Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00352 ATGGCTGACCAGTTCCGGTCCCATTCCAAGTCCGCCGATTCCCGCAGGAAAATCATCGGGAAACAGGCTGCGACCAACTTCGAGAGAGAGGGCGAGGCCGAGTCGCCGGCCGGTATGCTGCTGGCGCCATCTCCTGTGACCCCATGTGGGGCATGCAAATTCTTGAGGAGAAAGTGCATTAGTGGCTGCATTTTTGCGCCCTACTTTAGCTCCGACCAAGGCTCAGCCAGGTTCGCCGCCGTCCACAAAGTGTTCGGCGCCAGCAATGTTTCGAAGCTTCTGCTTCATATTCCGGTGAGCCGGCGGCACGACGCCGTCGTTACTATCTCTTACGAGGCTCAGGCGAGACTTTCCGACCCCGTTTATGGCTGCGTTTCTACCATACTCGCTTTACAACAGCAGGTGTCTGCACTTCAGGCGGAGCTAGCGATGGTTCAAGCGCAGCTAATAAACAGCAGAATCGCCTTGGCAACAGCCGTCCAGAGCTCCCATGCACAGCAACAGCAAAATAACATCGAAGAAATGATTAACAACGTTCAACTCCCGGCTTACTCAAACAACTCATGTGCTTCCACCAATTTGATCAACAATCTGGCCGCCTTCACCTCCCCACCGTTCGACCTTCCGGCGAACGACCGTACGACTCCGTTGTCTTCTCACAGCTGCTTAGACCCTCTGCAACTTTCTCAGCCCAATTTCCATGAGGATCAGGAGGATGACGAGGAAGAGATTAGATTTCCCACCCTCCATTTTAACCTTTGA 762 53.81 MADQFRSHSKSADSRRKIIGKQAATNFEREGEAESPAGMLLAPSPVTPCGACKFLRRKCISGCIFAPYFSSDQGSARFAAVHKVFGASNVSKLLLHIPVSRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVSALQAELAMVQAQLINSRIALATAVQSSHAQQQQNNIEEMINNVQLPAYSNNSCASTNLINNLAAFTSPPFDLPANDRTTPLSSHSCLDPLQLSQPNFHEDQEDDEEEIRFPTLHFNL 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14137338 14138204 - BLOR21267 Blo09g00352 64979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00352 253 ProSiteProfiles LOB domain profile. 47 149 IPR004883 -
Blo09g00352 253 Pfam Lateral organ boundaries (LOB) domain 48 146 IPR004883 -
Blo09g00352 253 Coils Coil 128 148 - -
Blo09g00352 253 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 241 - -
Blo09g00352 253 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 10 241 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo09g00352 Blo12g00549 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00132 Blo-Chr1:1819924 Blo09g00352 Blo-Chr9:14137338 3.68E-53 dispersed
Blo09g00352 Blo-Chr9:14137338 Blo15g00606 Blo-Chr15:14709666 1.05E-37 dispersed
Blo09g00352 Blo-Chr9:14137338 Blo12g00316 Blo-Chr12:18573057 1.47E-54 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12774 PF03195 LOB 9.50E-38 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00352 - - vri:117921175 264.618