Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00346 ATGGAGTTGTTACAGTCATTGGACGTTCAGACTCTTCTGGGTTTAGCTCTAGCTCTTCTCGCCATTGGAGCTGGAGCTCTCTATTTCCTTTCCTTTTCCAAGAAATCAACATCTAGAGGCTGCTTAGATCCTGAGAGATTCAAGGAGTTTAAACTTATCAAGCGCGCAAAGCTGAGCCATAATGTGGCAAAATTTACATTTGCTCTTCCAAAACCAACATCGGTTTTGGGTCTTCCCATTGGACAACACTTAAGTTGCAGAGGCAAGGACAGTCAAGGAGAAGAGGTTATTAAACCATATACTCCTACCACTTTGGACTCTGATGTAGGATATTTTGAACTGGTCATAAAAATGTATCCTCAAGGAAGAATGTCACACCATTTTAGAGAGATGCGAGTCGGGGATTATCTTTCTGTCAAGGGACCAAAGGGACGATTCAAGTATCGACCTGGTCAAGTTAGAGCATTTGGAATGCTTGCTGGTGGCTCTGGCATTACACCGATGTTCCAAGTTGCTCGTGCAATACTAGAGAACCCGGCCGACAAAACGAAGGTACACCTCATATATGCCAATGTTACATATGAAGATATTCTTTTGAAGGAAGAGATTGATTTGCTTGCCTCTAGATATCCAGATCGCTTCACGTTGTACTATGTCTTGAATCAGCCTCCCGAGAGTTGGGACGGAGGTGTCGGTTTCGTATCCAAGGAAATGATTCAAACCCACTGCCCTGCACCCGGACCTGATATTCAGACTGCAGACCAGTTGGTGACCTTGAATGTGTGTGGAGAAATAAGTTTCTTTTTTTTTTTCTCTCTCTCTGAAACGTTGATCGGGAGCACACCTATGATATACCTCAACAAAGTTACTGATGGCTGCGTGGCAAATGTTGCAGCAAAACTTGAATCGATGGAACCTTGCCGGAGTGTCAAGGATCGGATTGGTTATAGTATGATAGCTGATGCTGAGGAGAGTGGAGCAATATCCCCTGGAAAAACCATATTAGTCGAACCAACCACTGGAAATACAGGACTTGGTATTGCTTTCATTGCAGCAACTAAAGGTTACAAACTAATAGTAACCATGCCAGCATCCATCAATGTTGAAAGGAGGATCCTATTGCGAGCATTTGGTGCAGATATAATTTTGACTGATCCCGAGAAAGGTTTACAAGGGGCTATTGATAAAGCTGAAGAGATTGTTCATAACACTTCGAATGCTTACATGTTTCAACAGTTTGACAATGTTGCTAATACAAAGATCCACTTTGAAACAACGGGACCAGAGATATGGGAGGATACCATGGGCAATGTTGACATATTTGTTGCTGGGATTGGCACTGGTGGTACAATTACAGGCACTGGGCGATACTTGAACATGATGAACAAAGAAATTAAGATAGTGGGTGTTGAACCTGCAGAGAAAAGTGTAGTCTCAGGAGGAAGTCCAGGTTATGTGCCAAGCATTATGGATGTTAAATTGCTTGATGAGGTGATGAAGGTTACTAATGAAGAAGCTGTTGAAGTGGCCAGGAGATTAGCATTGGAGGAAGGATTACTGGTGGGTATTTCGTCAGGAGCTGCAGCCGCTGCTGCCATTAGTTTAGCAAGAAGACCTGAGAATGCTGGAAAACTTATTGTGGTAGTTGCGCAATCATTACATTGTCGTTTGATGGGTGGGGGTGATAGGCTGCCATGCTAA 1701 43.33 MELLQSLDVQTLLGLALALLAIGAGALYFLSFSKKSTSRGCLDPERFKEFKLIKRAKLSHNVAKFTFALPKPTSVLGLPIGQHLSCRGKDSQGEEVIKPYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMRVGDYLSVKGPKGRFKYRPGQVRAFGMLAGGSGITPMFQVARAILENPADKTKVHLIYANVTYEDILLKEEIDLLASRYPDRFTLYYVLNQPPESWDGGVGFVSKEMIQTHCPAPGPDIQTADQLVTLNVCGEISFFFFFSLSETLIGSTPMIYLNKVTDGCVANVAAKLESMEPCRSVKDRIGYSMIADAEESGAISPGKTILVEPTTGNTGLGIAFIAATKGYKLIVTMPASINVERRILLRAFGADIILTDPEKGLQGAIDKAEEIVHNTSNAYMFQQFDNVANTKIHFETTGPEIWEDTMGNVDIFVAGIGTGGTITGTGRYLNMMNKEIKIVGVEPAEKSVVSGGSPGYVPSIMDVKLLDEVMKVTNEEAVEVARRLALEEGLLVGISSGAAAAAAISLARRPENAGKLIVVVAQSLHCRLMGGGDRLPC 566
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13906357 13923469 - BLOR21261 Blo09g00346 64973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00346 566 CDD CBS_like 279 549 - -
Blo09g00346 566 CDD cyt_b5_reduct_like 50 263 - -
Blo09g00346 566 Pfam Oxidoreductase FAD-binding domain 50 148 IPR008333 -
Blo09g00346 566 Gene3D - 277 552 IPR036052 -
Blo09g00346 566 SUPERFAMILY Riboflavin synthase domain-like 42 150 IPR017938 -
Blo09g00346 566 TIGRFAM cysK: cysteine synthase A 275 556 IPR005859 GO:0004124|GO:0006535
Blo09g00346 566 Gene3D - 140 273 IPR039261 -
Blo09g00346 566 Gene3D Translation factors 40 139 - -
Blo09g00346 566 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 45 149 IPR017927 GO:0016491
Blo09g00346 566 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 300 318 IPR001216 GO:0006535
Blo09g00346 566 PANTHER CYSTATHIONINE BETA-SYNTHASE 276 553 - -
Blo09g00346 566 Pfam Oxidoreductase NAD-binding domain 158 264 IPR001433 GO:0016491
Blo09g00346 566 TIGRFAM cysKM: cysteine synthase 275 553 IPR005856 GO:0004124|GO:0006535
Blo09g00346 566 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 137 250 IPR039261 -
Blo09g00346 566 PANTHER S-SULFO-L-CYSTEINE SYNTHASE (O-ACETYL-L-SERINE-DEPENDENT), CHLOROPLASTIC 276 553 - -
Blo09g00346 566 Pfam Pyridoxal-phosphate dependent enzyme 276 549 IPR001926 -
Blo09g00346 566 Gene3D - 312 414 IPR036052 -
Blo09g00346 566 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 275 551 IPR036052 -
Blo09g00346 566 PRINTS Cytochrome B5 reductase signature 157 176 - -
Blo09g00346 566 PRINTS Cytochrome B5 reductase signature 76 87 - -
Blo09g00346 566 PRINTS Cytochrome B5 reductase signature 98 105 - -
Blo09g00346 566 PRINTS Cytochrome B5 reductase signature 134 148 - -
Blo09g00346 566 PRINTS Cytochrome B5 reductase signature 195 206 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00150 Blo-Chr8:1577237 Blo09g00346 Blo-Chr9:13906357 2.43E-132 dispersed
Blo09g00346 Blo-Chr9:13906357 Blo18g00581 Blo-Chr18:8546534 2.87E-116 dispersed
Blo16g00782 Blo-Chr16:32633650 Blo09g00346 Blo-Chr9:13906357 3.35E-17 dispersed
Blo18g00197 Blo-Chr18:1927631 Blo09g00346 Blo-Chr9:13906357 1.47E-36 dispersed
Blo07g01200 Blo-Chr7:31870643 Blo09g00346 Blo-Chr9:13906357 6.68E-138 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00346 K22846 - tcc:18599769 470.314