Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo09g00352 | ATGGCTGACCAGTTCCGGTCCCATTCCAAGTCCGCCGATTCCCGCAGGAAAATCATCGGGAAACAGGCTGCGACCAACTTCGAGAGAGAGGGCGAGGCCGAGTCGCCGGCCGGTATGCTGCTGGCGCCATCTCCTGTGACCCCATGTGGGGCATGCAAATTCTTGAGGAGAAAGTGCATTAGTGGCTGCATTTTTGCGCCCTACTTTAGCTCCGACCAAGGCTCAGCCAGGTTCGCCGCCGTCCACAAAGTGTTCGGCGCCAGCAATGTTTCGAAGCTTCTGCTTCATATTCCGGTGAGCCGGCGGCACGACGCCGTCGTTACTATCTCTTACGAGGCTCAGGCGAGACTTTCCGACCCCGTTTATGGCTGCGTTTCTACCATACTCGCTTTACAACAGCAGGTGTCTGCACTTCAGGCGGAGCTAGCGATGGTTCAAGCGCAGCTAATAAACAGCAGAATCGCCTTGGCAACAGCCGTCCAGAGCTCCCATGCACAGCAACAGCAAAATAACATCGAAGAAATGATTAACAACGTTCAACTCCCGGCTTACTCAAACAACTCATGTGCTTCCACCAATTTGATCAACAATCTGGCCGCCTTCACCTCCCCACCGTTCGACCTTCCGGCGAACGACCGTACGACTCCGTTGTCTTCTCACAGCTGCTTAGACCCTCTGCAACTTTCTCAGCCCAATTTCCATGAGGATCAGGAGGATGACGAGGAAGAGATTAGATTTCCCACCCTCCATTTTAACCTTTGA | 762 | 53.81 | MADQFRSHSKSADSRRKIIGKQAATNFEREGEAESPAGMLLAPSPVTPCGACKFLRRKCISGCIFAPYFSSDQGSARFAAVHKVFGASNVSKLLLHIPVSRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVSALQAELAMVQAQLINSRIALATAVQSSHAQQQQNNIEEMINNVQLPAYSNNSCASTNLINNLAAFTSPPFDLPANDRTTPLSSHSCLDPLQLSQPNFHEDQEDDEEEIRFPTLHFNL | 253 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 14137338 | 14138204 | - | BLOR21267 | Blo09g00352 | 64979 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo09g00352 | 253 | ProSiteProfiles | LOB domain profile. | 47 | 149 | IPR004883 | - | |
Blo09g00352 | 253 | Pfam | Lateral organ boundaries (LOB) domain | 48 | 146 | IPR004883 | - | |
Blo09g00352 | 253 | Coils | Coil | 128 | 148 | - | - | |
Blo09g00352 | 253 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 10 | 241 | - | - | |
Blo09g00352 | 253 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 20 | 10 | 241 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo09g00352 | Blo12g00549 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g00132 | Blo-Chr1:1819924 | Blo09g00352 | Blo-Chr9:14137338 | 3.68E-53 | dispersed | |
Blo09g00352 | Blo-Chr9:14137338 | Blo15g00606 | Blo-Chr15:14709666 | 1.05E-37 | dispersed | |
Blo09g00352 | Blo-Chr9:14137338 | Blo12g00316 | Blo-Chr12:18573057 | 1.47E-54 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12774 | PF03195 | LOB | 9.50E-38 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo09g00352 | - | - | vri:117921175 | 264.618 |