Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00319 ATGGATCCGCGTTGTAAGGGGTACTCCTATTCCATCAAAGACATTCAATTCAGCAACCAAGCTTTATTAGTTCATCCCAATCCGAATGCTGTAGTCGGGCCCAGATCTGAAAACGCCCTTTTAGATCATAGATTTGAGGAATTTCATTATGTTCCACCTGATCCCCCGCCTAGCAATATGGTATCTAGTTCGAGTAATATCACCTCATGTTCAAGTGCGAGCCACGGCGAAAATTCACCCGAAGATTGCGATTTTTCCGACGCAATTTTGGGGTACATCAGCCAGATTCTCATGGAAGAAGATATGGAGGAGAAAACTTGTATGCTTCAAGACTCTTTGGATTTTCAAGCCGCTGAGAAATCATTTTATGATGTTCTTGGCGAAAAGTATCCTCCTCTTCACGATCAGAACAGGCCTTACAGTAGTCAATATAATGAAATTTTAGATGATAATTCATTTGGAGATTATTATAATTATCTCACTAATATTTATGGAGAAAATGCTTATTTTGAGAATGATACTCATAATCAATTCCTTGTTGAAGATTTCTCACACATAGATAGCCTACCTTCTTGTGTTATTGATCAGTCAGTATATAGCTCGTCAAATAGTGTCATTAGTAGCATCGACAAGCTTGTGGACTCTTCGAACAGTTCTTTTTCGGTTCCTGAATTTAGTAATGGAAGCCAATCAATATGGCAGTTCAGGAAAGGGGTTGAAGAGGCGAAGAAATTTCTACCAAATGAAAATGGTTTATTTCTCAATCAAGGGCCAGAGGCTGGTGAGGTGGTCGTCAAGGTGGAGACTAGGGAAGGAAATGAGTTGTTGCCGTGTGAATCGAGGGGAAGAAAGAATTCTCTCAAGGAAGATGGAGATTTGGAAGAGAAGAGAAATAATAAACTAGCGGCTATTTTCGCCGACTCGACCTCACGAACTGAGATGTTTGACAATGTCTTACTTTGTAGTGAAGGCGAAGGGATGCGCAAATTGGCAGCCCTTCGCAATTCTTTACAGATGGCGAAACGGAGAAGTTTGGAGCAGAACGGACAATCAAAGGGATATAATGGAGGGAGGGGCCGGGGAAAGAAACAGAACGGGAAGAAGGAGGTGGTGGATTTGAGACTTTTGTTAATTAACTGTGCACAGGCTGTTGCTGCTGATGATCATAGGAATGCAAATGAATTGCTTAGGCAAATTAAGCAGCATTCGTCTCCTTTTGGAGACGGAAACCAAAGGTTAGCCCACTGCTTTGCGGAAGGGCTCGAGGCCCGGTTGGCTGGCATAGGAAGCCAGATATATAAAGGTCTTGTCAATAAGAGGACATCTGCTGCAGATCAGTTGAAAGCTTACCATTTATACCTGGCAGCCTGTCCGTTTCGGAAAATATCGAATTTTACATCCAATAGGACGATAAGGAGTATTGCAGCAAATTCAACTAGACTTCATGTCATAGACTTCGGCATTCTTTATGGATTTCAATGGCCAACCCTCATTCAGAGACTCTCATGGAGAAAAGGCGGTCCTCCGAAGCTTCGAATCACCGGAATCGAGTTTCCCCAGCCAGGCTTTCGACCAGCTGAGCGAGTGGAGGAAACGGGCCGTCGTTTGTCGAATTATGCGGAAAATTTCAAGGTGCCGTTCGAGTACAATCCCGTAGCGAAAAACTGGGAGACTGTTACCATTGATGATCTCAAGATAGAAGGTGACGAAGTATTGGTTGTTAACTGTTTGTACCGAGCGAAGAACTTGCGCGATGAGAGTGTGGCAGTGGAAAGTGCCCGAAATAAGTTTCTTCAAATTGTACGCAAAATAAATCCGAACATCTTCATCTATGGTGCTGTCAATGGATCGTATAATGCCCCCTTCTTCGTTACTCGTTTTCGAGAGGCACTCTTCCACTATTCTGCCATGTTTGACATGCTTGAAACTGTTGTCCCACGGGAGGATGGAGAGAGAATGTTGATCGAGAGAGAAATCTTTGGCCGAGAAGCTTTGAATGTTATTGCATGCGAAGGCTGGGAGAGAGTTGAAAGACCAGAGACCTATAAGCAGTGGCAGGTTCGAATCATGATGGCCGGATTCTTGCAGCTTGAAGTAGACAGAGAGATAATGAAGACTGCAAAGGAGAAAGTAAGGGAAAGTTACCACAAGGATTTTGTAATCGACGAAGATAGCAAATGGATGCTACAGGGATGGAAGGGAAGAACTATATATGCCCTCTCTGCATGGAAACCTGTTTAG 2241 43.42 MDPRCKGYSYSIKDIQFSNQALLVHPNPNAVVGPRSENALLDHRFEEFHYVPPDPPPSNMVSSSSNITSCSSASHGENSPEDCDFSDAILGYISQILMEEDMEEKTCMLQDSLDFQAAEKSFYDVLGEKYPPLHDQNRPYSSQYNEILDDNSFGDYYNYLTNIYGENAYFENDTHNQFLVEDFSHIDSLPSCVIDQSVYSSSNSVISSIDKLVDSSNSSFSVPEFSNGSQSIWQFRKGVEEAKKFLPNENGLFLNQGPEAGEVVVKVETREGNELLPCESRGRKNSLKEDGDLEEKRNNKLAAIFADSTSRTEMFDNVLLCSEGEGMRKLAALRNSLQMAKRRSLEQNGQSKGYNGGRGRGKKQNGKKEVVDLRLLLINCAQAVAADDHRNANELLRQIKQHSSPFGDGNQRLAHCFAEGLEARLAGIGSQIYKGLVNKRTSAADQLKAYHLYLAACPFRKISNFTSNRTIRSIAANSTRLHVIDFGILYGFQWPTLIQRLSWRKGGPPKLRITGIEFPQPGFRPAERVEETGRRLSNYAENFKVPFEYNPVAKNWETVTIDDLKIEGDEVLVVNCLYRAKNLRDESVAVESARNKFLQIVRKINPNIFIYGAVNGSYNAPFFVTRFREALFHYSAMFDMLETVVPREDGERMLIEREIFGREALNVIACEGWERVERPETYKQWQVRIMMAGFLQLEVDREIMKTAKEKVRESYHKDFVIDEDSKWMLQGWKGRTIYALSAWKPV 746
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13372989 13375229 - BLOR21234 Blo09g00319 64946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00319 746 MobiDBLite consensus disorder prediction 340 365 - -
Blo09g00319 746 MobiDBLite consensus disorder prediction 340 354 - -
Blo09g00319 746 MobiDBLite consensus disorder prediction 52 80 - -
Blo09g00319 746 PANTHER SCARECROW-LIKE PROTEIN 9 40 745 - -
Blo09g00319 746 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 40 745 IPR005202 -
Blo09g00319 746 Pfam GRAS domain family 374 744 IPR005202 -
Blo09g00319 746 ProSiteProfiles GRAS family profile. 364 744 IPR005202 -
Blo09g00319 746 MobiDBLite consensus disorder prediction 60 79 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00319 Blo-Chr9:13372989 Blo13g01071 Blo-Chr13:32894745 0 dispersed
Blo17g00226 Blo-Chr17:2326381 Blo09g00319 Blo-Chr9:13372989 3.09E-60 dispersed
Blo09g00319 Blo-Chr9:13372989 Blo04g00113 Blo-Chr4:951849 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12767 PF03514 GRAS 1.50E-122 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00319 - - cit:102622070 933.324