Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00464 ATGAATGATTTGTTCTCTTCCCGGTCTTTCTCCCGCGATCGCCCCGGCGTCGAGATGACCAATTCGAATTCAGAAACCGCCGTCAACCTCGACAAGTTCTTCGAGGACGTCGAGTCCGTGAAGGACGAGCTGAAGGAGCTCGAGGATTTGTTTTCCCGATTGCAACGCTCTCATGAGCAGAGCAAGACTCTCCACAACGCTAAGGCCGTGAAGGAGCTCCGTTCACGCATGGATTCCGACGTATCGCTCGCTCTCAAGAAAGCGAAGCTCATTAAGGTCCGATTGGAAGCTCTTGACAGGGCTAACGCTGCTAATCGGAGCTTGCCTGGTTGCGGACCTGGATCTTCGTCGGACCGGACTAGAACGTCGGTGGTCAACGGGCTGAGGAAGAAGCTGCATGATGCTATGGAGAGCTTCAACAATCTGAGGCAGCAGATCTCATCTGAGTACAGGGAAACCGTAGAGCGGAGGTACTTCACTGTGACCGGTGAAAATCCCGACGAGAAAACCCTTGACCGGTTGATCTCAACAGGCGAAAGTGAGACATTCTTGCAGAAAGCCATTCAAGAACAAGGAAGAGGCAGAGTTTTGGACACCATTAATGAGATTCAAGAGAGGCATGATGCAGTTAAAGATATGGAGAAGAACCTCAAGGAACTCCACCAAGTTTTCATGGATATGGCTGTGTTGGTGCAGGCTCAAGGAGAGCAACTGGACGACATCGAGAGCCAGGTGGCGAGGGCTCATTCGTTCGTCAGAGGCGGAACACAGGAGTTGCATACGGCAAGGGTGTACCAGAAAAATACTCGGAAATGGGTAATTATTTCTACCATTGTTTTGCTTATTATCATCATTGTGATTGTTCTGATAGTCGTAAAGCCTGGAAGTAAAAGTGGGAATAGTGGAAATAGTGGGAATACAACACCAACTTAG 933 49.52 MNDLFSSRSFSRDRPGVEMTNSNSETAVNLDKFFEDVESVKDELKELEDLFSRLQRSHEQSKTLHNAKAVKELRSRMDSDVSLALKKAKLIKVRLEALDRANAANRSLPGCGPGSSSDRTRTSVVNGLRKKLHDAMESFNNLRQQISSEYRETVERRYFTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRVLDTINEIQERHDAVKDMEKNLKELHQVFMDMAVLVQAQGEQLDDIESQVARAHSFVRGGTQELHTARVYQKNTRKWVIISTIVLLIIIIVIVLIVVKPGSKSGNSGNSGNTTPT 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15786007 15788036 - BLOR21379 Blo09g00464 65091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00464 310 Gene3D - 28 160 - -
Blo09g00464 310 CDD SynN 30 187 IPR006011 GO:0016020
Blo09g00464 310 PANTHER SYNTAXIN 9 294 IPR045242 -
Blo09g00464 310 CDD SNARE_syntaxin1-like 199 259 - -
Blo09g00464 310 SUPERFAMILY t-snare proteins 29 255 IPR010989 GO:0016020|GO:0016192
Blo09g00464 310 SMART tSNARE_6 195 262 IPR000727 -
Blo09g00464 310 Coils Coil 30 64 - -
Blo09g00464 310 MobiDBLite consensus disorder prediction 1 23 - -
Blo09g00464 310 Pfam SNARE domain 236 288 IPR000727 -
Blo09g00464 310 ProSitePatterns Syntaxin / epimorphin family signature. 206 245 IPR006012 GO:0005484|GO:0006886|GO:0016020
Blo09g00464 310 PANTHER BNAA05G27280D PROTEIN 9 294 - -
Blo09g00464 310 Coils Coil 200 220 - -
Blo09g00464 310 Gene3D - 196 293 - -
Blo09g00464 310 Pfam Syntaxin 32 235 IPR006011 GO:0016020
Blo09g00464 310 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 200 262 IPR000727 -
Blo09g00464 310 SMART SynN_4 25 151 IPR006011 GO:0016020
Blo09g00464 310 Coils Coil 125 145 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00464 Blo-Chr9:15786007 Blo14g00365 Blo-Chr14:3972538 4.30E-124 dispersed
Blo12g00540 Blo-Chr12:23357511 Blo09g00464 Blo-Chr9:15786007 3.18E-144 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00464 K08486 - csv:101208931 461.84