Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00333 ATGGGTGCGATAAAGGCCGCCATAGCTGACGGAGTGCTGACGTTCATGTGGATTTTTTGTGCTTCCTCGATTGGGGTTCTTACTGCCGTCGTGTCCTCCGCCGTTGGAGTTTCTGGCCTTCCTCTCCCTTCCATATTCATAACCACTGTCATTATTTTCCTTCTCGTCTTCTTTTTCAACTTCGTCGGCAGCCTCTTGGGTGGGGCTAGCTTCAATCCCACCGGAACCACCGCCTTCTACGCTGCCGGCCTTGGCCCCGATTCTCTAATTTCCATGGCCCTTCGCTTTCCTGCTCAGGCTGCCGGAGCTGTCGGGGGTGCGCTAGCAATCAAGGAGGTGATGCCAGAACAGTACAAACACATGCTTGGCGGACCTTCTCTGAAAGTTGAGGTCCATTCCGGAGCCATAGCCGAGGCAATTTTGACGTTTTGCATTAGCTTGGCCGTCCTTCTAATCGTTCTCAGAGGCCCCCGCAGCCCGCTTCTCAAGGCCTGGTTACTGGCCATGTCCACTGTTACCTTGATCATCTCTGGATCTTCTTATACAGGACCTTCCATGAATCCTGCAAATGCGTTTGGGTGGGCGTATGTGAACAACAAGCACAATTCATGGGAGCACTTTTACGTCTACTGGATCAGCCCCTTTGCCGGTTCAGTTGCAGCTGCTTGGGTGTATCGGGCATTGTTTGCAGCTGCAGCAGCGCCGGTGAAACAGAAGAAAGCCTGA 726 53.17 MGAIKAAIADGVLTFMWIFCASSIGVLTAVVSSAVGVSGLPLPSIFITTVIIFLLVFFFNFVGSLLGGASFNPTGTTAFYAAGLGPDSLISMALRFPAQAAGAVGGALAIKEVMPEQYKHMLGGPSLKVEVHSGAIAEAILTFCISLAVLLIVLRGPRSPLLKAWLLAMSTVTLIISGSSYTGPSMNPANAFGWAYVNNKHNSWEHFYVYWISPFAGSVAAAWVYRALFAAAAAPVKQKKA 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13689407 13691516 + BLOR21248 Blo09g00333 64960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00333 241 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo09g00333 241 PRINTS Major intrinsic protein family signature 137 155 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo09g00333 241 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo09g00333 241 PRINTS Major intrinsic protein family signature 168 190 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo09g00333 241 PRINTS Major intrinsic protein family signature 91 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo09g00333 241 PRINTS Major intrinsic protein family signature 208 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo09g00333 241 Pfam Major intrinsic protein 4 225 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo09g00333 241 Gene3D Glycerol uptake facilitator protein. 2 240 IPR023271 -
Blo09g00333 241 PANTHER AQUAPORIN SIP1-1 1 240 - -
Blo09g00333 241 SUPERFAMILY Aquaporin-like 4 230 IPR023271 -
Blo09g00333 241 PANTHER AQUAPORIN SIP1-1 1 240 IPR044222 GO:0015250
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01418 Blo-Chr7:34178882 Blo09g00333 Blo-Chr9:13689407 2.50E-120 dispersed
Blo09g00333 Blo-Chr9:13689407 Blo04g00573 Blo-Chr4:4927713 3.87E-12 dispersed
Blo09g00333 Blo-Chr9:13689407 Blo09g00339 Blo-Chr9:13771718 9.02E-30 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00333 K09875 - vvi:100232979 308.916