Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00251 ATGTCCCACATTGATCTGGAATCCGGCGGCCACCAACGTTCGGTAACGGGAAGTGACGTAAGCATCGAGGATAGCGTCTACTTCTCCGACGCCGACGAGGATTTCTGCTATTCTCAGTTCTTCTCGACAAACGGCGGTTCTTACGACGAGCACAGGTCCGCCCTCGGCCTCGCAGGGATCCTTTCGGCTTCTCAAAGAGCGTCATCGGCGTCCGATCCTGCGGTGGAAGTCGAAATCGAAATTGGGGTAGCTGAAATCAAGGCGCATTTGGCTAAAGTAGAGGGAGATTGCAGAATTTGTCATCTGGGTTTGGAAAGCAACAGCCGGGAGTCCGGCGTTCCGATCGAATTGGGCTGTTCTTGCAAGGAGGATTTGGCTACTGCCCATAAGCACTGTGCTGAAACCTGGTTCAAAATGAAAGGAAACAAGACGTGCGAGATTTGTCATTCGATTGCACGGAATGTGCTGGGAGCCCACGAGATTGAGCTGATGGAGCGGCCCAACGAGACTGGCAATGCCTCCTCGATTGCATCGGCTCCGGCCCCTCCTGCAGAGAGCCAAAGGTTCTGGAGTGGACGTAGGTTCCTGAAATTTCTGCTTGCCTGTGTGGTGTTTGCATTTGTCATTTCATGGCTCTTCCACTTCAATGTTCCGTCGTAG 660 53.03 MSHIDLESGGHQRSVTGSDVSIEDSVYFSDADEDFCYSQFFSTNGGSYDEHRSALGLAGILSASQRASSASDPAVEVEIEIGVAEIKAHLAKVEGDCRICHLGLESNSRESGVPIELGCSCKEDLATAHKHCAETWFKMKGNKTCEICHSIARNVLGAHEIELMERPNETGNASSIASAPAPPAESQRFWSGRRFLKFLLACVVFAFVISWLFHFNVPS 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11365096 11366678 - BLOR21166 Blo09g00251 64878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00251 219 Pfam RING-variant domain 97 148 IPR011016 GO:0008270
Blo09g00251 219 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 156 IPR013083 -
Blo09g00251 219 ProSiteProfiles Zinc finger RING-CH-type profile. 89 155 IPR011016 GO:0008270
Blo09g00251 219 PANTHER OS01G0850200 PROTEIN 2 219 - -
Blo09g00251 219 SMART ringv_2 96 149 IPR011016 GO:0008270
Blo09g00251 219 CDD RING_CH-C4HC3_MARCH 97 149 - -
Blo09g00251 219 PANTHER ZINC FINGER, RING-CH-TYPE 2 219 - -
Blo09g00251 219 SUPERFAMILY RING/U-box 96 151 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo07g01162 Blo09g00251 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00251 Blo-Chr9:11365096 Blo13g00786 Blo-Chr13:30606425 1.30E-36 dispersed
Blo14g00175 Blo-Chr14:1364515 Blo09g00251 Blo-Chr9:11365096 4.12E-10 wgd
Blo07g01162 Blo-Chr7:31465903 Blo09g00251 Blo-Chr9:11365096 9.95E-119 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00251 - - csv:101218915 314.694