Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo09g00514 | ATGTATTTTTCACAGTCGAGTGTAGGGGCCGGTGGCAGTAGTAATGGCTCTGAAGGCGGCACTAAGAGTAACAGAAATGTAACCGGTCGACACCCAGTTTATAAAGGGGTGAGACGCCGGAGCACCGGAAAATGGGTGTCGGAGATAAGAGAGCCGCGAAAACCGACTAGGATTTGGTTAGGTACATTTGCTTCTCCGGAAATGGCGGCGGTTGCCTATGATGTGGCGGCGCTGGCTCTCAAGGGTCAAGACGCCGAGCTTAACTTCCCCAACTCAGCGTCTTCGCTGCCGATGCCGGCATCCACGTCGCCGCCGGATATTCAAGCGGCGGCTGCTTCTGCCGCCTCCGCACTAGGAGCTGCAGCTGCTGCAATGGAAGCTGGAAAGTTTACCTCATCGGACGTAGGAGAACAGACGATAGGGATAGAAAGATCATCGCCAATGGTCTCTGAGTTTATGGATGAAGATTTAATCTTTGATATGCCTAACGTTATAATGAACATGGCGGAAGGAATGCTTCTAAGCCCACCTCGTCTGAACACTGCCGGAGACCATACTCCGTCCGGCGAAGACTACGGAGACCATTCCCTCTGGAAGTTTCCATAG | 606 | 52.81 | MYFSQSSVGAGGSSNGSEGGTKSNRNVTGRHPVYKGVRRRSTGKWVSEIREPRKPTRIWLGTFASPEMAAVAYDVAALALKGQDAELNFPNSASSLPMPASTSPPDIQAAAASAASALGAAAAAMEAGKFTSSDVGEQTIGIERSSPMVSEFMDEDLIFDMPNVIMNMAEGMLLSPPRLNTAGDHTPSGEDYGDHSLWKFP | 201 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 16302623 | 16303228 | - | BLOR21429 | Blo09g00514 | 65141 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo09g00514 | 201 | CDD | AP2 | 34 | 92 | IPR001471 | GO:0003700|GO:0006355 | |
Blo09g00514 | 201 | PRINTS | Ethylene responsive element binding protein signature | 34 | 45 | IPR001471 | GO:0003700|GO:0006355 | |
Blo09g00514 | 201 | PRINTS | Ethylene responsive element binding protein signature | 72 | 92 | IPR001471 | GO:0003700|GO:0006355 | |
Blo09g00514 | 201 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Blo09g00514 | 201 | SUPERFAMILY | DNA-binding domain | 33 | 92 | IPR016177 | GO:0003677 | |
Blo09g00514 | 201 | SMART | rav1_2 | 33 | 96 | IPR001471 | GO:0003700|GO:0006355 | |
Blo09g00514 | 201 | Pfam | AP2 domain | 32 | 82 | IPR001471 | GO:0003700|GO:0006355 | |
Blo09g00514 | 201 | ProSiteProfiles | AP2/ERF domain profile. | 33 | 90 | IPR001471 | GO:0003700|GO:0006355 | |
Blo09g00514 | 201 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 15 | 201 | - | - | |
Blo09g00514 | 201 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Blo09g00514 | 201 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 | 15 | 201 | - | - | |
Blo09g00514 | 201 | MobiDBLite | consensus disorder prediction | 178 | 201 | - | - | |
Blo09g00514 | 201 | Gene3D | AP2/ERF domain | 33 | 91 | IPR036955 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo09g00514 | Blo12g00499 | CCT | |
Blo09g00514 | Blo12g00499 | ECH | |
Blo07g01353 | Blo09g00514 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g00193 | Blo-Chr3:4606548 | Blo09g00514 | Blo-Chr9:16302623 | 3.71E-49 | dispersed | |
Blo06g01111 | Blo-Chr6:34529809 | Blo09g00514 | Blo-Chr9:16302623 | 5.89E-48 | dispersed | |
Blo09g00514 | Blo-Chr9:16302623 | Blo15g00153 | Blo-Chr15:1552776 | 2.64E-41 | dispersed | |
Blo12g00499 | Blo-Chr12:22835745 | Blo09g00514 | Blo-Chr9:16302623 | 1.14E-78 | transposed | |
Blo07g01353 | Blo-Chr7:33666977 | Blo09g00514 | Blo-Chr9:16302623 | 5.23E-91 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12790 | PF00847 | AP2 | 1.60E-12 | CL0081 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo09g00514 | - | - | qsu:112027537 | 228.409 |