Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Blo09g00420	ATGGAGCATACTGACGGGACAGCTACTAGATCGACCCCCAACGGGCGTTTGCTTGACGAATGTGGGCTTGAATCACTCCAATTTCGCGAAGAAATTCAGAGATTGATCACCGCACCGCCGGAAAATGATACTTCATTCACTGCGCTTCTGGAACTTCCGGCAACGCAGGCGATGCAACTCCTCAACTCGTCAAACTCCGATGAGGTCTCGAAGAGAGGGATTCTCTTCAACGGCGACCACAAACCCTACTTCCATCCTTTCAGTGAAAATTTGACCGCTCCTCCCTGCTCATCTCCCGAACAGCACGCCCCGAAGTTTTCCGCCCTCGTCGGGAAGCAATCGCCGGAGGCGACAAGCTCGTCGCCGTCAAATTCGAATGCGAATTTGGAGAAGGTGAAAAGCGAGCCCATCGCAGAGAAAAATTCGACTCCCCACTCGTTACAGCCGTCAATCTTCGATCCATCGGCGGAAAACCCGAATCAGAAGTCTGCAAAGAGAAAGGAGCGCGACAAGAAGGGCAAAGGATCAGCAAAGAAGAGCAAAACGCAACAATCAGATGATTCGGAAAAGCTTCCATACATTCACGTCCGAGCTCGCCGCGGTCAGGCGACAGATAGCCATAGTCTAGCAGAGAGAGCGAGAAGAGAGAAGATAAATGCGCGTATGAAACTGCTTCAGGAGCTGGTCCCCGGATGCAATAAGATTTCGGGAACCGCTTTAGTTCTTGATGAAATTATCAACCATGTGCAGTCCTTGCAACGCCAAGTTGAGTTCTTGTCAATGAGACTTGCAGCCCTTTATCCAAGAATTGATTTCAATCTTGACAGTTTATTTGCTGCAGAAAGTGAATCTCTTCTGACTAGTAATTTCAACAGCGTGGTTACTCCTGTCATGTGGCCAAACGGTCCCCCCAGTGGAAACACACAACAATACCACCATCAATGGCATCTCGACTCAGTTTTGCAGGGAACTTGGGGAAGAACCCCAGAGAACTCGCTATTGACTCACGACTCCTCCCCACTTTCAGGCACAATTTCTGTGAAAGCTTTGAAACGAGTTAAATTGTTTGTCATATGTGATAAATTCAACTTGTCTGATCTGCCTCGCATCTGTTACGGTGCTGTACTGCCACGTCATCTTTCTGCAACTCTGGTGTTCTTCAGCTTTAACGTAGACGGCAGGATCGGAGATTGTCTACACAACACTTCTCCTCCTACTTCTTCTGCTTCTCCTTCTCCTCCTCCTCCTCCTTCCTACACAACACTCTTCCCCTCCTCTTTCTTCTTTTTCTTTTTGCCATTTTCTGTTGTGGGATTCTATTGTTTGTGGTCTATTCTGTACTTCCTTCTTCCTGCACACCATGATTATTTATGTGAAGATACTCTCTACTTTATGGATTTCGAAACGTATTTTCTTCAGGGTGCAGTGTTAACTAGAGATAACAATAGTGAAGGTGTAGATCATTCAAGTGATTTGGAGAAAGAATCAGATCAGGGGATGGCTGAGGTGCCAGATTCAGACGCAAAAAGAAATTTGGTTTCTTCACCAGGGGATTCTGCAGCAAAAGAAAATGCCAAAGTGGAAGATGATTCTGTTACTAATAAATCACCTAAAATAGCTAGTGAAGTATTTTCAAGAGTAAAAAACAGAAGTGTGAAAGTTGTTCCTAAACCTTCTTCAGAGACTTCTGAGGAAATTGAGGATGAAAGTTTTGCCCGAGTGAAAGAATATCATGTTTCAGATTACTCAAATGGCGCCCAGGGCATGGATGGTTCTGCTAAAACTTTTGATGATGAAGAAAATAGTCAGCTTTATGAAGAACAAAGTATTGAGGAAATGGAAATGAGAATTGATAAACTTGAAGAGGAGTTAAGAGAAGTTGCAGCTCTTGAAATATCACTCTATTCTGTGGTACCAGAGCATGGTTGTTCAGCACATAAGGTGCATACACCTGCTCGACGACTTTCTAGACTCTATATTCATGCTTGTAAGCACTGGGCTCAAAGCAGACGCGCTACAATTGCGAAGAATACTGTATCTGGGCTTGTTATAATTGCAAGGTCATGTGGTACTGATGCTCCAAGGTTAACTTTCTGGTTGTCAAACACTGTTGTACTGAGAGAAATAATCTCCCAAGCATTTGGGAATACTCGTTATTCAAGTTCAGTGGGAAGGTCTACAGAATCAAATGGCAGTAGCAAGAAAAGTGAAGGAAAGCCCTCGACGTTAAAATGGAAGGGTAATTTTGGTAGTAAACAAGTCAATGGTAAAATGAAAGACGTCGAGGATTGGCAGGAAGCAGGAACATTTATGGCTGCTTTAGTTAGAGTAGAATCATGGATTTTCTCACGAATAGTTGAGTCTGTATGGTGGCAGGCTTTGACACCAAACATGCAATCTCAAGGCGATAATACAACCTTCGACCAAAACAGTGGAAGTTTATCAGGGCCTCTACTTGGAGATCAACAAGAAGGCAATTTTTCTATAGATTTGTGGACGAGTACTTTCCAGGATGCTTTTCGACGATTATGTCCTGTTAGAGCAGCAGGTCACCTTTGTGGCTGTTTGCCAGTGTTGGCAAAATTGGTTATGGAATACTGTGTTGCCAGACTTGATGTGGCTATGTTCAATGCTATTCTGCGCGAGTCAGCCCATGAGATTCCTACTGATCCTGTATCAGATCCTATAGTGGATCCCAAAGTTCTACCTATTCCTGCTGGGGATTTGAGTTTTGGATCTGGCGCACAACTAAAAAATTCTATTGGAAATTGGTGTAGCTGGCTAACCGAAAATCTTAGCATGGGTACTGCAAATTGTTTGGAAGTTAAGCAACACAGTGAGAATGATAATATGCAACGTGAAGGATGTGGATCGAAATCATTTGTTCTTCTCAATTCCTTGAGTGATCTTTTGATGCTTCCAAAAGACATGCTCATGGACCATGAAATCAGAGAAGAGGTTTGCCCCCTGATTAGTCTCTCCTTGATTAAAAGGATACTCTGTAACTTCACTCCAGATGAGTTCTGTCCGGATCCTGTCCCAGGAGCTCTCTTGGAGGCATTGAATGCTGAGAATGTTGTGGAGCGAAGATCAACCCAAGACCCATCAAGAAACTTCCCCTATACAGCCGCCCCGGTTGTGTACAACCCTCCTTCCACATCCGACGTAGCCGAAAAAGTTGCAGAGGCTGGAGGCAAATCTGCTCTAGAAAGAAACGTTTCTCAGATCCAGAGGAAAGGCTATACAAGTGATGAAGAACTGGAAGAACTGAATTCTCCCCTCACTTCAATCATTGATAATCTCTCCCTCTCTTCTCCCAGCTTCAAGGCGATCAGCAATGGCGGATTTGAAGAGCATTCTGATTTTATCTCAAGAAACACGAGGTACGAGCTCCTTGGCGATGTTTGGTCTCTTTGA	3417	44.34	MEHTDGTATRSTPNGRLLDECGLESLQFREEIQRLITAPPENDTSFTALLELPATQAMQLLNSSNSDEVSKRGILFNGDHKPYFHPFSENLTAPPCSSPEQHAPKFSALVGKQSPEATSSSPSNSNANLEKVKSEPIAEKNSTPHSLQPSIFDPSAENPNQKSAKRKERDKKGKGSAKKSKTQQSDDSEKLPYIHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAALYPRIDFNLDSLFAAESESLLTSNFNSVVTPVMWPNGPPSGNTQQYHHQWHLDSVLQGTWGRTPENSLLTHDSSPLSGTISVKALKRVKLFVICDKFNLSDLPRICYGAVLPRHLSATLVFFSFNVDGRIGDCLHNTSPPTSSASPSPPPPPSYTTLFPSSFFFFFLPFSVVGFYCLWSILYFLLPAHHDYLCEDTLYFMDFETYFLQGAVLTRDNNSEGVDHSSDLEKESDQGMAEVPDSDAKRNLVSSPGDSAAKENAKVEDDSVTNKSPKIASEVFSRVKNRSVKVVPKPSSETSEEIEDESFARVKEYHVSDYSNGAQGMDGSAKTFDDEENSQLYEEQSIEEMEMRIDKLEEELREVAALEISLYSVVPEHGCSAHKVHTPARRLSRLYIHACKHWAQSRRATIAKNTVSGLVIIARSCGTDAPRLTFWLSNTVVLREIISQAFGNTRYSSSVGRSTESNGSSKKSEGKPSTLKWKGNFGSKQVNGKMKDVEDWQEAGTFMAALVRVESWIFSRIVESVWWQALTPNMQSQGDNTTFDQNSGSLSGPLLGDQQEGNFSIDLWTSTFQDAFRRLCPVRAAGHLCGCLPVLAKLVMEYCVARLDVAMFNAILRESAHEIPTDPVSDPIVDPKVLPIPAGDLSFGSGAQLKNSIGNWCSWLTENLSMGTANCLEVKQHSENDNMQREGCGSKSFVLLNSLSDLLMLPKDMLMDHEIREEVCPLISLSLIKRILCNFTPDEFCPDPVPGALLEALNAENVVERRSTQDPSRNFPYTAAPVVYNPPSTSDVAEKVAEAGGKSALERNVSQIQRKGYTSDEELEELNSPLTSIIDNLSLSSPSFKAISNGGFEEHSDFISRNTRYELLGDVWSL	1138

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
9	15172382	15184728	-	BLOR21335	Blo09g00420	65047

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Blo09g00420	1138	Coils	Coil	242	262	-	-
	Blo09g00420	1138	MobiDBLite	consensus disorder prediction	139	159	-	-
	Blo09g00420	1138	Pfam	Helix-loop-helix DNA-binding domain	206	253	IPR011598	GO:0046983
	Blo09g00420	1138	MobiDBLite	consensus disorder prediction	111	193	-	-
	Blo09g00420	1138	SMART	finulus	208	258	IPR011598	GO:0046983
	Blo09g00420	1138	Coils	Coil	603	630	-	-
	Blo09g00420	1138	SUPERFAMILY	HLH, helix-loop-helix DNA-binding domain	200	271	IPR036638	GO:0046983
	Blo09g00420	1138	MobiDBLite	consensus disorder prediction	175	193	-	-
	Blo09g00420	1138	MobiDBLite	consensus disorder prediction	719	750	-	-
	Blo09g00420	1138	CDD	bHLH_AtBPE_like	192	277	-	-
	Blo09g00420	1138	MobiDBLite	consensus disorder prediction	112	131	-	-
	Blo09g00420	1138	MobiDBLite	consensus disorder prediction	484	504	-	-
	Blo09g00420	1138	PANTHER	NUCLEOLAR PROTEIN GAR2-LIKE PROTEIN	121	1137	-	-
	Blo09g00420	1138	Gene3D	-	199	271	IPR036638	GO:0046983
	Blo09g00420	1138	PANTHER	NUCLEAR PORE COMPLEX PROTEIN NUP205	121	1137	IPR021827	GO:0005643
	Blo09g00420	1138	ProSiteProfiles	Myc-type, basic helix-loop-helix (bHLH) domain profile.	202	252	IPR011598	GO:0046983
	Blo09g00420	1138	MobiDBLite	consensus disorder prediction	482	534	-	-
	Blo09g00420	1138	MobiDBLite	consensus disorder prediction	719	738	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	Blo09g00420	Blo12g00594	CCT

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Blo09g00420	Blo-Chr9:15172382	Blo18g00302	Blo-Chr18:3142888	1.49E-169	dispersed
	Blo12g00594	Blo-Chr12:24232549	Blo09g00420	Blo-Chr9:15172382	6.59E-94	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	12781	PF00010	HLH	5.90E-05	No_clan	Blo	TF

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Blo09g00420	-		-	qlo:115952689	810.831