Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00381 ATGGCCTACGCTTGTGCTTCTTCTGCCATTGCCGCCGTGGCCATCTCTTCTTCTTCCTCCTCTCCCTGTTCGCAGAAGGGTTGTGCTTTTCTCACCGGAAGCAAATTGAGAGTCAAGAAAGTGAACGGCTTTTGCAGCTCTAGGGCGGCGAGATCTGTGGCTGTTTGCGCTGCTGCCGATCCCGATAGGCCTTTGTGGTTCCCTGGTAGCACCCCTCCTCCGTGGCTCGACGGCTCTCTCCCCGGAGACTTTGGTTTTGATCCTCTTGGTCTAGGGTCTGATCCGGAGAGCCTGAGATGGAACCAGCAATCGGAGATAGTTCACTGCAGATGGGCCATGTTAGGCGCTGCCGGTATTTTCATCCCCGAGTTTCTCACCAAGATCGGCGTTCTCAACACTCCGTCGTGGTACACTGCCGGCGAGCTAACCTACTTCACCGACACTACCACTCTCTTCATAATTGAGCTCATTTTGATCGGATGGGCGGAGGGGAGAAGATGGGCTGACATCCTCAAGCCTGGAAGCGTCAACACTGACCCCATCTTCCCCAACAACAAGCTCACAGGCACCGACGTCGGCTACCCTGGCGGCCTCTGGTTCGACCCTCTCGGGTGGGGAACCGGATCACCGGAAAAAATCAAGGAGCTGAGAACAAAGGAGATCAAGAACGGTAGATTGGCTATGTTGGCGGTGATTGGTGCATGGTTCCAACACATCTACACTGGAACTGGCCCAATTGACAACCTCTTCGCCCACCTCGCCGATCCCGGCCACGCCACCGTTTTCGCTGTAAGTAGACCATCAATCGTCACTCAATCTAACAATTCGCCTCGATAA 837 54.84 MAYACASSAIAAVAISSSSSSPCSQKGCAFLTGSKLRVKKVNGFCSSRAARSVAVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNQQSEIVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGELTYFTDTTTLFIIELILIGWAEGRRWADILKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVIGAWFQHIYTGTGPIDNLFAHLADPGHATVFAVSRPSIVTQSNNSPR 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14647042 14648036 + BLOR21296 Blo09g00381 65008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00381 278 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 267 - -
Blo09g00381 278 SUPERFAMILY Chlorophyll a-b binding protein 58 264 - -
Blo09g00381 278 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 267 IPR001344 GO:0009765|GO:0016020
Blo09g00381 278 Pfam Chlorophyll A-B binding protein 72 238 IPR022796 -
Blo09g00381 278 Gene3D Chlorophyll a/b binding protein domain 73 258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01011 Blo-Chr3:36411646 Blo09g00381 Blo-Chr9:14647042 1.21E-47 dispersed
Blo03g01344 Blo-Chr3:39802686 Blo09g00381 Blo-Chr9:14647042 5.45E-51 dispersed
Blo04g00773 Blo-Chr4:7617799 Blo09g00381 Blo-Chr9:14647042 3.10E-73 dispersed
Blo09g00381 Blo-Chr9:14647042 Blo13g00003 Blo-Chr13:29525 5.85E-70 dispersed
Blo15g00312 Blo-Chr15:3585189 Blo09g00381 Blo-Chr9:14647042 1.96E-43 dispersed
Blo01g00576 Blo-Chr1:6296913 Blo09g00381 Blo-Chr9:14647042 1.75E-97 transposed
Blo02g00876 Blo-Chr2:33850929 Blo09g00381 Blo-Chr9:14647042 6.23E-35 transposed
Blo15g00783 Blo-Chr15:26712554 Blo09g00381 Blo-Chr9:14647042 6.30E-35 transposed
Blo07g01231 Blo-Chr7:32374725 Blo09g00381 Blo-Chr9:14647042 2.12E-124 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00381 K08908 - csv:101214055 450.669