Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00348 ATGGAAAATCCTACCCAAGACCACCCAAACAGCCAGAGCCATGGCTCTGACAGGAATGAACCGGTTAGGTCAAGGTGGAACCCAAAGCCTGAGCAAATTCTTATTCTCGAGTCAATCTTCAACAGCGGAATGTCTAATCCTCCGAAAGAAGAAACAGTGAAAATCAGAAAGTTGCTCGAGAAATTCGGGTCTGTCGGCGATGCAAACGTCTTCTACTGGTTTCAAAACCGGCGGTCTAGGTCTCGCCGGAGGCAGAGGCAGATTCAGGCGAGTCTTGAGCAGAGAAATCAGGGTTTCAAAAGTGGGGGTGCAATTCAGACCGAAGCTTCTGCTTCATCTACCATGGAGTTTGGGTCTTCTTCCTCCTCGTTCTTTGGAGGCTCTTCTTCTTCTTATGGAGTTAGAAGAGATGATGGGTTTTCGAACAGTTTCCTTCCAGCTTCTCCTCAAATGGGTTTCCCTGAATTTGAGCAAAGCTTTTCTGTAACTCCTGGCTTTTGCCATTCCTCAGACTCTGCAAATTTTCATTTTCAACAAGGGTTGATAATGGTTTTCATCAATGGAGTTGCAACAGAAGTTCCAAATGGATCTTTTCATGTGAAATCAATGTTTGGAGAAGATGCAGTTTTGGTTCATTCTTCTGGAGTCCCACTTCCTGTCAACGACTTTGGATTTTTAGAGGACACTTTGCATAGCGGTGAAAGCTATTTTTTGGTAATTAACTTCCCCCTTTCATGCTTAATTACATATTAA 753 43.82 MENPTQDHPNSQSHGSDRNEPVRSRWNPKPEQILILESIFNSGMSNPPKEETVKIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQIQASLEQRNQGFKSGGAIQTEASASSTMEFGSSSSSFFGGSSSSYGVRRDDGFSNSFLPASPQMGFPEFEQSFSVTPGFCHSSDSANFHFQQGLIMVFINGVATEVPNGSFHVKSMFGEDAVLVHSSGVPLPVNDFGFLEDTLHSGESYFLVINFPLSCLITY 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13981045 13982753 - BLOR21263 Blo09g00348 64975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00348 250 Pfam Homeodomain 23 83 IPR001356 GO:0003677
Blo09g00348 250 Gene3D - 23 90 - -
Blo09g00348 250 MobiDBLite consensus disorder prediction 90 112 - -
Blo09g00348 250 MobiDBLite consensus disorder prediction 83 112 - -
Blo09g00348 250 PANTHER WUSCHEL-RELATED HOMEOBOX 11 2 241 IPR044558 GO:0003700|GO:0048830
Blo09g00348 250 PANTHER WUSCHEL-RELATED HOMEOBOX 11 2 241 - -
Blo09g00348 250 ProSiteProfiles 'Homeobox' domain profile. 19 84 IPR001356 GO:0003677
Blo09g00348 250 MobiDBLite consensus disorder prediction 1 17 - -
Blo09g00348 250 MobiDBLite consensus disorder prediction 1 28 - -
Blo09g00348 250 SUPERFAMILY Homeodomain-like 19 89 IPR009057 -
Blo09g00348 250 SMART HOX_1 21 88 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo07g01201 Blo09g00348 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00348 Blo-Chr9:13981045 Blo14g00416 Blo-Chr14:4650611 4.42E-12 dispersed
Blo07g01201 Blo-Chr7:31895914 Blo09g00348 Blo-Chr9:13981045 1.00E-133 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12773 PF00046 Homeodomain 9.20E-14 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00348 - - tcc:18599775 276.174