Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00308 ATGGTTTCCTCTCAATTTCCTGGTTTGACGGATTCCTGCAAGCCCAAGCTCATTCAGCATCAGTTTCTTTTTCCTCTCAATTCTGTTGATGCTGTGGCTGTTGATCACGTTGAGCTAGATTTCTCTGATGTTTTTGGTCCTGTACCTTTTAATGAAGTTGATTCAGCTAATCTCTGCCTAGAAGGAGAAAGAAAGCTTGTTTTTGTTGATCCAGAAGTCATTCACAATAGGTCACATTCTTTGGTCGGTCCCTCTTCGTACGTAAGTCAGTCATTTGGGCTCAGCAAGCTCACTATACATGAGAGTGAGGATTCAGGGGATCAAATTGAATTTATCAGTGAGTATGCTGGTGGAGAAATTCTGGAACCTTCAAATGATAATCATATGGTTGAGGGAGCTCTTGAAGGTGTAATTATGAATCCCACGAAGGCACAGGGTGTCGGAATCGATGACTTTGAGATTTTAAAGGTTGTGGGCGCTGGTGCTTTTGCAAAAGTTTATCAGGTAAGGAAAAAAGGTACATCAGAGATCTATGCAATGAAAGTTATGCGGAAAGACAAGATCATGGAGAAAAATCATGCTGAATACATGAAAGCAGAGAGGGATATTTTGACAAAAGTTGAACATCCTTACATTGTCCAGCTTAGATACTCCTTTCAAACTAAATATAGACTATATCTTGTTCTGGATTTTGTAAATGGGGGACACCTTTTCTTTCAGCTTTACCGCCAAGGCCTTTTCAGGGAGGAGCTTGCTCGTGTCTATGCTGCTGAGATTGTTTCTGCTGTTTCTCACCTCCATGACAATGGCATAATGCACAGAGATCTTAAACCTGAAAATATTTTACTAGATATTGATGGCCATGCGATGCTGACTGATTTTGGCCTAGCAAAGCAATTTGATGCAAATACAAGAACAAATTCTATGTGTGGAACGGTAGAATATATGTCACCTGAAATAGTTCTTGGAAAGGGCCATGACAAGGCTGCAGATTGGTGGAGCGTCGGAATTCTTCTGTTTGAGATGCTCACTGGGAAGCCTCCATTCACTGGGAATAGAGACAAAGTCCAGCGGAAGATAGTGAAGGATAAGATAAAGCTGCCATCGTTTTTGTCAAGTGAAGCACATTCACTTTTGAAAGGGCTGTTACAAAAGGATGCAAGCAAGCGCTTGGGAAATGGGCTGATGGGTGGCGAAGACATCAAGCGCCATAAATGGTTCAAGCCGATCAATTGGAAGAAATTGGAGTCAAGAGGTATTGAACCTTGTTTTCGGCCTGAAATTGCAGGGAAGCATTGTGTTGCCAACTTTGAGAAGCACTGGACCAACATGCCGATTGCAGATTCTCCAGTTGGCAGTCCGCAGGAAGGTGGAAATGTCTTCATGGGTTTTAGCTATGTTCTTTTTCGCTACGAGTATATTTATCTGTATGTTCTTCTTTCATGGTGCATATGGGATGCCCTGCTGCATGGCAAGGATAGCAGCGGGCTATGGACAGGCGGGAGCGGATGGGTTGCGCTGAAGAAGATTGGGTCAACACTGTCGGAAGAAGTCGCACTGGTGGGCGCGCTCAGGTGCATGGTCGGGTTGGCCAGCGAAGATTGCGCGATGATGTCTGATGAAGGTGCGCGGATGGGGGCGCTCGGGTGTGCAGGCGGGTTGGCCCGCGTAGTTCTCGCGCCTCAGCCCTCGCGCAGTCGCCCTCGCCCGTCGCCGTCGCCCGTCGTCCCTCAGGTACTTCACACTCTTCACTTCAGTTCAGGACTTCAGTCTTCTCGTTCCGACTTCCGAGTCCGAATTCAGCCTTCAGAGTTCGAGTGTCTCTCGACTCTTATCCCTCTCTGCAGTACAGGTTTTCGTTCGTTTTTGCTTCGTCTTAGCATCTCCAGGCTCCAGGCAGCAATGCAGACTACAACTGCCGAGCTCGTTGATCAATATTGGTAA 1944 46.14 MVSSQFPGLTDSCKPKLIQHQFLFPLNSVDAVAVDHVELDFSDVFGPVPFNEVDSANLCLEGERKLVFVDPEVIHNRSHSLVGPSSYVSQSFGLSKLTIHESEDSGDQIEFISEYAGGEILEPSNDNHMVEGALEGVIMNPTKAQGVGIDDFEILKVVGAGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAEYMKAERDILTKVEHPYIVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYRQGLFREELARVYAAEIVSAVSHLHDNGIMHRDLKPENILLDIDGHAMLTDFGLAKQFDANTRTNSMCGTVEYMSPEIVLGKGHDKAADWWSVGILLFEMLTGKPPFTGNRDKVQRKIVKDKIKLPSFLSSEAHSLLKGLLQKDASKRLGNGLMGGEDIKRHKWFKPINWKKLESRGIEPCFRPEIAGKHCVANFEKHWTNMPIADSPVGSPQEGGNVFMGFSYVLFRYEYIYLYVLLSWCIWDALLHGKDSSGLWTGGSGWVALKKIGSTLSEEVALVGALRCMVGLASEDCAMMSDEGARMGALGCAGGLARVVLAPQPSRSRPRPSPSPVVPQVLHTLHFSSGLQSSRSDFRVRIQPSEFECLSTLIPLCSTGFRSFLLRLSISRLQAAMQTTTAELVDQYW 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13196163 13203596 + BLOR21223 Blo09g00308 64935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00308 647 ProSiteProfiles AGC-kinase C-terminal domain profile. 408 476 IPR000961 GO:0004674|GO:0005524|GO:0006468
Blo09g00308 647 PANTHER RIBOSOMAL PROTEIN S6 KINASE 1 468 - -
Blo09g00308 647 ProSitePatterns Protein kinases ATP-binding region signature. 158 181 IPR017441 GO:0005524
Blo09g00308 647 SMART pkinase_C_6 408 468 IPR000961 GO:0004674|GO:0005524|GO:0006468
Blo09g00308 647 CDD STKc_AGC 158 407 IPR045270 GO:0004674|GO:0005524
Blo09g00308 647 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 1 468 - -
Blo09g00308 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Blo09g00308 647 ProSiteProfiles Protein kinase domain profile. 152 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo09g00308 647 SMART serkin_6 152 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo09g00308 647 SUPERFAMILY Protein kinase-like (PK-like) 149 474 IPR011009 -
Blo09g00308 647 Gene3D Phosphorylase Kinase; domain 1 149 448 - -
Blo09g00308 647 Gene3D Transferase(Phosphotransferase) domain 1 232 426 - -
Blo09g00308 647 Pfam Protein kinase domain 152 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo07g01100 Blo09g00308 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00308 Blo-Chr9:13196163 Blo06g01092 Blo-Chr6:34219324 1.32E-66 dispersed
Blo13g00035 Blo-Chr13:545508 Blo09g00308 Blo-Chr9:13196163 4.85E-171 transposed
Blo17g00656 Blo-Chr17:15549065 Blo09g00308 Blo-Chr9:13196163 2.57E-07 transposed
Blo07g01100 Blo-Chr7:30840272 Blo09g00308 Blo-Chr9:13196163 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84468 PF00069 Pkinase 6.20E-74 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00308 K04688 - jre:108986277 690.263