Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00224 ATGATTTCTGTTGCGTCCTCCGTTGAAGCACAACAGTCGGAGCTTTCTCCGACGGCGGTTAAATCACCGTCACCTAACATTCTTAGTAAGGTGGATTCCGAAATTTCCGTCATCTTCCGATCGAAATTGCCGGATATTCCCATCTCCAATCACCTCCCTCTTCCCACCTATTGCTTCGAGCGCCTCTCTGAGTTCTCCGAACGGCCATGTCTGATAGTCGGATCCACGGGTATAACCTACACTTTCGCAGAAACCCACCTCATTTCCAAAAGAGTTGGAGCCGGATTGACCAGTCTGGGCATTAAAAAGAACGACGTCATAATGATTCTCCTCCAAAATTCCGCTGAATTCGTCTTCACTTTCATCGGCGCAGCCATGATCGGCGCCGTCACCACCACGGCCAACCCGTTCTACACCGGCGCAGAAGTTTTCAAGCAAATTAAATCATCCGGCACCAAACTGATTGTAACGCAGTCGCAATACGTTGAAAAACTCCGGGAGCCAACAGAAAACGACCCCAAGCTCGGCGAGGATTTCACAGTAATCACCATAGACAACCCGCCGGAGAAATGCCTGCACTTCTCAGCAATTTCGGAGGCTAACGAGGCCGGCCTTCCGGCCACTGCCATCGACGCAAACGACCCCGTGGCGTTGCCGTTTTCCTCCGGCACCACTGGGCTACCGAAGGGAGTAATTCTTACCCACAAAAGCTTAATAACAAGCGTAGCTCAGCAAGTAGACGGAGAGAATCCAAATCTCTATCTAACTCCAGACGACGTCGTTTTATGCGTCCTCCCACTATTTCACATATACTCTCTCAATAGCGTTCTTTTATGCTCCTTGAGAGCTGGGGCGGCCGTTTTGCTCATGCAAAAGTTTGAGATAGGGGCATTTTTAGAATTAATCGTCCGTCACAAGGTGTCGGTTGCTGCAGTGGTGCCGCCGCTTGTGTTGGCTCTCGCAAAAAACCCAAAGGTGGCGGAATTCGACCTCAGCTCCATCCGGGTGGTGTTGTCGGGGGCGGCTCCGCTAGGGAAGGAGCTCGAGGAGGCCCTCAAGAGCCGACTGCCCCTAGCCACTCTTGGACAGGGGTATGGAATGACTGAAGCTGGACCAGTGCTGTCGATGAGCTTGGGGTTTGCACGTCAGCCATTTGCGACCAAGTCGGGGTCATGCGGGACGGTGGTCAGAAATGCCGAGCTGAAAGTCATCGACTCTGACACCGGAGCATCCCTCGGCTATAATCAGCCCGGAGAGATATGCATTCGTGGGTCCCAAATCATGAAAGGGTATTTGAATGATGATGAGGCCACAAGAAATACCTTGGATGTCGAAGGATGGCTTCACACCGGCGACATTGGCTATGTCGACGATGACGAAGAAGTTTTCATAGTAGATAGAGTGAAGGAGCTCATTAAATTCAAAGGATTCCAGGTGCCACCAGCTGAGCTTGAGTCTCTTCTTGTGAGCCATCCATCAATAGCAGATGCAGCAGTGGTGCCCCAGAAAGATGGAGTTGCTGGGGAAGTTCCCGTGGCATTTGTTGTTCGTTCAAATGGCTTCGATCTCACTGAAGAAGACGTCAAGGAATTCATTGCCAAACAGGTGGTGTTCTACAAGAAACTGCACAGAGTATACTTTGTGAATGCAATTCCAAAGTCTCCGGCGGGCAAGATTTTGAGAAAAGTTTTAAGAGCGAAGCTTGCATCATCTTAG 1716 50.64 MISVASSVEAQQSELSPTAVKSPSPNILSKVDSEISVIFRSKLPDIPISNHLPLPTYCFERLSEFSERPCLIVGSTGITYTFAETHLISKRVGAGLTSLGIKKNDVIMILLQNSAEFVFTFIGAAMIGAVTTTANPFYTGAEVFKQIKSSGTKLIVTQSQYVEKLREPTENDPKLGEDFTVITIDNPPEKCLHFSAISEANEAGLPATAIDANDPVALPFSSGTTGLPKGVILTHKSLITSVAQQVDGENPNLYLTPDDVVLCVLPLFHIYSLNSVLLCSLRAGAAVLLMQKFEIGAFLELIVRHKVSVAAVVPPLVLALAKNPKVAEFDLSSIRVVLSGAAPLGKELEEALKSRLPLATLGQGYGMTEAGPVLSMSLGFARQPFATKSGSCGTVVRNAELKVIDSDTGASLGYNQPGEICIRGSQIMKGYLNDDEATRNTLDVEGWLHTGDIGYVDDDEEVFIVDRVKELIKFKGFQVPPAELESLLVSHPSIADAAVVPQKDGVAGEVPVAFVVRSNGFDLTEEDVKEFIAKQVVFYKKLHRVYFVNAIPKSPAGKILRKVLRAKLASS 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10083214 10086472 + BLOR21139 Blo09g00224 64851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00224 571 CDD 4CL 48 564 - -
Blo09g00224 571 SUPERFAMILY Acetyl-CoA synthetase-like 49 570 - -
Blo09g00224 571 Gene3D - 469 570 IPR045851 -
Blo09g00224 571 ProSitePatterns Putative AMP-binding domain signature. 218 229 IPR020845 -
Blo09g00224 571 Pfam AMP-binding enzyme C-terminal domain 483 558 IPR025110 -
Blo09g00224 571 Gene3D - 29 468 IPR042099 -
Blo09g00224 571 PANTHER 4-COUMARATE--COA LIGASE 3 38 567 - -
Blo09g00224 571 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 38 567 - -
Blo09g00224 571 Pfam AMP-binding enzyme 61 474 IPR000873 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00666 Blo-Chr1:7738378 Blo09g00224 Blo-Chr9:10083214 0 dispersed
Blo03g01294 Blo-Chr3:39269528 Blo09g00224 Blo-Chr9:10083214 1.02E-136 dispersed
Blo06g00632 Blo-Chr6:29287582 Blo09g00224 Blo-Chr9:10083214 0 dispersed
Blo07g00521 Blo-Chr7:13331488 Blo09g00224 Blo-Chr9:10083214 0 dispersed
Blo09g00224 Blo-Chr9:10083214 Blo05g00175 Blo-Chr5:1565679 0 dispersed
Blo09g00224 Blo-Chr9:10083214 Blo10g00493 Blo-Chr10:10700215 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00224 K01904 - jre:108988342 887.871