Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00256 ATGCTTCAAATTCGGCTTAGTAGGATTCCTGCTGCGGAAGGTGGGATTGGGGTAAAGCCTTTGCCTGCTGACTCTGTTACAGTTGCATGCCCAGACCACCTTGTCCTAGCTGATCTGCCTGTGGCAAAGGCCATTGGTTCAGCGACCACTGCCTCCCTTGTCAAGTCTGTGGGTCGCCGGTCACGCCGTCAACTTGGAGAACGCCTGCATTTTTGTGTTCGATGTGATTACCCCATTGCTATCTATGGCCGCCTGAGCCCTTGTGACCATGCCTTCTGTCTGGATTGTGCGAGGAGTGATTCAATTTGTTATCTTTGTGATGAACGTATTCAGAAGATCCAAACAGTTAAAATGATGGAGGGCATCTTCATTTGTGCAGCACCTCATTGTCTCAAGTCCTTTATGAAGAGGACTGAATTTGAATTCCACATTCATGGGAATCATGCTGACCTACTTCAGCCAAATCCTGAGAAAGATGATGGAAATGAATCTGAGGCTCAGAGTAACAAACAATCTACAGCTTCTGATTCAACTGTCCGAGGTCCACTAAGGCAAGTATTTTCTCCGGGCTCCAATACCCAGCATCTAGATAGGGAAGACAAAGCTCAGCGTCAACAATCTAGGGACCAATCTTGGTCAGCCACACTTCCAAAACAGCCTACAAGTTTTGGCCAACCCCAACATAACCTATCAGACTCTCTACCGGATGACAGCCAACCACAAACCCTTGACTTTGAAACCCAAGGTGCTCCATATCAGGAATCCGGCTTGTTTCTGGATAAGCAACAAGGAATTCTATCCGAGGCGCCATTTTCTGAATATCCACCCATGCATTCTGTTCAGCCACCAAGTTTTGTGGTACCAATGACCTCAAATTTAATGTTGACTCCCCCTCTACCATTTGTTTATCCTTCTTTTCCAACTGAGGGATCTCAACAGTTTTACAGTGCCGCCTATGAAGTGGCCAGGCAAGATTCTGCTGCACCTCAAGTAGGATCAGAGCAAGGTTCGTTGTTGGGTTTCCCGCCATCGGTAGGCCCGGGTTTTTCAGGAAGTTATCAGCAGCCCTGGAATGCAGTGAAAGTCAGTCCTTTTGAACCTTCTTCAGGGGGTCAAGGAATTTCGGATGGTTTGGATGATTCTCAAGTGAAAGGTGGGTTCTATTCGGCTGAGTATGGGCGCCATCCAGGAAATGCTTCCATTCTGCCTTTGGCTAGTAAGGGGCTTGAACCAGTGCAGAGTGGCAACGCAATGGATCTTTGGGATGGGAAGGGTATATTGGCACCACAGCCTATGCCATTTTCTGCTCGGCCACCCCCTCCGCAACCCCAGTCCTCACAACACATGCGAGGTAAATTTTATTCGGGCGAAATGGGTCATGATGGACAGGGGTATGGATGGCAGCACGAGAACAACGATAATTTTGGTGGTGGTTTGGACTAA 1443 48.16 MLQIRLSRIPAAEGGIGVKPLPADSVTVACPDHLVLADLPVAKAIGSATTASLVKSVGRRSRRQLGERLHFCVRCDYPIAIYGRLSPCDHAFCLDCARSDSICYLCDERIQKIQTVKMMEGIFICAAPHCLKSFMKRTEFEFHIHGNHADLLQPNPEKDDGNESEAQSNKQSTASDSTVRGPLRQVFSPGSNTQHLDREDKAQRQQSRDQSWSATLPKQPTSFGQPQHNLSDSLPDDSQPQTLDFETQGAPYQESGLFLDKQQGILSEAPFSEYPPMHSVQPPSFVVPMTSNLMLTPPLPFVYPSFPTEGSQQFYSAAYEVARQDSAAPQVGSEQGSLLGFPPSVGPGFSGSYQQPWNAVKVSPFEPSSGGQGISDGLDDSQVKGGFYSAEYGRHPGNASILPLASKGLEPVQSGNAMDLWDGKGILAPQPMPFSARPPPPQPQSSQHMRGKFYSGEMGHDGQGYGWQHENNDNFGGGLD 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11436136 11438639 + BLOR21171 Blo09g00256 64883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00256 480 MobiDBLite consensus disorder prediction 207 244 - -
Blo09g00256 480 MobiDBLite consensus disorder prediction 166 193 - -
Blo09g00256 480 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 123 IPR013083 -
Blo09g00256 480 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI 1 452 - -
Blo09g00256 480 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 452 IPR040383 GO:0016567|GO:0061630
Blo09g00256 480 ProSitePatterns Zinc finger RING-type signature. 88 97 IPR017907 -
Blo09g00256 480 MobiDBLite consensus disorder prediction 428 480 - -
Blo09g00256 480 MobiDBLite consensus disorder prediction 149 165 - -
Blo09g00256 480 MobiDBLite consensus disorder prediction 149 244 - -
Blo09g00256 480 CDD RING-HC_HAKAI_like 70 106 IPR040380 -
Blo09g00256 480 ProSitePatterns Zinc finger C2H2 type domain signature. 125 148 IPR013087 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00256 K15685 - qsu:112018474 603.979