Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00412 ATGGGAACTCCGGAATTCCCAGATCTTGGAAAGCATTGTAGCGTTGAAGATTGCAAACAGATTGATTTCTTGCCCTTCACATGTGATCGCTGCCGCCAGGTTTTTTGTTTAGAGCATAGGAGCTACATTAAGCATAATTGTCCCAAAGCCGACAAAAAAGATGTCAGTGTCGTCGTTTGTCCGCTCTGTGCAAGTGGAGTTCGTCTAATTCCTGACGAAGATCCGAACATTACTTGGGACAGACATGTCAACTCCGAGTGCGATCCATCAAATTACGAGAAAGCAATGAAGAAGAAAAAGTGTCCGGTTCCCGGCTGCAGGGAAACCTTGACATTCTCAAACATGATTAAGTGCAGGGATTGCTCAGTAGACCATTGTCTGAAGCACAGATTTGGACCCGACCATAAATGTCCTGGACCAAAGAAACCAGAAGCATCATTTATGGGTCTTTTAAGTCGGAGTATAAAAGTCAATACGAAGCCTAATCAAGGACCTAAGTCATCTTCTTCGCCTAAGTGGGCTACAAGCTTTCTCAATGCAGCCTCCTCTGGCATAGGGAAAATAAGTGGGGAGATTAGCCAAGCCTGGCAGATTGCTCGAGATGGGGTTGGATCGAGCAGTTCGAATTTCGGCGGGGATAAACAGGAGGAATGCCCCCAATGCCATGCGAGATTTTCTTCTTTGACAGCTTTAGTAGAACATGTCGAAAAAGTGCACGAAAAGAGTAGAAAGGTCGTCGATGTCTGTCCAAAGTGTAGTCGGGGATTTCGGGATCCAGTTGCGCTCGTACAACACGTCGAAAGAGATCACGGCGGTACGTCAAAGGCTTAA 831 46.21 MGTPEFPDLGKHCSVEDCKQIDFLPFTCDRCRQVFCLEHRSYIKHNCPKADKKDVSVVVCPLCASGVRLIPDEDPNITWDRHVNSECDPSNYEKAMKKKKCPVPGCRETLTFSNMIKCRDCSVDHCLKHRFGPDHKCPGPKKPEASFMGLLSRSIKVNTKPNQGPKSSSSPKWATSFLNAASSGIGKISGEISQAWQIARDGVGSSSSNFGGDKQEECPQCHARFSSLTALVEHVEKVHEKSRKVVDVCPKCSRGFRDPVALVQHVERDHGGTSKA 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15101049 15102551 - BLOR21327 Blo09g00412 65039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00412 276 ProSiteProfiles Zinc finger C2H2 type domain profile. 216 244 IPR013087 -
Blo09g00412 276 ProSiteProfiles Zinc finger AN1-type profile. 7 55 IPR000058 GO:0008270
Blo09g00412 276 ProSitePatterns Zinc finger C2H2 type domain signature. 249 270 IPR013087 -
Blo09g00412 276 Gene3D - 2 59 IPR035896 -
Blo09g00412 276 SMART c2h2final6 247 270 IPR013087 -
Blo09g00412 276 SMART c2h2final6 216 239 IPR013087 -
Blo09g00412 276 SUPERFAMILY AN1-like Zinc finger 4 57 IPR035896 -
Blo09g00412 276 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 1 276 - -
Blo09g00412 276 ProSiteProfiles Zinc finger AN1-type profile. 95 145 IPR000058 GO:0008270
Blo09g00412 276 ProSitePatterns Zinc finger C2H2 type domain signature. 218 239 IPR013087 -
Blo09g00412 276 Gene3D - 81 149 IPR035896 -
Blo09g00412 276 Pfam AN1-like Zinc finger 101 141 IPR000058 GO:0008270
Blo09g00412 276 Pfam AN1-like Zinc finger 13 52 IPR000058 GO:0008270
Blo09g00412 276 ProSiteProfiles Zinc finger C2H2 type domain profile. 247 275 IPR013087 -
Blo09g00412 276 PANTHER ZINC FINGER AN1 AND C2H2 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 13 1 276 - -
Blo09g00412 276 Gene3D Classic Zinc Finger 197 275 - -
Blo09g00412 276 SMART AN1_Zf_4 13 52 IPR000058 GO:0008270
Blo09g00412 276 SMART AN1_Zf_4 101 142 IPR000058 GO:0008270
Blo09g00412 276 SUPERFAMILY AN1-like Zinc finger 93 144 IPR035896 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12779 PF01428 zf-AN1 3.00E-08 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00412 - - vvi:100255506 458.759