Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00434 ATGGCAGAAACTGAGGATATTCAGCCTCTTGTATGCGACAATGGAACAGGAATGGTCAAGGCTGGATTTGCTGGAGATGACGCTCCAAGGGCTGTATTTCCTAGCATTGTAGGACGTCCTCGACACACTGGTGTAATGGTTGGTATGGGTCAAAAGGATGCTTATGTTGGTGATGAGGCTCAATCCAAGAGAGGTATTTTGACATTAAAATACCCAATCGAGCATGGTATTGTTAGCAATTGGGATGACATGGAAAAAATTTGGCACCACACATTCTATAATGAGCTTCGTGTGGCTCCGGAAGAGCATCCAGTTCTCCTTACAGAAGCCCCTCTTAACCCCAAGGCTAATCGTGAAAAGATGACACAAATTATGTTTGAGACCTTCAATACTCCGGCAATGTATGTTGCTATCCAGGCCGTACTTTCCCTTTATGCCAGTGGTCGTACAACTGGTATTGTCCTGGATTCTGGAGATGGTGTCAGCCATACAGTTCCAATATATGAAGGATATGCTCTTCCACATGCCATCCTTCGTTTGGATCTGGCAGGCCGAGATCTCACAGATGCCCTAATGAAAATCTTGACTGAACGTGGTTACTCTTTCACCACCACTGCTGAACGTGAAATTGTAAGAGACGTGAAAGAGAAATTAGCTTACATTGCCCTTGACTATGAACAAGAGCTTGAAACATCGAAAACCAGTTCTTCCGTGGAGAAGAGCTACGAGCTACCAGATGGACAAGTGATCACAATTGGTGCTGAAAGATTCAGATGCCCTGAAGTACTCTTCCAGCCATCCATGATCGGAATGGAAGCTGCTGGCATACACGAAACAACGTACAACTCTATCATGAAGTGTGATGTTGACATTAGGAAGGATCTTTATGGCAACATCGTGCTCAGTGGTGGTTCTACTATGTTCCCTGGTATTGCTGATAGAATGAGCAAGGAGATTACAGCATTAGCTCCCAGTAGCATGAAGATTAAGGTGGTAGCACCACCAGAGAGGAAGTATAGTGTCTGGATTGGAGGCTCCATTTTAGCTTCTCTCAGCACTTTCCAACAGATGTGGATTTCAAAGGCCGAGTACGACGAGTCTGGCCCGTCGATTGTGCACCGGAAATGCTTCTAA 1134 45.24 MAETEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPSIVHRKCF 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15322752 15324547 - BLOR21349 Blo09g00434 65061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00434 377 SMART actin_3 7 377 IPR004000 -
Blo09g00434 377 Pfam Actin 5 377 IPR004000 -
Blo09g00434 377 PANTHER ACTIN 3 1 376 - -
Blo09g00434 377 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
Blo09g00434 377 ProSitePatterns Actins signature 2. 358 366 IPR004001 -
Blo09g00434 377 Gene3D - 140 340 - -
Blo09g00434 377 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Blo09g00434 377 PANTHER ACTIN 1 376 IPR004000 -
Blo09g00434 377 SUPERFAMILY Actin-like ATPase domain 149 377 IPR043129 -
Blo09g00434 377 Gene3D Actin; Chain A, domain 4 182 273 - -
Blo09g00434 377 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Blo09g00434 377 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Blo09g00434 377 Gene3D - 10 371 - -
Blo09g00434 377 PRINTS Actin signature 51 62 IPR004000 -
Blo09g00434 377 PRINTS Actin signature 238 254 IPR004000 -
Blo09g00434 377 PRINTS Actin signature 63 85 IPR004000 -
Blo09g00434 377 PRINTS Actin signature 142 161 IPR004000 -
Blo09g00434 377 PRINTS Actin signature 28 37 IPR004000 -
Blo09g00434 377 PRINTS Actin signature 117 130 IPR004000 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00108 Blo-Chr4:922039 Blo09g00434 Blo-Chr9:15322752 0 dispersed
Blo04g00277 Blo-Chr4:2106707 Blo09g00434 Blo-Chr9:15322752 0 dispersed
Blo07g00639 Blo-Chr7:20766735 Blo09g00434 Blo-Chr9:15322752 5.17E-58 dispersed
Blo07g00858 Blo-Chr7:26992515 Blo09g00434 Blo-Chr9:15322752 1.30E-40 dispersed
Blo09g00434 Blo-Chr9:15322752 Blo16g00535 Blo-Chr16:22174140 0 dispersed
Blo14g00781 Blo-Chr14:24293763 Blo09g00434 Blo-Chr9:15322752 4.21E-49 dispersed
Blo15g00369 Blo-Chr15:5036949 Blo09g00434 Blo-Chr9:15322752 4.57E-78 dispersed
Blo09g00434 Blo-Chr9:15322752 Blo14g00119 Blo-Chr14:859346 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00434 K10355 - fve:101313911 748.043