Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00467 ATGCACAAAGCTCCCCTTCCACCAACCACAATCGACGACGAACAACGAGAGGAAGGAGTCCTCTCATCGCGAAGCAGAGAGGAGACACAATGCCATTCTCACGCGAAGAAGGAGAAGACCCGAGAAGAAGAAGAAGGTGAATTTTTAACTGATGAAGAATCAGGGCTAATCGAGAATATTCTAGAGGCAGACGAGCATATAGAGGAAGACATTGTCAGTGAAGTGAATTCCGGCGACCTATTTTTCTCCGTAGCACAATCAATGGCGACGTACTTTCAGGTTAATCCAGATATTCAAGCTTCTGATGGATTACAGACGCTCGTACTTATGAATCCCGGCTACGTACAGTTCTCCGATGCCCTTCCACCGCCTTCGACCAACCTTTTATTCCTCAATTCCCTGGCCGGCAATTCTCTAGCTTCTCAGAATCTCCACCACGCGCCGCCATCTCATTCCCCGCATTTCTCAGGCATGCCTTTGCCGGTTTCCCTTCCCCCGGGCTCACAGGACCCTAATTCTCATCCGCCGCATCCCCACCATATCTCCGCGATGAATGGATTTATCCCCGGAGCTAAATTCAATCATTGGAATCCGATCAATTCCTCCTCCGACGCGCGTGAATCCCAACGCGCTAACCAAGGGCTTTCCCTCAGCCTCTCCTCTCAGCAGCCTGGTTTTGGGTTACTCCGAGCCGAACGAGATGCATCATCTCCAACTCAGCTCGCAGGCGAGGAGATTCGAGTCTCCGGCGGATCATCCTCTATTTCCGGTAACACCAACGGCGGCGTTTCAGGTTTACACGGTGTGTTGCTTTGCTCAAAGTACTTGAAAGCGGCTCAGGAACTTCTCGACGAGGTCGTAAACGTCAGCACCGACGGAATCAGGAACGAGCCAACTAAAAAACCCACCGGGACAAAGATCACCGACGAGTCCTCCGGGACGGCAACCGAAGACGCCTCCGTCAGAATCGACCCAGCCGGGAAGGAAAGTTCAGAGCTCACGACGGCTGAAAGACAGGAAATTCAGATGAAGAAAGCTAAACTCATAACCATGCTTGATGAGGTGGAGCAAAGATACCGACAATATCATCATCAGATGCAGATCGTAATATCATCATTCGAACAATCGACTGGAATTGGGTCGGCAAGAACGTACACTTCCCTCGCCCTCGAGACGATTTCGAAGCAATTCCGGTGCTTGAAAGACACGATTTCCGGCCAAATCAAGGTGGCAAACAAGAGTTTAGGGGAAGAAGATTGGGAGGGTGGTAAAATTGGAAGTTCAAGGCTGAAATTTGTGGATCATCAGCTTAGACAGCAGAGAGCTCTTCAGCAATTGGGAATGATCCAGCAAAATGCTTGGAGACCCCAAAGAGGTCTTCCCGAACGCTCTGTTTCGGTGCTTCGCGCTTGGCTTTTCGAACACTTTCTCCATCCTTATCCTAAGGATTCGGATAAGCAAATGTTGGCCAAGCAAACCGGGCTTACGAGGAGCCAGGTTTCGAATTGGTTTATAAACGCTCGAGTTCGGCTGTGGAAGCCGATGGTGGAAGAAATGTACAAGGAGGAAACCAAGGACCAAGAACAGAATGGCTCTGCAGATAACATGAGCATGATCAATGAAAGTTCTCCTCCCAACTCCATTTCTCCAAGAGAACAAGCGCCTCCAATAAAAAATCCAGAGGGTCATTCGACAAAGACGGCCTCTAAATCCGCCATCAGAGGAAATATTCAAAACTCGTCTGGATCGAGGCTTCTCGGATCGTCAAAGCTCGAAGATATCACACATGGATCAAGTCCGAAAAAACAAAGACACTCGGAAATGGCAATGCATTCTTCACCGAATGTAATCTCGTCCATTAACATCGACGGGAAGCAAGCTCAATCAAACCCGACGAACATTTCAATGAAAGTAGGCAATGAGAAGCAAAGCCGAGACGAATACTCATTCGTGATGAACCAAGCCAATTTCGCAGGCGGATTCGGAGAATACCCGATCGGACGAATCGACCGATACGATAACGAGCAATTCCCGCCTCGTTTTTCCACCAATGGTGTCTCGTTAACGCTCGGGCTCCCCCACCATAACTTTCTTCCCAACCAATCGATCCACGTTGGAAGACGGATTGAAATTGGCGAACCAAACGAGTTTTCCGGGATGAATTCTTCGACTCCTCATTCTGCCACGACTTTTGATAACATTGATATTCAGAACAGAAAGCAATTTGTTGCACAATTGTTGCCGGATTTCGTGGTCTGA 2259 48.87 MHKAPLPPTTIDDEQREEGVLSSRSREETQCHSHAKKEKTREEEEGEFLTDEESGLIENILEADEHIEEDIVSEVNSGDLFFSVAQSMATYFQVNPDIQASDGLQTLVLMNPGYVQFSDALPPPSTNLLFLNSLAGNSLASQNLHHAPPSHSPHFSGMPLPVSLPPGSQDPNSHPPHPHHISAMNGFIPGAKFNHWNPINSSSDARESQRANQGLSLSLSSQQPGFGLLRAERDASSPTQLAGEEIRVSGGSSSISGNTNGGVSGLHGVLLCSKYLKAAQELLDEVVNVSTDGIRNEPTKKPTGTKITDESSGTATEDASVRIDPAGKESSELTTAERQEIQMKKAKLITMLDEVEQRYRQYHHQMQIVISSFEQSTGIGSARTYTSLALETISKQFRCLKDTISGQIKVANKSLGEEDWEGGKIGSSRLKFVDHQLRQQRALQQLGMIQQNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYKEETKDQEQNGSADNMSMINESSPPNSISPREQAPPIKNPEGHSTKTASKSAIRGNIQNSSGSRLLGSSKLEDITHGSSPKKQRHSEMAMHSSPNVISSINIDGKQAQSNPTNISMKVGNEKQSRDEYSFVMNQANFAGGFGEYPIGRIDRYDNEQFPPRFSTNGVSLTLGLPHHNFLPNQSIHVGRRIEIGEPNEFSGMNSSTPHSATTFDNIDIQNRKQFVAQLLPDFVV 752
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15843844 15853557 - BLOR21382 Blo09g00467 65094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00467 752 CDD homeodomain 454 515 IPR001356 GO:0003677
Blo09g00467 752 MobiDBLite consensus disorder prediction 560 594 - -
Blo09g00467 752 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 94 717 - -
Blo09g00467 752 SMART HOX_1 454 518 IPR001356 GO:0003677
Blo09g00467 752 SUPERFAMILY Homeodomain-like 455 520 IPR009057 -
Blo09g00467 752 SMART prehox3 264 406 IPR006563 -
Blo09g00467 752 MobiDBLite consensus disorder prediction 142 184 - -
Blo09g00467 752 Pfam Associated with HOX 269 405 IPR006563 -
Blo09g00467 752 Coils Coil 338 358 - -
Blo09g00467 752 Pfam Homeobox KN domain 471 510 IPR008422 GO:0003677|GO:0006355
Blo09g00467 752 MobiDBLite consensus disorder prediction 198 221 - -
Blo09g00467 752 ProSiteProfiles 'Homeobox' domain profile. 451 514 IPR001356 GO:0003677
Blo09g00467 752 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 94 717 - -
Blo09g00467 752 MobiDBLite consensus disorder prediction 234 257 - -
Blo09g00467 752 MobiDBLite consensus disorder prediction 294 319 - -
Blo09g00467 752 MobiDBLite consensus disorder prediction 521 609 - -
Blo09g00467 752 MobiDBLite consensus disorder prediction 1 53 - -
Blo09g00467 752 MobiDBLite consensus disorder prediction 242 257 - -
Blo09g00467 752 MobiDBLite consensus disorder prediction 1 44 - -
Blo09g00467 752 Gene3D - 457 535 - -
Blo09g00467 752 MobiDBLite consensus disorder prediction 530 548 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo09g00467 Blo12g00539 CCT
Blo01g01247 Blo09g00467 CCT
Blo07g01167 Blo09g00467 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00247 Blo-Chr9:11077374 Blo09g00467 Blo-Chr9:15843844 3.70E-67 dispersed
Blo09g00467 Blo-Chr9:15843844 Blo12g00899 Blo-Chr12:27179806 8.71E-81 dispersed
Blo17g00292 Blo-Chr17:3076413 Blo09g00467 Blo-Chr9:15843844 5.74E-47 dispersed
Blo01g01247 Blo-Chr1:47397235 Blo09g00467 Blo-Chr9:15843844 0 wgd
Blo12g00539 Blo-Chr12:23334895 Blo09g00467 Blo-Chr9:15843844 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12785 PF07526 POX 9.30E-47 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00467 - - qsu:112031679 745.347