Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00355 ATGGGAAAGGCCGAGGAAGAGCAGCCCCTCCCTTTGAGCTCCGTGCCGACGAACCAGAATGTGGGTGGCCGATGCGGTTATGGGTGCAGTAGAATTCGGAGGCTCATTAGGGTCAGATGCGTCGTCGTTCTAGTTCTGTCGGCAGCTGTTTTTCTTTCTGCCATATTTTGGTTGCATCCGTTCTTTCATAACTCAGATCAGAAGGATCTGGATCTTGATTCCGAGTTCAAAGATCATAACATTGTAGCAAGTTTTAATGTTGAGAAGCCAGTTTCATTTCTTGAAGACCATGTCTTGCAGCTTGAGAATGACATTTTTGAAGAAATATATGTACCTTCAGCCAAGGTCGGTATCTTATCTATGGAACCGTTGGCTGGATCAAACGAAACGAAAGTTGTATTTGCTGTCGACCCGGAAAGAAGTTCTTCAGAAATACCCGAAATGTCTTTGAGTTTGATCAGAGCGTCTTTTGAAATTTTGGTTATTAATCATCCTCCTCTTCGACTCAGTACGGCCTTGTTTGGAGAGCCTGTTTTCTTTCAGGTGCTGAAATTCAACGGAGGAATTACGATAAGTCCGCCGCAGAGTGCGTTTCTTTTGCAGAAGGTGCAAATCTATTTCAACTTCACGTTAAACTTTTCCGTCTATCAAATTCAGTTGAAGTTCGATGAACTTAGAAGCCAGCTGAAGTCGGGACTAAATCTGGCTCCTTATGAGAACATGTATATTAGCTTATCGAACTCGAGAGGTTCGACTGTCCATGCACCGACCATCGTCCAGTCGTCCGTTCTCTTGGCAGTCAGGAATACTCCATCGACACGAAGACTAAAGCAGTTGGCTCAAACCATCACGGGTTCTCAACCAAAAAACCTTGGCCTGAATAACACTGTATTTGGGAAGGTAAAGGAAGTCCGCCTTTCATCGATTCTTAGGCACTCTCTCACTGGCGGTAGTGGAAGCAGCCCCACTCCGTCACCTTCGCCCACTCCCGGTCCCAGGGCCCATCGCCACCATCACCATCGCCACCATCATCACCATCACGATCATGGTGGAGATCTGGCTCCTGCTACTTCTCCTTCTCCTTCAACTGAGAGGGGTCCACCTGGCAACCAGATAAGCGTGTCTCCTCCCGAAGACAGCGCACTAGCCCCTCGGATAAGCTCTCTTCCGCCTGAGAGAAGTTACGAAGGAAAGCCACCGAGCTGCCAAGACCATTGTAAGAGATCTTCACAAAAGGGGAGAAAACCAGTTGATTTAGCTCCGGCTCCTTTGCTAAATATTTCTCCTCGTTGTCCGCCAGCTTCCCCGCAGGTTTATACAAACCCATCAGCACCATCTCCTTCGATTCTGGCATCTAGTCCACTCCCAAATGTAGTTTATGCTCATCTTCAACCTCCATCTACAAGTGATCACGTAAGAGAAACTGCTGACACAGCGCCATCAGTTGCACCATCGCCATCTTTATTGTATCGCGACATGGCGATTAGTATAGTCGACCGTGATCTTGGCTTCGACGATTACAGTATCTACGATGTCTACTTCGACAACGATCGTATTGAAACCCTACTCACCTCTTCTCCTTCCATGGTTGACTCTTGGATCGACGATATCTGTCGCATTCATCGACGCCGACTCCACTGCCTCATTGTCGGCCTTGACGTCGAATGGCGCCCTAACAACCGCCATTACGATAATCCAGTCGCCACGCTCCAGCTCTGCGTCGGCCGCCGCTGCATCATATTTCAGCTTCTCTACGCCTCTGGAATTCCGGATTCTCTGATTCACTTTCTGGAGGACGAGGACTTTACTTTTGTCGGGGTCGGAATTCAAAACGATGTGGAAAAGCTTATGGAAGATCATGATTTGAATGTGGCAAATACTGTTGATCTTCGGTCCTTGGCTGCGGTAAGACTGAATCGACCTGATTTGACAAATGCGGGGATTAAGACTCTGGTTCGCGAGATTCTGGGTAAGGATATCAACAAACCAAGGAGTGTGACTATGAGCCGGTGGGATAGTGAATGCCTTACTTACGCTCAGGTACAGTATGCTTGTGTTGATGCTTTTGTGTCTTTTGAGGTCGGCAGGTGCTTGAATGCAGCAGATTAA 2109 47.75 MGKAEEEQPLPLSSVPTNQNVGGRCGYGCSRIRRLIRVRCVVVLVLSAAVFLSAIFWLHPFFHNSDQKDLDLDSEFKDHNIVASFNVEKPVSFLEDHVLQLENDIFEEIYVPSAKVGILSMEPLAGSNETKVVFAVDPERSSSEIPEMSLSLIRASFEILVINHPPLRLSTALFGEPVFFQVLKFNGGITISPPQSAFLLQKVQIYFNFTLNFSVYQIQLKFDELRSQLKSGLNLAPYENMYISLSNSRGSTVHAPTIVQSSVLLAVRNTPSTRRLKQLAQTITGSQPKNLGLNNTVFGKVKEVRLSSILRHSLTGGSGSSPTPSPSPTPGPRAHRHHHHRHHHHHHDHGGDLAPATSPSPSTERGPPGNQISVSPPEDSALAPRISSLPPERSYEGKPPSCQDHCKRSSQKGRKPVDLAPAPLLNISPRCPPASPQVYTNPSAPSPSILASSPLPNVVYAHLQPPSTSDHVRETADTAPSVAPSPSLLYRDMAISIVDRDLGFDDYSIYDVYFDNDRIETLLTSSPSMVDSWIDDICRIHRRRLHCLIVGLDVEWRPNNRHYDNPVATLQLCVGRRCIIFQLLYASGIPDSLIHFLEDEDFTFVGVGIQNDVEKLMEDHDLNVANTVDLRSLAAVRLNRPDLTNAGIKTLVREILGKDINKPRSVTMSRWDSECLTYAQVQYACVDAFVSFEVGRCLNAAD 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14198685 14206457 + BLOR21270 Blo09g00355 64982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00355 702 SMART 35exoneu6 519 702 IPR002562 GO:0003676|GO:0006139|GO:0008408
Blo09g00355 702 MobiDBLite consensus disorder prediction 312 443 - -
Blo09g00355 702 SUPERFAMILY Ribonuclease H-like 532 698 IPR012337 -
Blo09g00355 702 MobiDBLite consensus disorder prediction 398 414 - -
Blo09g00355 702 CDD WRN_exo 524 700 - -
Blo09g00355 702 Gene3D - 509 699 IPR036397 GO:0003676
Blo09g00355 702 PANTHER F20B24.21 1 492 - -
Blo09g00355 702 Pfam 3'-5' exonuclease 548 694 IPR002562 GO:0003676|GO:0006139|GO:0008408
Blo09g00355 702 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 492 - -
Blo09g00355 702 MobiDBLite consensus disorder prediction 356 377 - -
Blo09g00355 702 MobiDBLite consensus disorder prediction 332 348 - -
Blo09g00355 702 MobiDBLite consensus disorder prediction 426 440 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00096 Blo-Chr10:974529 Blo09g00355 Blo-Chr9:14198685 1.44E-12 transposed
Blo11g00108 Blo-Chr11:833914 Blo09g00355 Blo-Chr9:14198685 3.30E-128 transposed
Blo16g00667 Blo-Chr16:26200175 Blo09g00355 Blo-Chr9:14198685 8.67E-21 transposed
Blo07g01208 Blo-Chr7:32039023 Blo09g00355 Blo-Chr9:14198685 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00355 - - jre:109008135 486.878