Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00446 ATGGGTGGGTGGGACCCGGAGAGCTACGACCCGGTAAAGGACGTCTTCGTCTACGAGTTCACAACTCAACGATGGAGTAAAGGAAAGGATATGCCGGACAACCGGTCTTTCTTCGCCGCAAGCGAGAAGGACGGTTTTATCTACATTGCCGGCGGTCGCGACGAGAGCAAGAATGCGTTGAACTCGGCATGGGTATACGACGTCAGCAGGGACGAATGGAACGAGTTGACTCGGATGAACCAGGAGCGAGACGAGTGCGAAGGGGTAGTCATCGGATCCGAGTTCTGGGTGGTTAGCGGATACTGCACAGAAAACCAAGGAAGGTTTGGGAGAACCGCAGAAGTTTACCAAATCGGAAGTGGTCAGTGGAGACTAGTCGAGGACGCCTGGAAAGGGACTGAATGTCCGAGATCATGCGTCGGAATCGGGAAAGATGGGAGTTTGTTTATCTGGTCCGAGTTTGACTCGGCGATCCGAGTTGGAGTGACTGCGATTAATATGGGTAATCTGACTCTTCTGTCCGGATCAGATTATCAAGGGGGACAGCATGGATTGTTCACGGTTCAAGATCAAAATGAGCACGAATGTGAACATGAGCATTCTGGGGCGCTAGCATCCTCTCAGAGCTCAGGTTCGCGAAATTTTGATCCGGGTGTTTCGGAAGCATTGAATAAGCCGTCACCTGATTGTGATGATAATAATGTCACCATTGATCAGAAAATAAAAGTAGAGGAAACGAATAAATCTGTGGCACCAAAAAGGAAGAACAGGCAAGATGAAGGAAATTTGGAATCAAGGTATACAAAGTATAGAAAGTCATCGACACTGGTGGATGATGGGAGCTCACCATTTGCATTAGGTTCTACAAACGAAGAGGAAGAAAAGAAGCATTACGAGGAATCCGCCCACCATTGGGAGAAAGCATTGTCATCTCCCAAGCCTTCTCAAATTTCTCTCTATTTCGCTCTTGTTTTCATCTTGAGGCCTGAGCTAGTGGTGTGTGAGCGCTCAGATGGACAGGGTGGCATTGATTCTGAGGAAGAGGAAAGTGATTATGATGATGAGGAGATTGATAATGGGGATGTGGGTGAAGCTACAACTGATGCCCCTGGACACAGATATCTGCAGACAAATGCCAGTGACAGTGACGATCCTGATGAACAAAAGCGTGTAATCAGGTCGGCCAAAGATAAGCGTTTTGATGAGATGTCTGCCACTGTCGACCAGATGAAGAATGCTATGAAGATCAATGATTGGGTGTGCTTACAGGAGAATTTTGATAAGATAAATAAACAGCTTGAGAAAGTCATGCGGGTCACTGAGTCGGAAAAGATCCCCTTCCTATACATCAAAGCACTTGTCATGCTGGAAGACTTTCTGAACCAGGCCTTGACAAACAAGGAAGCTAAGAAAAAGATGAGTAGCAGTAATGCTAAGGCCCTGAATGCAATGAAACAGAAGCTAAAGAAGAACAACAAACAATATGAAGAAGCTATCAACAAGTACAGGGAGAATCCTATCAGCGAGGAGGAAAAAGGTGAAGAGGAGACAGAAGAGGAGACAGAGACAGATACTGATTTTGATGAAGATCCTACAAAATTGGTAGAGTCAGGATCTGAAGATGAAGAGAANTTTTTGTTGGCTGCTTTCTGTTTAGACATTTTCTCTATTTATTGA 1677 45.74 MGGWDPESYDPVKDVFVYEFTTQRWSKGKDMPDNRSFFAASEKDGFIYIAGGRDESKNALNSAWVYDVSRDEWNELTRMNQERDECEGVVIGSEFWVVSGYCTENQGRFGRTAEVYQIGSGQWRLVEDAWKGTECPRSCVGIGKDGSLFIWSEFDSAIRVGVTAINMGNLTLLSGSDYQGGQHGLFTVQDQNEHECEHEHSGALASSQSSGSRNFDPGVSEALNKPSPDCDDNNVTIDQKIKVEETNKSVAPKRKNRQDEGNLESRYTKYRKSSTLVDDGSSPFALGSTNEEEEKKHYEESAHHWEKALSSPKPSQISLYFALVFILRPELVVCERSDGQGGIDSEEEESDYDDEEIDNGDVGEATTDAPGHRYLQTNASDSDDPDEQKRVIRSAKDKRFDEMSATVDQMKNAMKINDWVCLQENFDKINKQLEKVMRVTESEKIPFLYIKALVMLEDFLNQALTNKEAKKKMSSSNAKALNAMKQKLKKNNKQYEEAINKYRENPISEEEKGEEETEEETETDTDFDEDPTKLVESGSEDEEXFLLAAFCLDIFSIY 558
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15545140 15555807 + BLOR21361 Blo09g00446 65073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00446 558 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 379 532 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Blo09g00446 558 MobiDBLite consensus disorder prediction 274 288 - -
Blo09g00446 558 SMART kelc_smart 1 45 IPR006652 GO:0005515
Blo09g00446 558 SMART kelc_smart 46 93 IPR006652 GO:0005515
Blo09g00446 558 MobiDBLite consensus disorder prediction 246 297 - -
Blo09g00446 558 Gene3D - 1 165 IPR015915 GO:0005515
Blo09g00446 558 MobiDBLite consensus disorder prediction 342 362 - -
Blo09g00446 558 MobiDBLite consensus disorder prediction 337 391 - -
Blo09g00446 558 Pfam Kelch motif 1 32 IPR006652 GO:0005515
Blo09g00446 558 Pfam Kelch motif 35 80 IPR006652 GO:0005515
Blo09g00446 558 MobiDBLite consensus disorder prediction 498 535 - -
Blo09g00446 558 PANTHER F-BOX/KELCH-REPEAT PLANT-LIKE PROTEIN 1 192 - -
Blo09g00446 558 MobiDBLite consensus disorder prediction 202 217 - -
Blo09g00446 558 PANTHER OS02G0208700 PROTEIN 1 192 IPR044595 GO:0080037|GO:2000762
Blo09g00446 558 SUPERFAMILY Kelch motif 1 175 IPR015915 GO:0005515
Blo09g00446 558 Coils Coil 478 505 - -
Blo09g00446 558 MobiDBLite consensus disorder prediction 196 234 - -
Blo09g00446 558 MobiDBLite consensus disorder prediction 511 527 - -
Blo09g00446 558 MobiDBLite consensus disorder prediction 246 273 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00446 Blo-Chr9:15545140 Blo16g00903 Blo-Chr16:36892839 7.48E-39 dispersed
Blo12g00625 Blo-Chr12:24489104 Blo09g00446 Blo-Chr9:15545140 3.37E-40 wgd
Blo14g00254 Blo-Chr14:2390056 Blo09g00446 Blo-Chr9:15545140 2.17E-79 wgd
Blo08g00071 Blo-Chr8:700107 Blo09g00446 Blo-Chr9:15545140 1.47E-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00446 - - qsu:111994465 295.434