Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00427 ATGGCCCATCATCTCTTAACGGCTTCAACGGTTTTAGCTGACGTGGTTTCCATGTCAGCATTCGCCTGCAAAAATACTCTTTCCTGCAACTGCGTCATTTTAGTCACTGTCTTTTCAGTTTCTAGCTCTCTCTCACTCTCTCTCTCTCTCTCTGGTCATATTTTCTCGCCAGGCAAACAGTTGGTTATCGTCTTCGTCAAAGAATTCTCTCTTTATCCAGTCCTAGAGCAGAGGTTTTTCACTTTCGATTTGGAGTTAAAGAGAAAGAAGAAGAATCTGTCGAAAGAAATGAGCAGATATGTCGCATTCAGGTGTTTCGCTATAGCTGTCTTCTTGACAATTCTTGCCGCACCGGCTCAGGCATTAACTGACCAACGCGACGTCGAAGCTCTTCAAGATTTGTTCAGGGCTCTGAACTGTTCATCAGCTCTTAAGGGCTGGAGATTAGATAGCGTGGATCCCTGTGAAGAATTATGGACAGGAGTTTCTTGTTCTGGGTCATCTGTAATACATCTGGATGTTAGCTCCAATAGAATTCAGGGTAAAATTCCAGAAGGCCTTCCGCCTAATGCTACTCATATAAATATGGCATGCAACAATTTAAACGAAAGTATTCCTTATACTTTATCTGTCATGAAAAGCCTTCGCCATCTGGATTTGTCATTCAATAACTTCTCAGGGGATCTACCTAGTTCATTTGGATCTCTGACAAATATCACGAAGTTGTTTTTACAGAATAACAAGTTCACTGGATCAGTTGCCTACTTGGCTAACCTATCGCTATCTGATCTGAATATCCAAGAAAATTTTTTTAGTGGTATTATTCCCATGAATTTTCATACCATACCAAATTTATGGCTTGGAGGGAATAAGTTTCATGTATGGGACACCCCACCTTGGAATTTCCCTTTGGATTCAGTACCTAGGAATCAAAACATTAGTGGCCCTCCTACGTCTGAGTCCAGTGCAATTGAGAATAGTCCCTCTATTAGAAAGATTGAGCATAAGAAAAGAAAGCTGGGACCTGGTGGTATAGCTTTCATGGTTGGTGGTGCAACTCTAATGGCAACTTGTATAGCTCTTTATGTTGTTATCCAAGTAAATCGATCCCGAGCAAATAAGCGTACAAGCTTGGCAACTTATGATGCTTCTTCTCATTCTCTTCCTATCAACACAACTGGAGAGGAGATTTCTTTTACACTGCCACAGATGATGGCTGTCCGTTCTCCACCCCTTCTTGCTCCAATGCGCAAATCTCCAATATACCACACAGGGAATGAAATGCCGTCAAAAAGAAAAAGTTTTTCTGAGAGAGGCAGATTGTCATTCAGAACAAAAATTTTTACTGTCGCAGAGCTTCAATTTGCTACAAACAGCTTCAGTGAAGAAAACCTTCTTGGGGAGGGATCTCTTGGTTCTGTTTACAAAGCAAAATTTCCTGATGGTCAAGTCTTGGCTGTGAAGAATATCAACCTGGTGGCACTATCTGTCACTGAAGAAGATGAGTTCTTGGATGTGGTTTGGACGGCATCATGTTTGAGGCATCCTAACATAGTACCACTTATCGGTCACTGCACAGAGCATGGACAGCATCTTCTTGTGTATGAATACATCCCTAATTTGACTCTTTATGATGCTTTGCACGGTGATGCCTGCAAACCTCTGTCATGGAGAATGAGAATCCAGATTGCCCTCGGCATTGCAAGGGCTTTGGCTTATTTACACTCTACATTTTCACAACCTTCTGCTCATTACAATCTGAAGGCTGCCAATATCTTACTAGACAAAGATCTAACGCCTCATGTTTCTGACTGCGGGCTAGCTGTTTTGAGGCCACTTACTAGCACCAGAGTTAAAATTAAGGCAAGTACTTTGGCATCTGAAATTGCCATTGGTGATAGCGGCTACATTGCACCTGAACACGGCCAACCAGGAACTGATGTTACAAAGAGTGACGTGTATGCTTTTGGAGTTTTGCTGTTGGAGCTGGTAACAGGAAGGAAACCCTTTGACGATTCAAGACATATAAAAGAGCAGTCTCTAGTAAACTGGGCTTCGTCTAGACTACATGACAATGAGAGTTTAAAGCAGATGGTTGATCCAAGAATTAAAGGAACATTTTCCTCGAAGACTCTCTCCCACTACACTGATATAGTCTCCCTCTGTATACAGCAGCCAGTGAAGGAATTCCGGCCACCAATGGCAGAAGTAGTGGAATCACTTGCCGGAATTGTCCGACAGCTAAAGCAGGCAAAAAGTGGTGCACCAGAACCAGAAGGTACTGATATTGTTCCTCCTGATATGTCTTTTCGTTCGACCAATACCCGCTTCATAGGTTCGCCGTCTTTGAGCATTTTATCCATCTGA 2367 42.5 MAHHLLTASTVLADVVSMSAFACKNTLSCNCVILVTVFSVSSSLSLSLSLSGHIFSPGKQLVIVFVKEFSLYPVLEQRFFTFDLELKRKKKNLSKEMSRYVAFRCFAIAVFLTILAAPAQALTDQRDVEALQDLFRALNCSSALKGWRLDSVDPCEELWTGVSCSGSSVIHLDVSSNRIQGKIPEGLPPNATHINMACNNLNESIPYTLSVMKSLRHLDLSFNNFSGDLPSSFGSLTNITKLFLQNNKFTGSVAYLANLSLSDLNIQENFFSGIIPMNFHTIPNLWLGGNKFHVWDTPPWNFPLDSVPRNQNISGPPTSESSAIENSPSIRKIEHKKRKLGPGGIAFMVGGATLMATCIALYVVIQVNRSRANKRTSLATYDASSHSLPINTTGEEISFTLPQMMAVRSPPLLAPMRKSPIYHTGNEMPSKRKSFSERGRLSFRTKIFTVAELQFATNSFSEENLLGEGSLGSVYKAKFPDGQVLAVKNINLVALSVTEEDEFLDVVWTASCLRHPNIVPLIGHCTEHGQHLLVYEYIPNLTLYDALHGDACKPLSWRMRIQIALGIARALAYLHSTFSQPSAHYNLKAANILLDKDLTPHVSDCGLAVLRPLTSTRVKIKASTLASEIAIGDSGYIAPEHGQPGTDVTKSDVYAFGVLLLELVTGRKPFDDSRHIKEQSLVNWASSRLHDNESLKQMVDPRIKGTFSSKTLSHYTDIVSLCIQQPVKEFRPPMAEVVESLAGIVRQLKQAKSGAPEPEGTDIVPPDMSFRSTNTRFIGSPSLSILSI 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15243225 15248767 - BLOR21342 Blo09g00427 65054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00427 788 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 171 218 - -
Blo09g00427 788 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 213 750 - -
Blo09g00427 788 MobiDBLite consensus disorder prediction 306 330 - -
Blo09g00427 788 Gene3D Ribonuclease Inhibitor 122 343 IPR032675 -
Blo09g00427 788 Pfam Leucine rich repeat N-terminal domain 125 165 IPR013210 -
Blo09g00427 788 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 105 171 - -
Blo09g00427 788 Gene3D Transferase(Phosphotransferase) domain 1 538 759 - -
Blo09g00427 788 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 105 171 - -
Blo09g00427 788 SUPERFAMILY L domain-like 129 293 - -
Blo09g00427 788 Pfam Leucine rich repeat 190 249 IPR001611 GO:0005515
Blo09g00427 788 SUPERFAMILY Protein kinase-like (PK-like) 435 741 IPR011009 -
Blo09g00427 788 MobiDBLite consensus disorder prediction 306 328 - -
Blo09g00427 788 Pfam Protein kinase domain 461 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo09g00427 788 ProSiteProfiles Protein kinase domain profile. 460 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo09g00427 788 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 171 218 - -
Blo09g00427 788 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 213 750 - -
Blo09g00427 788 Gene3D Phosphorylase Kinase; domain 1 424 537 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00427 Blo-Chr9:15243225 Blo13g00991 Blo-Chr13:32330973 3.75E-102 dispersed
Blo09g00427 Blo-Chr9:15243225 Blo15g00549 Blo-Chr15:10661309 2.59E-104 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84472 PF00069 Pkinase 9.50E-32 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00427 - - qsu:112030392 843.958