Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00418 ATGGACATGAATAGTTTGACTGTTAATACTGAAGATTCTTTTGTGAGTTTGCTTGAACTTGCTGCTAACGACGATATTGAGGGGTTCAAAAGATTAATTGAAATTGATCCTTCGGGCATTGATGAGGTTGGCCTATGGTATTGCCGGAAGAAAGGCTCAAAGCAGATGGTTAATGAGCATCGAACCCCATTAATGGTGGCTGCTACGTATGGTAGCCTCGAAGTTATGAAGCTGATTTTGTCATTGTCTGATGCTTATATAAACCACGCTGTTGGATTTGACAAAACTACTGCCCTCCATTGTGCTGCCTCTGGTGGAGCAATAAACTGTGTCGATGCTGTGAAATTGCTTTTATCTGCAGGGGCTGATCCGAACTTGATTGATGGAAGTGGACATTATCCCATCGATGTCATTGCTGTGCCTCCAAAGCTTTCAGATTCAAAGTTAATCCTCGAAGAACTTCTGAGAACAAATGGTTCTTCTGGCTTGACGGGAACATTGAATTCTAATTCGCCTCCCCTTATGTTGTCCCCTAAAAAGATCTCTTTGGATTTAGCATTTTCACAAGCTAATTCCAAATTGAACGATCTTCATGTCTCATCTTCTTCGGAGAAGAAAGAGTACCCTATCGATCCATCTCTCCCTGACATCAAGAACAGCATATACTCGACCGATGAATTTCGGATGTATTCGTTTAAGGTGCGGCCTTGTTCTCGGGCCTATTCGCATGATTGGACGGAGTGTCCTTTTGTCCATCCAGGAGAAAATGCTCGAAGAAGGGATCCGAGGAAGTACCATTACAGTTGTGTTCCTTGTCCCGATTTCAGAAAAGGGGCTTGTAGGCGTGGAGATTTGTGCGAATATGCCCATGGAGTTTTCGAGTGTTGGCTCCACCCGGCTCAGTATAGAACACGACTCTGCAAAGATGGTACAAGTTGTGCTAGAAGAGTTTGCTTCTTTGCCCACACTGATGAGGAGCTCCGGCCTTTATATGTATCGACCGGCTCTGCTGTTCCTTCTCCTCGGGCAGGTTCATCTGGGGCTTCTGTAATGGATTATGCCTCGGCCATGAATATCTTGCCTGGGTCTCCGTCGGCAATGTCTGTAATGTCTCCCACACCCTTCACACCTCCAATGTCTCCCTCAGGGGTCCACTCTTCGTTGGCTTGGCCTCTGCCAAATGTTCCGGCGTTGCATCTTCCTGGAAGCAATTTTCAGTCAAGTCGGCTGAGATCATCCGTAAATGCAAGAGATATTTTGACAGATGATTTTGATTTACTTCCAGACTTTGATATTCAGCAACAACAGCTTCTAAATGATCTATCTTGTCTCTCTCAGTCGAATATGGGTTCTAATTCTTTGAGCCGATCTGGTCGGATGAAAGCCCTAACCCCGTCGAATCTTGACGATCTGTTTTCTTCGGAGAGTTTGTCTCCGAGGTACACTGATCAGGCATTGACTTCTGCTGTTTTCTCCCCCACTCATAAGTCAGCTGTTCTTAGCCAATTTCAGCAGCAGCAGAGTATGCTGTCTCCTATCAACACCAACTTCTCCCCTAAAAATGTGGATCACCCTCTTTTACAGGCATCATTTGGGGTACCATCTGGAAGAATGTCTCCGAGAAATGTGGAACCCATCTCACCAATCAGCTCCCGCCTGTCGATGTTGGCTCAGCGAGAGAAACAGCAACAGCTTCGCAGCCTCAGCTCCCGTGAACTTGGTGCGAATTCTCTGCATGGCGGTGGGTCAGCTGGAAGCAGCTCTTGGTCTAAATGGGGATCTTCCAATGGAAAGCCTGACTGGGCTGTTTCGACTGATGAATACTGTAAGCTCCGCCGATCCTCTTCTTTCGAGCTAGGAAATAATGGGGAAGAGCCGGACTTATCATGGGTCCAGTCTCTTGTCAAAGAAACGCCCACCGATATGATGGAAAAGCAGACAATTCCATTTTCTGGGAATGCAAACAATGGCAAGACAGCAAGTGCAAGTTCTCAGAAGGAATCGACCGACCATGCCGTTTTGGGGGCATGGCTAGAACAAATGCAGCTCGATAATCTAGTAGCGCAGCAAAATTAA 2076 46.34 MDMNSLTVNTEDSFVSLLELAANDDIEGFKRLIEIDPSGIDEVGLWYCRKKGSKQMVNEHRTPLMVAATYGSLEVMKLILSLSDAYINHAVGFDKTTALHCAASGGAINCVDAVKLLLSAGADPNLIDGSGHYPIDVIAVPPKLSDSKLILEELLRTNGSSGLTGTLNSNSPPLMLSPKKISLDLAFSQANSKLNDLHVSSSSEKKEYPIDPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGACRRGDLCEYAHGVFECWLHPAQYRTRLCKDGTSCARRVCFFAHTDEELRPLYVSTGSAVPSPRAGSSGASVMDYASAMNILPGSPSAMSVMSPTPFTPPMSPSGVHSSLAWPLPNVPALHLPGSNFQSSRLRSSVNARDILTDDFDLLPDFDIQQQQLLNDLSCLSQSNMGSNSLSRSGRMKALTPSNLDDLFSSESLSPRYTDQALTSAVFSPTHKSAVLSQFQQQQSMLSPINTNFSPKNVDHPLLQASFGVPSGRMSPRNVEPISPISSRLSMLAQREKQQQLRSLSSRELGANSLHGGGSAGSSSWSKWGSSNGKPDWAVSTDEYCKLRRSSSFELGNNGEEPDLSWVQSLVKETPTDMMEKQTIPFSGNANNGKTASASSQKESTDHAVLGAWLEQMQLDNLVAQQN 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15146487 15148562 + BLOR21333 Blo09g00418 65045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00418 691 PANTHER UNKEMPT FAMILY MEMBER 3 688 IPR045234 -
Blo09g00418 691 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 271 291 IPR000571 GO:0046872
Blo09g00418 691 Gene3D - 4 155 IPR036770 -
Blo09g00418 691 MobiDBLite consensus disorder prediction 646 666 - -
Blo09g00418 691 SUPERFAMILY Ankyrin repeat 13 139 IPR036770 -
Blo09g00418 691 PRINTS Ankyrin repeat signature 60 75 IPR002110 GO:0005515
Blo09g00418 691 PRINTS Ankyrin repeat signature 113 127 IPR002110 GO:0005515
Blo09g00418 691 MobiDBLite consensus disorder prediction 573 599 - -
Blo09g00418 691 PANTHER ARM REPEAT CCCH-TYPE ZINC FINGER PROTEIN 3 688 - -
Blo09g00418 691 SMART c3hfinal6 301 324 IPR000571 GO:0046872
Blo09g00418 691 SMART c3hfinal6 266 292 IPR000571 GO:0046872
Blo09g00418 691 Gene3D - 268 329 - -
Blo09g00418 691 ProSiteProfiles Ankyrin repeat profile. 94 129 IPR002110 GO:0005515
Blo09g00418 691 ProSiteProfiles Ankyrin repeat region circular profile. 94 128 - -
Blo09g00418 691 ProSiteProfiles Zinc finger C3H1-type profile. 271 293 IPR000571 GO:0046872
Blo09g00418 691 SMART ANK_2a 94 126 IPR002110 GO:0005515
Blo09g00418 691 SMART ANK_2a 59 89 IPR002110 GO:0005515
Blo09g00418 691 Pfam Ankyrin repeats (3 copies) 26 128 IPR002110 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo07g00640 Blo09g00418 BCT
Blo07g01252 Blo09g00418 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00640 Blo-Chr7:20884032 Blo09g00418 Blo-Chr9:15146487 0 dispersed
Blo09g00418 Blo-Chr9:15146487 Blo11g00136 Blo-Chr11:1060843 0 dispersed
Blo15g00575 Blo-Chr15:11906893 Blo09g00418 Blo-Chr9:15146487 1.94E-53 dispersed
Blo07g01252 Blo-Chr7:32675860 Blo09g00418 Blo-Chr9:15146487 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12780 PF12796 Ank_2 7.70E-11 CL0465 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00418 - - mnt:21390368 1037.71