-Chr9:2258358 Blo12g00035 Blo-Chr12:2347431 2.84E-165 dispersed
Blo11g00924 Blo-Chr11:19448419 Blo09g00111 Blo-Chr9:2258358 2.06E-07 dispersed
Blo09g00110 Blo-Chr9:2187018 Blo09g00111 Blo-Chr9:2258358 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g671 . . . . Bpe03g00287 . Bma10g01223 . Cmo16g00132 Cmo18g01270 . . . . Sed13g0125 . . Bhi01g01320 Tan01g0251 Cmetu09g0720 . Hepe07g0158 Mch10g0154 . . . . . . . . . . . Cone15ag0089 Lsi05g01226 . . . Blo07g00411 Blo09g00111 . . . . . . . . . Cma16g00126 Cma18g01247 . . . . Bhi12g00232 . . Lac11g2111 Hepe06g1560 . Lcy12g1668 . . . . . . . . . Chy06g00947 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000256 4 8 4 4 3 4 1 4 5 4 4 4 6 5 5 5 4 11 3 4 5 4 5 6 6 7 5 8 8 9 155
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo09g00111 Blo_Chr09 FPKM 1.418011 0.0 16.556906 16.180292 71.252365 80.808685 67.994926 11.981724 11.6372 10.999177