Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00279 ATGAATTTTCCCTGCTTAAACCCACAGGACACTATTTCAAATGGTAAATCTGGAACTAGAGCTCAGTGTCTAAAGAGTGCAACCAGTGCGTTAAAGGACGGTAAAAATGTACTAATAGACAGATGCAACATGGAAAAAGAACAACGGGAAGATTTCGTTAAGCTTGGTAGTTCCCAAGTGGATGTACATGCTGTCGTCCTGGACCTTCCTGCACAACTTTGTATTTCTCGATCTGTTAAGCGCACTGGTCATGAAGGAAACCTACAAGGTGGCAAAGCTGCTGCAGTAGTAAATAAAATGATGCAGAAGAAAGAATTGCCTAAACTCAGTGAAGGGTTCACTCGTATCACTTTCTGTCAGAATGAAAGGGATGTTCAATCCACACTCAATACATATAGTTCTCTCAGTCCTTTGAATACCCTTCCGCATGGATGCTTTGGTCAGAAGAATCCAAGTGCAAAAGTGCAACTTGGCATAATGATGTTCCTCAAGAAAGCTGATGATCATACTCTTACAGGATATGAAGCACCAAGCATTCAGAATTCATCTCCTCAAACTGCAGAAATTAAGAGTACCTGCCGTGAAATTATATCTTCAGTTTCATCTCACTCCAATAAAGAGTTAAAGGAAGGAGACGATCATATGGTCAAGTCTTTTGAAGGCAACAGATTTTCAAATAATGCTCAAACTCTTGCATTTCCGTCTTTTTCAACGGCAGATTTTCAATTCAGTCTTGAAAAGGCATCTGAGATTATTGTTGAGAAAGTTGAGGAATTTATGGACAAGCTTGGGAATTCCAGGCTTGTTTTAGTAGACCTGAGCCATAGATCAAAGATTTTGTCTTTGGTCAAGGCAAAAGCTGATCAGAGAAACATTGACTCGAGTAAGTTTTCAACATTTGTGGGAGATATAACTCAACTTTATTCAAAAGGTGGCTTGCGCTGCAATGTCATTGCTAATGCTGCAAACTGGAGGCTGAAACCTGGAGGTGGAGGCGTGAATGCTGCCATTTTCAAAGCCGCTGGTCCTGCACTGGAAGTGGCAACCAAAGAGCAGGGAAAGTGTCTTCAACCTGGTAATGCAGTTGTAGTTCCTCTACCTTCAGCTTCTCCATTGTTCAAAGAGGAAGGCGTGACTCATGTCATACATGTTCTTGGACCAAATATGAATTCTCAAAGGCCAAATTGCCTCAATAATGATTATAACAAAGGTTCTGAACTTCTCCGAGCGGCTTATACTTCTCTATTTGAAGGCTTTCTCTCTTTAGTGAGAAACCAATCAAATTTAGCTAAAGATTGTAGTGATCACTTTGAGTCAAGACTTTTAGAGTCACCAAAAGAAGCTCAGGGTGTGGCTAGGAATCCGTTTTATGGTGGTGACCAGAAGATGAAGAGAGAGAGCGTCCTAGAGTTCGAAAAGAGCAAAAAATGTAAAGGATATCAGTCAGAAGATAATACTGACCTTGGAAGTGTGAATACAAAGAGTAAGAAAATTGGCGAAAACACAAGCCAGGCATGGGGATCTTGGGCTCAATCGCTGTACAAAATTGCTATGGAGCCTGAGACTCATAAGGGTGAAGTTTTGGAGACATCAGATGATGTTGTTGTCCTAAAGGATCTTTATCCGAAGGCACAGAAGCATGTCCTAGTTTTGGCTCGTGCCGACGGCCTTGAATCCTTGGCCAATGTCAGGGCTGATCACCTTCAGTTGTTGAGGAAGATGCATGCAGTGGGCATGAAGTGGGCAGAGAAGTTCATACATGAAGATGCTTCATTGGTCTTTCGCCTTGGATATCACTCAGCCCCGTCAATGCGGCAACTTCATCTTCATATGATTAGCCAGGATTTCAATTCGAAACACTTGAAGAATAAGAAACATTGGAATTCTTTTAATACTGCTTTCTTTAGGGACTCTGTTGATGTAATTGAGGAGGTCGATATTCATGGGAAAGCAACAGTGAAGGATGACGAATCTCTGATATCTATGGAGTTACGATGCAACCGATGTAGAAGTGCTCACCCCAACATTCCCAAATTGAAATTACATATCAGCCACTGTGGAGCTCCCTTTCCTTCCCATCTTCTTCAACATAGTCGTCTTGTTCAGGCACCAACTATTGCTAATGATGCTCCATAA 2136 41.67 MNFPCLNPQDTISNGKSGTRAQCLKSATSALKDGKNVLIDRCNMEKEQREDFVKLGSSQVDVHAVVLDLPAQLCISRSVKRTGHEGNLQGGKAAAVVNKMMQKKELPKLSEGFTRITFCQNERDVQSTLNTYSSLSPLNTLPHGCFGQKNPSAKVQLGIMMFLKKADDHTLTGYEAPSIQNSSPQTAEIKSTCREIISSVSSHSNKELKEGDDHMVKSFEGNRFSNNAQTLAFPSFSTADFQFSLEKASEIIVEKVEEFMDKLGNSRLVLVDLSHRSKILSLVKAKADQRNIDSSKFSTFVGDITQLYSKGGLRCNVIANAANWRLKPGGGGVNAAIFKAAGPALEVATKEQGKCLQPGNAVVVPLPSASPLFKEEGVTHVIHVLGPNMNSQRPNCLNNDYNKGSELLRAAYTSLFEGFLSLVRNQSNLAKDCSDHFESRLLESPKEAQGVARNPFYGGDQKMKRESVLEFEKSKKCKGYQSEDNTDLGSVNTKSKKIGENTSQAWGSWAQSLYKIAMEPETHKGEVLETSDDVVVLKDLYPKAQKHVLVLARADGLESLANVRADHLQLLRKMHAVGMKWAEKFIHEDASLVFRLGYHSAPSMRQLHLHMISQDFNSKHLKNKKHWNSFNTAFFRDSVDVIEEVDIHGKATVKDDESLISMELRCNRCRSAHPNIPKLKLHISHCGAPFPSHLLQHSRLVQAPTIANDAP 711
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 12088313 12091004 - BLOR21194 Blo09g00279 64906
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00279 711 Gene3D - 508 688 IPR036265 -
Blo09g00279 711 Pfam AAA domain 20 86 - -
Blo09g00279 711 Gene3D - 2 134 IPR027417 -
Blo09g00279 711 ProSitePatterns HIT domain signature. 595 613 IPR019808 -
Blo09g00279 711 SMART YBR022w_8 296 574 IPR002589 -
Blo09g00279 711 Pfam C2HE / C2H2 / C2HC zinc-binding finger 631 684 IPR032566 -
Blo09g00279 711 SUPERFAMILY Macro domain-like 225 270 IPR043472 -
Blo09g00279 711 SUPERFAMILY HIT-like 497 670 IPR036265 -
Blo09g00279 711 Gene3D Leucine Aminopeptidase, subunit E, domain 1 276 417 IPR043472 -
Blo09g00279 711 SUPERFAMILY Macro domain-like 279 417 IPR043472 -
Blo09g00279 711 ProSiteProfiles Macro domain profile. 284 488 IPR002589 -
Blo09g00279 711 Pfam Scavenger mRNA decapping enzyme C-term binding 518 626 - -
Blo09g00279 711 Pfam Macro domain 319 415 IPR002589 -
Blo09g00279 711 Gene3D Leucine Aminopeptidase, subunit E, domain 1 174 275 IPR043472 -
Blo09g00279 711 PANTHER APRATAXIN-RELATED 9 705 - -
Blo09g00279 711 PANTHER APRATAXIN 9 705 IPR026963 GO:0003677|GO:0006281|GO:0033699
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00279 K10863 - qsu:112040136 943.725