Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00358 ATGGATTCCTCGTCAGCTTGCAAAGATGGGAGCCCAAAAGGGTTGAAAGATAAAGAATCCATGGTTGATTCCTTCTTGGTTGAAGCTCTTCAAAATCCTCGCCATCGTCTGACAATTTTGCGGATGGAATTAGATATCCGCAAGTTTTTAAGCAATCCTTCTCAGCACCTGTTTGAATTCCCACATTTCCCAACTTCATACCTAAGACTTGCAGCTCACCGTGTTGCTCAACATTACGGTCTGCAAACGATGGTTCAGGAAACTGGTACAGAAAGGCAGGGAAATAAGATTTTGGTCTGGAAAACGGCCGAAGGAAGATACCCTTCAGTCCTCTTATCTGAAATACCTGCTCAACAGTCAGAAAATGCCAGGCATGAGCACAAAAAAATTGCCATCAAGCCTAGGCCTAAGAAAACTGAAAATGAAGCAAATGATAGTGGGGTGAAGAAAAGTCATGTTAGAAGTGTGGAAGAGCGGATGGAGGAGTATGACAGGGCACGGGCTCGGATTTTCAGCACTCCTAATGGATTTGACGAAGATGATATACAACCTCAATCTTCCAAAGATGGAAAAAATGTGTGCTTTCCAGTGGTTGAGTTCGAAGGAAAAATGATTTCTGCAAATGATCCTGCGAAATGCATTGGTGTAAAGGATTCTGCTTCAACTTGCCAAGTTGCCATTTTCAGAGATACGGCGAAGGATCGTTTTGACCCAGATTACGATCGCAGCTCCGAAAGGTATACTAGAAATCTCTCAGCCAATCAAAGCAAGAATTTCTGCCCTTTTAGTGTCCAAAATATCCAGTCTCCAATTTTCCAGTATGATCCTGGTTTTTCTTCCTTGTCGCGCATGCCAAGTAGTCAAGCTTCGGTTGGCTATTTGCCACCTCCCAATGCTGTTATCAGCCACCCTTACTATGAAGCAGGATTGAATCAGGCAATGGATGCAGCAGCTTATTTGCAGTGGCAGAGTGCAGCAATGATGTATGCGCAGTCTTATGACCAGTTGAGACACCCTTTTTTCCAGACCTGGCCTGACCTGGGTCACAATTTAACAAACCAGGCAGGTCTGGGCTGGTCCAATGATGAGCTTGAGAAGGTAGCTCAAAGTCGTGAGTATGGCTCCATGCAGCCAGCAACAGCCACTGAGCTTCGAGTATTCGCAAAACAATTAGCAGTACAGCTAGAAAAACAGGAGCTTGTTGATTATGCAACTATGCCTTCAAAGTCTAAGAAGTCTTCAAAAGCACAATCCAGATTATCAATCTCGGACCAGATTCAATCTCCCCGGCCATCCCAGGCAAACCCAACTATAAATCCAGAAATTGAGGATGATGATTTGGTGTCTTATCTTGAAGAGGCTTCTAGTAAATTTCCTTCATTGATCGGAAAGTCAGCATTCATAGGCCGGGTGATTGATGTGGAAGATGAGTTCAAAGGCTGTAAGATTTGGCTCTCAGAGTCTTCCATGGTTGCTTCTTCTCTTGTTCCCGGGGCTATTGTTTCGGTTTCGCTCATTGCACAAAGGGCAAATTTTTCAAATGGATTTCCTCTTTCATCATTAGGAGATGAAAGTGTTGGATCTTTCGGGGTTGGTACTCCAGATAGGTTGGCTAATGAGCCAGGAAACTACTTTGCACTTGCGACCATTTATCCTTCTATCAAGGTTTTGAAGGATGGAGTGCGATTGTCTTCAAACCTTTCACATACCTTGGGATGCCCAACATCTGGCAGGAATTTGTTTGTATACCCTTTACGAAATCAATTAAACTCTGGTATGGTAAATGGGGGGAAGAAACAAAATGGCAATGAGGTTGACTTTTTTCGAACATACAACTGCAAGGAATTGTATCTAGAGTTTGTTGCTTCTAATAGTAAACAAACGTTGAACAATAATATTCTGTCTTCTAATAACTTCCATCTAGAAAAATCTTATGGTGAAAATGAAAATGAAAATGTTACATCACCTATGACTCCATTGCATCAGTCAAAGCTTAGCTTGCCTACTACTAGAAAATTAATTTCACCAGTAAGTGAAGAATCAATATCAAATCAGAAAATTTCATCTTCTGATCAATCTCGTATTAAGGAGATACTAGAGGATAAGACTGCCAAAAAGATTCTGCAAACTTGTGCTAGCTCATGGTTACATTCTCGATGTTTACTTCGGGGAAATCTTATAATCATACCAGTGCTTTCAGAGCTTTGCACTTTCCGTGTCGTTGGTGCTACAGAGTTGTCATCAGATGATGCCAATTGCGATCTGAATGACAGAAGTCATAATTATATACATGAAGCTCCCGAGTTACAAGAGCTTGGAAATTATGCTTTTACTATAAGTAATCGAACAAGAGTATCATTCCACGTCTTGTCATCAACTAGAGTGCCTACATCGATGCCAAATGGAAGTTCAACTAGTGTAGACCTTGGAAGTAAAGATCTTAAAGTCAAAGGAGAAATTTCAAAATTAGGTGGACTTTCCAAAGAATATTCAGTTTTAAAGGATATCATAGCTGCGGCATATGCAAACACACTGTCTAGTTTTGGTTTACGAACTACAAAGGGAGTACTGCTTCATGGTCCACCTGGTACTGGAAAAACTTCTCTTGCTAGATTATGTGCTTATGACGCTGGTGTCAATTTTTTCTCTTTGAATGGACCTGAAATTATTAGTCAATATTATGGAGAAAGTGAACAAGCACTGAATGAGGTTTTTGAATCTGCCATGCGAGCTGCACCTTCTTTGGTGTTTATTGACGAGTTAGATGCTATTGCGCCTGCAAGAAAAGATGGAGTTGAAGCTCTTTCTCAAAGATTAGTTGCTACATTATTGAATTTGATGGATGGGATTGACAAAACTGATGGGTTTATTGTGATTGCTGCTACTAATAGGCCTGATAGTATTGAGCCTGCACTCAGACGACCTGGTAGATTTGACAGAGAAATTGAAATAGGAGTGCCATCCCCTAAGCAAAGATTGGATATATTGCTTACTCTTCTCAGTGAAATGCAACATTCACTTCTTGACTCACAAGTTGAGCATCTTGCTATGGTTACACATGGCTTTGTTGGTGCTGATCTGGCTGCCCTTTGCAATGAGGCAGCTTTGGTTTGTCTGAGGCGCTTTGATAAGTCCAAGCATTCTGGTAATGATTTCTGTTGTGGTAAAACCGCTGCTTGTGGAGGCTATTGGGATAATATAATCAAAGAGCCTGACAACTTAAAGGATGTAAGAGACAACTCATTGAATAGTTCAGTTGCTGGATCTTCATCTTCCTTATGTACAATTATTCCATATGATACACCAACATCTGTTTCCCCTCTGACTCATCTTGTAGCCGATACTGGCTGTAGGACGAAAGAAAGATGTACATTAATAATGACTTTTGAAGACTTTGAGAAGGCCAGAATGAAAGTGAGACCAAGTGCCATGCGAGAGGTCATAATTGAGGTTCCAAAAGTTAAATGGGAAGATGTGGGTGGCCAAAGGGAGGTAAAGAGACAATTGATGGAAGCAGTAGAATGGCCACAAAAACATCAAGATGCATTTGAACGTATTGGTACTCGACCTCCGACAGGAGTCTTGTTATTTGGCCCTCCTGGTTGCAGCAAAACTCTGATGGCACGAGCTGTAGCTTCTGAAGCAGGGCTGAATTTCCTTGCCGTTAAGGGTCCAGAGCTTTTCAGCAAGTGGGTTGGTGAGTCTGAAAAGGCTGTAAGATCCCTGTTTGCGAAGGCTCGGGCAAATGCACCCTCAATCATATTTTTTGATGAAATAGATGGTTTAGCTGTCATTCGTGGAAAGGAAAGTGAGGGTGTCTCAGTTTCCGATAGAGTTATCAGTCAACTTCTTGTTGAAATGGACGGTTTGCACCAAAGAGTTAATGTTACTGTGATTGCTGCTACCAATCGGCCTGATAAGATTGATCCAGCTCTTTTAAGACCAGGACGCTTTGACCGGTTGCTGTATGTTGGGCCTCCAAACAATATTGATCGAGAAGAGATATTCCGCATTCATTTGCGCAAAATTCCTTGCAGCTCTGATGTCAATGTAGTAGAGCTTGCTGATCTCACCAAAGGCTGCACTGGGGCTGACATATCATTAATCTGCCGCGAGGCAGCTCTAGCTGCGTTAGAGGAGAGCCTGGAGGCTTCAGAAATAACAATGCAACAGTTGAAGACTGCAATTAAACTTGTAAAGCCAACAGAAACTGATCCCTACGAAGAATTTTCTACCAAGTTTCAAAGGCTTGTCGTCTCTAATGATACGGGATCTGAAGGCGGACATGAGCAATGTGCAGCACAATCTAGCTGGTTTTCTTTCTGGTGA 4329 41.97 MDSSSACKDGSPKGLKDKESMVDSFLVEALQNPRHRLTILRMELDIRKFLSNPSQHLFEFPHFPTSYLRLAAHRVAQHYGLQTMVQETGTERQGNKILVWKTAEGRYPSVLLSEIPAQQSENARHEHKKIAIKPRPKKTENEANDSGVKKSHVRSVEERMEEYDRARARIFSTPNGFDEDDIQPQSSKDGKNVCFPVVEFEGKMISANDPAKCIGVKDSASTCQVAIFRDTAKDRFDPDYDRSSERYTRNLSANQSKNFCPFSVQNIQSPIFQYDPGFSSLSRMPSSQASVGYLPPPNAVISHPYYEAGLNQAMDAAAYLQWQSAAMMYAQSYDQLRHPFFQTWPDLGHNLTNQAGLGWSNDELEKVAQSREYGSMQPATATELRVFAKQLAVQLEKQELVDYATMPSKSKKSSKAQSRLSISDQIQSPRPSQANPTINPEIEDDDLVSYLEEASSKFPSLIGKSAFIGRVIDVEDEFKGCKIWLSESSMVASSLVPGAIVSVSLIAQRANFSNGFPLSSLGDESVGSFGVGTPDRLANEPGNYFALATIYPSIKVLKDGVRLSSNLSHTLGCPTSGRNLFVYPLRNQLNSGMVNGGKKQNGNEVDFFRTYNCKELYLEFVASNSKQTLNNNILSSNNFHLEKSYGENENENVTSPMTPLHQSKLSLPTTRKLISPVSEESISNQKISSSDQSRIKEILEDKTAKKILQTCASSWLHSRCLLRGNLIIIPVLSELCTFRVVGATELSSDDANCDLNDRSHNYIHEAPELQELGNYAFTISNRTRVSFHVLSSTRVPTSMPNGSSTSVDLGSKDLKVKGEISKLGGLSKEYSVLKDIIAAAYANTLSSFGLRTTKGVLLHGPPGTGKTSLARLCAYDAGVNFFSLNGPEIISQYYGESEQALNEVFESAMRAAPSLVFIDELDAIAPARKDGVEALSQRLVATLLNLMDGIDKTDGFIVIAATNRPDSIEPALRRPGRFDREIEIGVPSPKQRLDILLTLLSEMQHSLLDSQVEHLAMVTHGFVGADLAALCNEAALVCLRRFDKSKHSGNDFCCGKTAACGGYWDNIIKEPDNLKDVRDNSLNSSVAGSSSSLCTIIPYDTPTSVSPLTHLVADTGCRTKERCTLIMTFEDFEKARMKVRPSAMREVIIEVPKVKWEDVGGQREVKRQLMEAVEWPQKHQDAFERIGTRPPTGVLLFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAVIRGKESEGVSVSDRVISQLLVEMDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNNIDREEIFRIHLRKIPCSSDVNVVELADLTKGCTGADISLICREAALAALEESLEASEITMQQLKTAIKLVKPTETDPYEEFSTKFQRLVVSNDTGSEGGHEQCAAQSSWFSFW 1442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14263669 14278068 + BLOR21273 Blo09g00358 64985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00358 1442 MobiDBLite consensus disorder prediction 120 158 - -
Blo09g00358 1442 CDD AAA 1160 1326 - -
Blo09g00358 1442 SUPERFAMILY R3H domain 10 135 IPR036867 GO:0003676
Blo09g00358 1442 Pfam SUZ domain 127 173 IPR024771 -
Blo09g00358 1442 ProSiteProfiles R3H domain profile. 36 103 IPR001374 GO:0003676
Blo09g00358 1442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 821 1042 IPR027417 -
Blo09g00358 1442 CDD AAA 850 985 - -
Blo09g00358 1442 PANTHER - 446 1424 - -
Blo09g00358 1442 Pfam AAA+ lid domain 1348 1393 IPR041569 -
Blo09g00358 1442 Pfam AAA+ lid domain 1011 1042 IPR041569 -
Blo09g00358 1442 MobiDBLite consensus disorder prediction 119 158 - -
Blo09g00358 1442 Pfam R3H domain 38 92 IPR001374 GO:0003676
Blo09g00358 1442 PANTHER AAA-FAMILY ATPASE 446 1424 - -
Blo09g00358 1442 Gene3D - 986 1083 - -
Blo09g00358 1442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1152 1408 IPR027417 -
Blo09g00358 1442 ProSitePatterns AAA-protein family signature. 1296 1314 IPR003960 GO:0005524|GO:0016887
Blo09g00358 1442 Gene3D - 804 985 IPR027417 -
Blo09g00358 1442 MobiDBLite consensus disorder prediction 406 440 - -
Blo09g00358 1442 Pfam ATPase family associated with various cellular activities (AAA) 856 985 IPR003959 GO:0005524|GO:0016887
Blo09g00358 1442 Pfam ATPase family associated with various cellular activities (AAA) 1194 1325 IPR003959 GO:0005524|GO:0016887
Blo09g00358 1442 MobiDBLite consensus disorder prediction 407 439 - -
Blo09g00358 1442 Gene3D - 1151 1326 IPR027417 -
Blo09g00358 1442 SMART AAA_5 1190 1328 IPR003593 -
Blo09g00358 1442 SMART AAA_5 852 988 IPR003593 -
Blo09g00358 1442 CDD R3H_encore_like 35 102 - -
Blo09g00358 1442 Coils Coil 1375 1395 - -
Blo09g00358 1442 SMART R3H_4 20 102 IPR001374 GO:0003676
Blo09g00358 1442 Gene3D - 12 135 IPR036867 GO:0003676
Blo09g00358 1442 Gene3D - 1327 1394 - -
Blo09g00358 1442 ProSiteProfiles SUZ domain profile. 106 175 IPR024771 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00041 Blo-Chr4:358409 Blo09g00358 Blo-Chr9:14263669 1.28E-46 dispersed
Blo09g00358 Blo-Chr9:14263669 Blo12g00479 Blo-Chr12:22420429 3.06E-60 dispersed
Blo16g00233 Blo-Chr16:5207309 Blo09g00358 Blo-Chr9:14263669 4.15E-12 dispersed
Blo11g00115 Blo-Chr11:866944 Blo09g00358 Blo-Chr9:14263669 7.06E-100 transposed
Blo07g01214 Blo-Chr7:32118628 Blo09g00358 Blo-Chr9:14263669 4.39E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00358 - - jre:108983412 1216.45