Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00375 ATGGGTCTAGCTGCTGAATCTCAGTTTCATGTTTTGGCCGTTGATGATTGTCTTATTGATAGAAAACTGATAGAAAGGCTGCTCAAGACCTCGTCGTATCATGTCACCACGGTTGATTCTGGTTCTAAAGCTTTGGAATTTCTGGGTTTTAATCAAGATGATAAAACCAACGCAATTATTCCTTCGATTTCATCACATAAGGAAGTGGAAGTGAATCTTATCATCACAGATTACTGTATGCCGGGGATGACAGGCTACGATTTGCTCAAGAAAATCAAGGAATCTTCATCCTTGAGAAACATACCGGTAGTGATAATGTCGTCGGAGAATGTACCTTCAAGAATCACCAGATGCTTGGAGGAAGGAGCAGAAGAATTTTTCTTGAAACCAGTTAGACTCTCAGACATGAACAGGCTGAAACCCCACATGATGAAAACCAGATCGAAGGATCAAGAACAAGAAAATGGCGATGAATCAGAGATGAACTGTCAATTTCTAGAACAAAAACAGGCGAGTTTAATCTTCGGTGGCCATGGAGGAGGGATCCTTGCGAATTGGTGCGATCTTGTGGCTGTGACTTCCATTGTCGATCGTTTATTGCTTCAAAACCTGGTACAAAACCTCATAAAACGATGCCTTCATCTGTACATGAGCCCACAGGAAGTTTTCGAAACACTACTGAATCAAGAGCAGATTGAGCCTGCTTTTACAGAACTTGTTTGGCAAAAGCTTGAAGATGAAAATCGGGAATTTTTTGATGCATATTATTTGAGATTGATGGTGAAGGATCAAATTATGGAATTCAACAGGTTGCTTGAGCAACAGGTGAGAATGACGCACCAGATCAATCAATCTGGAATAACTGCACTACCTACCTCTAATGGATCTCAAATTCGACCAATGCAGCAGAACTCAGCATACACAGGGCTCCCTGTAAAACAAGAAACTCTGCTCTATCGGATTGATGCCAGCTCCATTCCATTTATTAAGGGCGGATCATCGTTCAATTCAATGCATACTGCAGCAGATATGCCTGCTCATGCAACTAGAATTGATGCACTACCAAATATGATTTTGCCTCAAAATTCAGACGTAGGTATAATACAAGGAATAAATGGAGGGACAGTGAAATTGGAAGCTGAATATTCTGGCAGTTCTCAAAATATGTTTGTTGTGGATGACAATTTGATGGAAGAACGACCAACCATTGGGGATGCCTCGGTTGCCCATTTTACAAATGTGATGCCTAACACGCAAACCTTAAATGAACCACTTCTAGATCCAGACATTTTTTCATTAGGATTTCTTAGTCAGATTCCTCAGACTTTCAATCTCTCAGACTTGACTGTTGACTTCACGCAGATTTCAGATATACTAGACAGCTTTGCTAGATCTCCCTTCATGGCATCGGGGGCTGATAATTTTCTGGTGAATCAAGAAAGAGAAACCCATGGGGATAGTAAAGGGTTGGAAAGTATATCAGAAGGCCTAAGCTATGATGATTTTGTGAGCGAATAG 1518 40.91 MGLAAESQFHVLAVDDCLIDRKLIERLLKTSSYHVTTVDSGSKALEFLGFNQDDKTNAIIPSISSHKEVEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKPVRLSDMNRLKPHMMKTRSKDQEQENGDESEMNCQFLEQKQASLIFGGHGGGILANWCDLVAVTSIVDRLLLQNLVQNLIKRCLHLYMSPQEVFETLLNQEQIEPAFTELVWQKLEDENREFFDAYYLRLMVKDQIMEFNRLLEQQVRMTHQINQSGITALPTSNGSQIRPMQQNSAYTGLPVKQETLLYRIDASSIPFIKGGSSFNSMHTAADMPAHATRIDALPNMILPQNSDVGIIQGINGGTVKLEAEYSGSSQNMFVVDDNLMEERPTIGDASVAHFTNVMPNTQTLNEPLLDPDIFSLGFLSQIPQTFNLSDLTVDFTQISDILDSFARSPFMASGADNFLVNQERETHGDSKGLESISEGLSYDDFVSE 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14523871 14533380 + BLOR21290 Blo09g00375 65002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00375 505 CDD REC_typeA_ARR 11 139 - -
Blo09g00375 505 PANTHER - 203 504 - -
Blo09g00375 505 SUPERFAMILY CheY-like 8 144 IPR011006 -
Blo09g00375 505 Pfam Plant protein 1589 of unknown function (A_thal_3526) 205 256 IPR006476 -
Blo09g00375 505 ProSiteProfiles Response regulatory domain profile. 10 144 IPR001789 GO:0000160
Blo09g00375 505 Pfam Response regulator receiver domain 11 136 IPR001789 GO:0000160
Blo09g00375 505 SMART REC_2 9 143 IPR001789 GO:0000160
Blo09g00375 505 Gene3D - 10 245 - -
Blo09g00375 505 PANTHER OS02G0137100 PROTEIN 203 504 IPR006476 -
Blo09g00375 505 Coils Coil 149 169 - -
Blo09g00375 505 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 203 258 IPR006476 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo09g00375 Blo12g00563 CCT
Blo07g01228 Blo09g00375 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00375 Blo-Chr9:14523871 Blo11g00883 Blo-Chr11:17329986 1.66E-51 dispersed
Blo16g00468 Blo-Chr16:18661330 Blo09g00375 Blo-Chr9:14523871 4.77E-16 dispersed
Blo01g01297 Blo-Chr1:49779173 Blo09g00375 Blo-Chr9:14523871 1.99E-45 transposed
Blo04g00405 Blo-Chr4:3304206 Blo09g00375 Blo-Chr9:14523871 6.20E-47 transposed
Blo12g00563 Blo-Chr12:23828298 Blo09g00375 Blo-Chr9:14523871 8.43E-37 transposed
Blo07g01228 Blo-Chr7:32326536 Blo09g00375 Blo-Chr9:14523871 1.04E-147 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12776 PF00072 Response_reg 1.80E-18 CL0304 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00375 - - rcu:8279875 345.51