Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00297 ATGAAAATCACGAGGGAAAACCTCGGATCTTCTAGCACCAGACTTCGTCTTCATATTGGAGCTTTAAGGTTCGAATTTGGTTTGAAAAGCATGTACAAGTCACTAAGTACAGCGCAGAATGGAATTGGATACGTTGAAAGCGATCCATCAGGTCGGTATGGACGGTTCAAAGAAGTGCTAGGGGAAGGAGCTATGAAGACAGTGTATAGGGCATTTGATGAGGTGCTTGGAATGGAGGTGGCTTGGAATCAGGTTAAGCTCAAAGAGGCCTTCCACTCACCTGATGTATTGCAGAGGCTTTACTCTGAAGTACACCTCCTCAAAAACCTCAATCATTGCTCTATCATCCACTTCCATACATCCTGGATCGATATTAATTCTAGATCCTTCAACTTCATCACCGAAATGTTCACCTCCGGCACCCTTAGAGAGTATAGACGGAAATATCAGCAAGTGGATATAAGGGCAGTGAAAAACTGGGCCCGTCAGATTCTACACGGTTTGGCTTATCTGCATGAGCATGATCCTCCAGTGATCCATCGAGACCTCAAATGTGACAACATATTTGTCAACGGCCATCTCGGACAAGTCAAGATTGGAGATTTGGGTTTGGCTGCAATTCTTCAAGGATCCCAACTAGCTCACAGCGTCATAGGTACACCGGAATTTATGGCCCCAGAGCTATACGAAGAGGAATACAATGAGCTTGTTGATATATACTCGTTTGGAATGTGTGTCCTAGAGATGCTGACTTCACAGTACCCTTACAGCGAGTGCTCTAACCCTGCCCAAATCTACAAAAAGGGGAAATTGCCCCAAGCATTCTACCGAATTCAAGATAAGGAACTGCAGCGATTTGTGGAGAGATGCATAGGGCCTGCTTTGACGAGGTCAAATGCAAGAGAGCTCTTGCTGGATCCTTTTCTATCACCCGAGAGCTTACTTCCTGGTGGAACAGTAATGGTGGCTCCTCCATTAAGAAGCAAGGACATGACCATCACTGGAACGATGAATTCAGAGGACGATACAATTTTTCTTACAGTGCAGATTACAGATCAGGATGGTCAATCGAATAACATTTACTTTCCTTATGACATCGTGAAAGATACTGCAATTGATGTGGCTAATGAGATGGTAAAAGAGCTGGAAATTTGTGGGTGGGAGCCAATGGAAATATCTAAGATGATAGAGGAGCAAATCACTTCTCTACTTCCTGGTTGGAAGCAATTAGGCTCCCCACAATTTCATGATCAGCTCAGCTTCAGTTGTCAAGAAGAAGGAGAAGATGTTAACATCACACTCTGCCCATTATACTCAGATTCCTTGTACTCGTACTCCTCGTCTTCTCTCCCACCTCTCAACTCCTCGCACAAAACCCAGGATTTGCACGAACTGGGGGCAATTTCTAGCCACGGCTGCTGGCTTCAAGGAAACTTGTATATGGATGATGACGAAAAAAGTACAAATGGCTCTTTGAGTTCCTTTATGTACTCCGATATGAATTACTCGGCTGACTATGAAGATAAATCTCCATTCAATTCCAGAGGAGAAAACCCAGTGGGGATATCGAAGATGGGTAGAAAAGACATGTACAGACAAGGGTCCCTGATAAAAATGAATTCCGAGGGAAATCATGGCAGGAACAGTATCATGCGAAATCAAAGCTAG 1668 44.12 MKITRENLGSSSTRLRLHIGALRFEFGLKSMYKSLSTAQNGIGYVESDPSGRYGRFKEVLGEGAMKTVYRAFDEVLGMEVAWNQVKLKEAFHSPDVLQRLYSEVHLLKNLNHCSIIHFHTSWIDINSRSFNFITEMFTSGTLREYRRKYQQVDIRAVKNWARQILHGLAYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILQGSQLAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCVLEMLTSQYPYSECSNPAQIYKKGKLPQAFYRIQDKELQRFVERCIGPALTRSNARELLLDPFLSPESLLPGGTVMVAPPLRSKDMTITGTMNSEDDTIFLTVQITDQDGQSNNIYFPYDIVKDTAIDVANEMVKELEICGWEPMEISKMIEEQITSLLPGWKQLGSPQFHDQLSFSCQEEGEDVNITLCPLYSDSLYSYSSSSLPPLNSSHKTQDLHELGAISSHGCWLQGNLYMDDDEKSTNGSLSSFMYSDMNYSADYEDKSPFNSRGENPVGISKMGRKDMYRQGSLIKMNSEGNHGRNSIMRNQS 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12673059 12676321 - BLOR21212 Blo09g00297 64924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00297 555 Gene3D Phosphorylase Kinase; domain 1 39 135 - -
Blo09g00297 555 Gene3D - 342 431 - -
Blo09g00297 555 SUPERFAMILY Protein kinase-like (PK-like) 56 355 IPR011009 -
Blo09g00297 555 ProSiteProfiles Protein kinase domain profile. 54 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo09g00297 555 Pfam Protein kinase domain 57 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo09g00297 555 Gene3D Transferase(Phosphotransferase) domain 1 137 313 - -
Blo09g00297 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Blo09g00297 555 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK5-RELATED 35 525 - -
Blo09g00297 555 SMART serkin_6 54 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo09g00297 555 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 35 525 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00297 Blo-Chr9:12673059 Blo13g01016 Blo-Chr13:32507392 0 dispersed
Blo09g00297 Blo-Chr9:12673059 Blo12g00329 Blo-Chr12:18887379 1.06E-131 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84466 PF00069 Pkinase 7.60E-46 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00297 K08867 - cit:102622163 625.55