Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00514 ATGTATTTTTCACAGTCGAGTGTAGGGGCCGGTGGCAGTAGTAATGGCTCTGAAGGCGGCACTAAGAGTAACAGAAATGTAACCGGTCGACACCCAGTTTATAAAGGGGTGAGACGCCGGAGCACCGGAAAATGGGTGTCGGAGATAAGAGAGCCGCGAAAACCGACTAGGATTTGGTTAGGTACATTTGCTTCTCCGGAAATGGCGGCGGTTGCCTATGATGTGGCGGCGCTGGCTCTCAAGGGTCAAGACGCCGAGCTTAACTTCCCCAACTCAGCGTCTTCGCTGCCGATGCCGGCATCCACGTCGCCGCCGGATATTCAAGCGGCGGCTGCTTCTGCCGCCTCCGCACTAGGAGCTGCAGCTGCTGCAATGGAAGCTGGAAAGTTTACCTCATCGGACGTAGGAGAACAGACGATAGGGATAGAAAGATCATCGCCAATGGTCTCTGAGTTTATGGATGAAGATTTAATCTTTGATATGCCTAACGTTATAATGAACATGGCGGAAGGAATGCTTCTAAGCCCACCTCGTCTGAACACTGCCGGAGACCATACTCCGTCCGGCGAAGACTACGGAGACCATTCCCTCTGGAAGTTTCCATAG 606 52.81 MYFSQSSVGAGGSSNGSEGGTKSNRNVTGRHPVYKGVRRRSTGKWVSEIREPRKPTRIWLGTFASPEMAAVAYDVAALALKGQDAELNFPNSASSLPMPASTSPPDIQAAAASAASALGAAAAAMEAGKFTSSDVGEQTIGIERSSPMVSEFMDEDLIFDMPNVIMNMAEGMLLSPPRLNTAGDHTPSGEDYGDHSLWKFP 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16302623 16303228 - BLOR21429 Blo09g00514 65141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00514 201 CDD AP2 34 92 IPR001471 GO:0003700|GO:0006355
Blo09g00514 201 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Blo09g00514 201 PRINTS Ethylene responsive element binding protein signature 72 92 IPR001471 GO:0003700|GO:0006355
Blo09g00514 201 MobiDBLite consensus disorder prediction 1 42 - -
Blo09g00514 201 SUPERFAMILY DNA-binding domain 33 92 IPR016177 GO:0003677
Blo09g00514 201 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Blo09g00514 201 Pfam AP2 domain 32 82 IPR001471 GO:0003700|GO:0006355
Blo09g00514 201 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Blo09g00514 201 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 15 201 - -
Blo09g00514 201 MobiDBLite consensus disorder prediction 1 28 - -
Blo09g00514 201 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 15 201 - -
Blo09g00514 201 MobiDBLite consensus disorder prediction 178 201 - -
Blo09g00514 201 Gene3D AP2/ERF domain 33 91 IPR036955 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo09g00514 Blo12g00499 CCT
Blo09g00514 Blo12g00499 ECH
Blo07g01353 Blo09g00514 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00193 Blo-Chr3:4606548 Blo09g00514 Blo-Chr9:16302623 3.71E-49 dispersed
Blo06g01111 Blo-Chr6:34529809 Blo09g00514 Blo-Chr9:16302623 5.89E-48 dispersed
Blo09g00514 Blo-Chr9:16302623 Blo15g00153 Blo-Chr15:1552776 2.64E-41 dispersed
Blo12g00499 Blo-Chr12:22835745 Blo09g00514 Blo-Chr9:16302623 1.14E-78 transposed
Blo07g01353 Blo-Chr7:33666977 Blo09g00514 Blo-Chr9:16302623 5.23E-91 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12790 PF00847 AP2 1.60E-12 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00514 - - qsu:112027537 228.409