Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00283 ATGGAAGAAGCTCCATATTTATATGTATGGGAGTTGATTTCACTCAAGAGACCATTTTTGATAGAGCTTGAGAGGCGAGGCAGAGAAAGACGGCGAATAGGAGGAAGAAGCAGTGCAGTCATGTCTGATCAGATGGCCACTGCAACTCCCGCGTGGCTTGACAGCGGTGACAACGCGTGGCAATTGACATCCTCCACGCTCGTAGGTCTGCAAAGTATGCCGGGGCTGGTGATTCTCTACGCCAGCATCGTAAAGAAGAAATGGGCGGTGAACTCGGCTTTCATGGCCCTCTACGCCTTCGCCGCCACCCTCATATGCTGGGTTCTGATCAGCTACCGCATGGCCTTTGGGGACGAATTGCTTCCACTCTGGGCCAAAGGGGCGCCTGCTCTCGGCCAGTACTACCTCAGGAACCAAGCCCAAATCCCGGAAAGCACCCACTTTCGAGAAGATGGCTCGACTGAGACTCCCAAGATCGAGCCCTTGGTTCCAATGGCGTCGCTCGTTTACTTCCAGTTTACATTTGCTGCAATTACGCTGATTTTATTGGCTGGGTCTGTTCTTGGGCGGATGAACATCAAAGCTTGGATGGCTTTTGTCCCTCTGTGGCTTATTTTTTCCTACACGGTCGGAGCCTACAGTTTATGGGGCGGCGGGTTTCTCTTTCACTGGGGCGTCATCGATTACTCCGGCGGCTATGTCATTCACCTCTCCTCCGGAATCGCCGGCTTCACCGCTGCTTATTGGGTTGGTCCGAGAATAAAAAGCGATAGGGACAGATTCCCACCCAATAACGTCTTGCTTATGCTTGCCGGGGCTGGGCTGCTTTGGATGGGCTGGTCGGGGTTCAACGGCGGCGCGCCGCGGGCGGCCAATGTTGTGGCCTCAATTGCAGTGTTGAACACAAACGTAAGTGCGGCGACGAGTCTTCTTGTGTGGACCACTTTGGACGTGATTGTCTTCGGAAAGCCTTCGGTGATCGGAGCTGTCCAGGGCATGATCACCGGCCTCGCTTGCGTTACTCCGGGAGCAGGGGTGGTCCAACCATGGGCGGCCATAGTAATGGGAATCCTTTCTGGTAGCATTCCATGGGTGTCTATGATGATTCTTCACAAGAAGTCTACCCTTCTACAAAAGGTGGACGACACTCTAGGAGTATTCTACACACATGCTGTTGCAGGGCTTTTGGGTGGCCTTCTCACTGGGCTTCTGGCACAGCCATCGCTGTGCAAGCTCAGCCTGCCAGTGACCAACACAAAAGGCGCATTCTACGGACAAAGTGGGGGAATGCAATTCTTCAAACAACTGGTTGCAGCCATGTTCATAATAGGGTGGAACGTTGTCTCCACCACAATCATACTCTTATTTATTAGGGTTTTCATTCCGCTGAGAATGCCGGAGGAGGAGCTTCTCGTCGGAGATGATGCAGTTCATGGGGAGGAGGCTTACGCACTCTGGGGAGACGGAGAGAAATTCGACCCAACAAGACATGGTTGGAACTTGCCTTCTCATGTAGGGGAATCAGCTACTTCCCCATATGTCAATGGTGCCAGAGGTGTGACCATTGTTTTGTAA 1575 52.7 MEEAPYLYVWELISLKRPFLIELERRGRERRRIGGRSSAVMSDQMATATPAWLDSGDNAWQLTSSTLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAATLICWVLISYRMAFGDELLPLWAKGAPALGQYYLRNQAQIPESTHFREDGSTETPKIEPLVPMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAYSLWGGGFLFHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRIKSDRDRFPPNNVLLMLAGAGLLWMGWSGFNGGAPRAANVVASIAVLNTNVSAATSLLVWTTLDVIVFGKPSVIGAVQGMITGLACVTPGAGVVQPWAAIVMGILSGSIPWVSMMILHKKSTLLQKVDDTLGVFYTHAVAGLLGGLLTGLLAQPSLCKLSLPVTNTKGAFYGQSGGMQFFKQLVAAMFIIGWNVVSTTIILLFIRVFIPLRMPEEELLVGDDAVHGEEAYALWGDGEKFDPTRHGWNLPSHVGESATSPYVNGARGVTIVL 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12124845 12127572 - BLOR21198 Blo09g00283 64910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00283 524 PANTHER AMMONIUM TRANSPORTER MEP2 46 521 IPR001905 GO:0008519|GO:0016020|GO:0072488
Blo09g00283 524 SUPERFAMILY Ammonium transporter 52 465 - -
Blo09g00283 524 TIGRFAM amt: ammonium transporter 57 483 IPR001905 GO:0008519|GO:0016020|GO:0072488
Blo09g00283 524 ProSitePatterns Ammonium transporters signature. 228 253 IPR018047 GO:0008519|GO:0016020|GO:0072488
Blo09g00283 524 Pfam Ammonium Transporter Family 59 483 IPR024041 GO:0008519|GO:0016020|GO:0072488
Blo09g00283 524 PANTHER AMMONIUM TRANSPORTER 46 521 - -
Blo09g00283 524 PRINTS Rhesus blood group protein signature 353 371 IPR002229 GO:0005887
Blo09g00283 524 PRINTS Rhesus blood group protein signature 391 407 IPR002229 GO:0005887
Blo09g00283 524 PRINTS Rhesus blood group protein signature 172 188 IPR002229 GO:0005887
Blo09g00283 524 PRINTS Rhesus blood group protein signature 267 285 IPR002229 GO:0005887
Blo09g00283 524 PRINTS Rhesus blood group protein signature 298 320 IPR002229 GO:0005887
Blo09g00283 524 Gene3D Ammonium transporter AmtB like domains 33 486 IPR029020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00283 Blo-Chr9:12124845 Blo11g00430 Blo-Chr11:3750084 2.37E-22 dispersed
Blo07g01119 Blo-Chr7:31092759 Blo09g00283 Blo-Chr9:12124845 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00283 K03320 - zju:107430906 822.772