Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00409 ATGGGGTTTTTGTGTTTTCTGTGTATTTTCCTTCTTGGGATGCTGTTAAAATCTCAGCCTGTAAGTTCTCAGGTTGACGATGAAGCGACTTTGGTAGCGATTAACCAAGAGCTTGGAGTTCCTGGATGGGGTTTGAACGGCTCAGATTACTGTTCTTGGCCCGGCATTGGTTGCAGCTTAAACCATTCGAGAGTGGAAAAGCTCGATCTCTCTCGTTTCCAGCTTAGAGGTAATTTGAGTCTACTTTCTGAGCTCAAAGCTTTGAAGTGGCTCGACCTCTCCTCTAACAATTTCCATGGTGAAATTTCTTCAGTTTTTGGAAATTTATCTGAGCTTGAGTTTCTTGATCTATCTTTGAATGCGTTTGATGGGTCAATTCCACTGGAATTGGGAGGTCTTATAAAGCTTAGATCACTGAACCTTTCTAATAACTTCCTTGTTGGGGAAATACCTGATGAGCTTCAAGGCCTAGAAAATTTGCAAGACTTTCAAATTTCTACTAATAGATTGAATGGTACAATTCCAAATTGGGTTGGGAATTTGACCAAATTGAGAGCTTTTTCTGCCTATGAGAATGAGTTTGGTGGTATAATTCCAGCTAATCTAGGCTTAGTTTCTGAGCTTCATTTGCTGAATCTTCACTCAAATCAGCTAGAAGGGCCTATACCTCAAAGCATATTCGCTTCAGGGACGTTGGAAGTATTAATTTTGACCCAAAACAAGTTAAATGGTAATCTTCCTGAAGAAATTGGAAGCTGCAAAAGCTTATCAAATGTTCGAATTGGGAATAACGATCTTGTCGGAGTCATTCCGAAGGAAATTGGAAATATTAGTAGCCTGACTTACTTTGAAGTTGACAATAACAACCTCTCCGGCGAGATTGTCGCCGATTTTGCCAATTGCTCTAACCTTACTCTTCTGAATTTAGCGTCAAATGGCTTTACTGGAGTTATTCCTTCTGAACTTGGGCAGCTAATGAATTTGCAAGAGCTGATTCTTTCAAGCAACAGTATTTTTGGAGATATCCCAGTTTCAATCCTCGGATGCAAGAATCTGAATAAGCTCGATTTAAGCTATAATCGATTTAATGGAAAGATTCCAACTGAAATCTGCAACTTACCCAGATTACAGTACTTGCTTTTGGATCAGAATTCGATTAAAGGAGAGATACCCAGTGAAATCGGAAATTGTACAAAGCTTCTTGAGCTGCAATTGGGTAGCAACTACTTGACTGGAAGTATACCTTCTGAGATTGGTCATATCAAGAATTTGCAGATTGCTTTGAACGTTAGTTTCAATAATCTTCATGGACCCCTGCCATTGGAACTAGCAAAACTAGACAAGCTGGTATCTCTAGATGTCTCTAATAATCATTTTTCCGGCAATATTCCACTGGCACTCAAGGGGATGATGAGTTTGATTGAGGTTAATTTCTCAAACAATCTGTTTAATGGTCCAATACCCATCTTTGTGCCATTCCAAAAGAGCTCAAATTCAAGCTTTTTGGGGAATAAAGGACTCTGTGGAGAGCCATTAGTCATTTCATGTGGAAGTTTCAGCAGTTCTGACCATTCAAATTACCGACATAAAGTTTCCTACCGGATTATATTGGCAGTCATTGGCTCAGGTTTAGCAGTTTTTGTATCAGTAACTGTAGTTGTTCTGCTGTTTATGATGAGGGAAAAACAAGAAAAAGCAGCCAAAACTTCCGAGACTGCTGATGAAGAAACTACCAATAATCAGCCCCCCATGATAATCGCAGGCAACGTCTTTGTGGAGAATCTCAGACAGGCGATAGATCTTGAAGCAGTTGTTAAAGCCAGCATGAAAGATTCAAATAAGCTCCATCTAGGAACTTTTAGCACAGTTTATAAAGCTGTTATGCCTTCTGGAATGATTATTTCAGTGAAGAGACTGAGATCGATGGATAGAACGATCATCAATCACCAGTCGAAGATGATCCGAGAGCTTGAACGGCTGAGTAAGCTTTGCCATGATAACTTAGTTCGACCAATCGGATTTGTTATTTACGAAGATGTTGCTCTTTTGCTACATCATTACTTACCAAACGGGACATTAGCTCAGCTTCTTCACGTCTCATCGAAGCAACCCGAGTATGAACCAGACTGGCCAACTAGACTTTCCATTGCCGTCGGAGTAGCTGAAGGATTAGCCTTTCTCCATAATGTGGCTATAATCCATCTTGATATTTCCTCCGGCAATGTTCTTTTAGACACAAATTTCACTCCTTTGGTCGGAGAAATTGAAATATCGAAACTCTTGGACCCCTCCAGAGGCACTGCAAGTATTAGTGCAGTTGCCGGATCGTTTGGCTACATTCCACCAGAATATGCATATACCATGCAAGTTACAGCTCCTGGTAATGTTTACAGCTATGGTGTGGTCTTGCTGGAAATCCTTACGAGTAGATTGCCAGCCGATGAGGAATTTGAAGAAGGTATTGATTTGGTGAAGTGGGTCCAGACTGCTCCGGCAAGAGGGGAAACCCCAGAGCAGATTCTTGATTCAAGACTAAGCACAGTCTCCTTTGGCTGGAGAAAAGAAATGCTTGCAGCCCTGAAAGTGGCATTACTCTGCACTGACAACACCCCGGCGAAACGGCCTAAAATGAAGAAAGTAGTAGAAATGCTCCAGGAAATCCAGCAAAGCTGA 2673 41.11 MGFLCFLCIFLLGMLLKSQPVSSQVDDEATLVAINQELGVPGWGLNGSDYCSWPGIGCSLNHSRVEKLDLSRFQLRGNLSLLSELKALKWLDLSSNNFHGEISSVFGNLSELEFLDLSLNAFDGSIPLELGGLIKLRSLNLSNNFLVGEIPDELQGLENLQDFQISTNRLNGTIPNWVGNLTKLRAFSAYENEFGGIIPANLGLVSELHLLNLHSNQLEGPIPQSIFASGTLEVLILTQNKLNGNLPEEIGSCKSLSNVRIGNNDLVGVIPKEIGNISSLTYFEVDNNNLSGEIVADFANCSNLTLLNLASNGFTGVIPSELGQLMNLQELILSSNSIFGDIPVSILGCKNLNKLDLSYNRFNGKIPTEICNLPRLQYLLLDQNSIKGEIPSEIGNCTKLLELQLGSNYLTGSIPSEIGHIKNLQIALNVSFNNLHGPLPLELAKLDKLVSLDVSNNHFSGNIPLALKGMMSLIEVNFSNNLFNGPIPIFVPFQKSSNSSFLGNKGLCGEPLVISCGSFSSSDHSNYRHKVSYRIILAVIGSGLAVFVSVTVVVLLFMMREKQEKAAKTSETADEETTNNQPPMIIAGNVFVENLRQAIDLEAVVKASMKDSNKLHLGTFSTVYKAVMPSGMIISVKRLRSMDRTIINHQSKMIRELERLSKLCHDNLVRPIGFVIYEDVALLLHHYLPNGTLAQLLHVSSKQPEYEPDWPTRLSIAVGVAEGLAFLHNVAIIHLDISSGNVLLDTNFTPLVGEIEISKLLDPSRGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTSRLPADEEFEEGIDLVKWVQTAPARGETPEQILDSRLSTVSFGWRKEMLAALKVALLCTDNTPAKRPKMKKVVEMLQEIQQS 890
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15081570 15084350 + BLOR21324 Blo09g00409 65036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00409 890 SUPERFAMILY Protein kinase-like (PK-like) 609 887 IPR011009 -
Blo09g00409 890 Gene3D Ribonuclease Inhibitor 176 263 IPR032675 -
Blo09g00409 890 Gene3D Transferase(Phosphotransferase) domain 1 688 890 - -
Blo09g00409 890 SUPERFAMILY L domain-like 261 513 - -
Blo09g00409 890 SUPERFAMILY L domain-like 48 338 - -
Blo09g00409 890 Pfam Leucine Rich Repeat 135 157 IPR001611 GO:0005515
Blo09g00409 890 ProSiteProfiles Protein kinase domain profile. 609 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo09g00409 890 Gene3D Phosphorylase Kinase; domain 1 570 687 - -
Blo09g00409 890 SMART LRR_typ_2 373 397 IPR003591 -
Blo09g00409 890 SMART LRR_typ_2 133 156 IPR003591 -
Blo09g00409 890 SMART LRR_typ_2 325 349 IPR003591 -
Blo09g00409 890 SMART LRR_typ_2 109 132 IPR003591 -
Blo09g00409 890 SMART LRR_typ_2 205 229 IPR003591 -
Blo09g00409 890 SMART LRR_typ_2 85 108 IPR003591 -
Blo09g00409 890 SMART LRR_typ_2 446 469 IPR003591 -
Blo09g00409 890 Pfam Protein kinase domain 613 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo09g00409 890 ProSitePatterns Tyrosine protein kinases specific active-site signature. 732 744 IPR008266 GO:0004672|GO:0006468
Blo09g00409 890 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 888 - -
Blo09g00409 890 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE TYROSINE-PROTEIN KINASE PXC3 4 888 - -
Blo09g00409 890 Pfam Leucine rich repeat 327 386 IPR001611 GO:0005515
Blo09g00409 890 Gene3D Ribonuclease Inhibitor 25 175 IPR032675 -
Blo09g00409 890 Gene3D Ribonuclease Inhibitor 264 518 IPR032675 -
Blo09g00409 890 CDD STKc_IRAK 615 887 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01763 Blo-Chr1:57375543 Blo09g00409 Blo-Chr9:15081570 9.94E-53 dispersed
Blo09g00409 Blo-Chr9:15081570 Blo07g00294 Blo-Chr7:3416424 7.00E-75 dispersed
Blo09g00409 Blo-Chr9:15081570 Blo01g00315 Blo-Chr1:3848579 3.70E-63 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84471 PF00069 Pkinase 8.20E-27 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00409 - - jre:109003510 1400.19