Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00515 ATGGAAGATCAGTACTCTATGGCCGATCTTAGGCAGCTTATGAATGGAGGGAGGTCCCATTTCCCTCCGGCTATTTCTCAGCACATTGAGATTTTTCCGGGCTACAGGAATCTCCCGCCACTGTCGGGACAACTTCACCACCACCACCAACTTCATCAGTACGACCTGATGATTCCGGGAAGTCAAGCTTCTGATATGATGACGGAGTTTAGGTCTGATTCTTCGATGGGTTGTGCTCAAGTGCGTGGCGCAGCAACTGCGACCGCCGCTTCGGCGGCTACTTTAAGCAGCGGATTTGAAGTGGAAGCTGCGAGCTATGGCGGTGATGGAGGGTCTGGAAGATGGCCGAGGCAAGAGACGCTTACCCTTTTGGAGATCAGATCTCGTCTGGATTCTAAGTTCAAAGAAGCTAATCAAAAAGGCCCTCTATGGGATGAAATCTCCAGGATAATGTCTGAAGAATATGGGTATCAAAGAAGTGGGAAGAAATGCAGGGAAAAGTTCGATAATTTGTACAAATATTACAAGAAGACAAAGGAAGGCAAAGCTGGGAGACAAGATGGGAAACACTACAGGTTCTTTCGTCAACTTGAAGCTCTATATGGGGAGACCAGCAATGGAGTTTCAGTTTCAGAAACAAATTTAGTTGGAGATAATGGTGTAAGATTCCATGGCGGAACAGCTCAAGCTAATCAGGAATCCACCTATCAGTTTAAGAAACACAGCGAGAGCCTCAGTCTGTCTAATTCTTCAGAGTTTGATTCCTCTTCCTCGGACGGAGCTTATGGCGTCCAAGTTGCAGGAGTAATGGAGAACGAGGGTTGGGAAAAGAGGAGGAAGAGGAGAGGAGGGAAATGCTGGAAGGCGAAGATAAAAAAGTTTATCAATTCACAGATGAGAAAGCTGATAGAGAAGCAAGAAGAATGGTTAGATAAGTTAATGAAGAGCCTTGAGCAGAAGGAGAAAGAGAGGATAATAAAAGAGGAAGAATGGAAGAAAAATGAAGTGTCAAGGATTGAGAGAGAACATAGATTTTGGGCAAGGGAGAGAGCTTGGATCGAAGCTCGAGATTCGGCTTTCATTGAGGTCTTCCAAAAGTTAACCGGAGGAGAAGTGATTAGGTCTTCTCTGATCGCCGAAGACCGCAACGAAGACTTAATCGAGATTATGAACAACAATGGAGGTCTAAAAGAGAATGATCCTTGGAGGGAGAAGTATGCGAAGAAGGAGAGCAACAACAAGAAACGCAAAGAGAATTCGATAAACTTCGATTATTTACGAAGTGAATCCTTCGGATATGATCAAGAAGGAACAACCTGCGGAGAAATCAACGAGGAAGCGATCGAAATGTCGACAAGAGCCGACACCATTGAAGGGTCTTCACCTAATCATGATGCAAATGCAAATGTTATCTCTGACTCAGAAAGCACCGAGGAGGCTCCTCATGGTTTCACTGGCGAGGCTATACCCAAAGCCAAGGAAGTCGTGAGGATTGATGTTGTCGGAGGCTTCGCTCTACAGAAGGTGACCCCGGAAAGAAGTTACTTCCGGACTATCGCGAGAGTGGATATGAAGTTGGATTTTGTCCCGCCAGTTCTCATAAACTTTTTATCGAGGCAGATTCTTGGTTCCAGTTTCAGATTATATCGAAAGGTAGTGACTACCAAGTTCAAAACTGATGGAGATTTGACCAAGGCCTTGAGAGACCCACTTTACGATCGAATTCGTGAATCTATTTGTGGCAAGAACGAGCAAGAAAACTCGCTTGAAGAAAAAGAGATGACTGGTGACAGATCTGATCTCTGTGTGGAGAATCTTTTGGAGATGAAAAAGGATGAGTTGATTGGGGAGATTGAAGAGGAAGAGGGAGAAGAAAGCCAGCAAGCTCAAATTGCTACTCTCGATTCTCCGGGCAAGCTATCAACTATGTCGAGCTCAAAGCTGCGAACTTCCCTCTCCGCAATTTTGCGTGGAAAGCCGCGATTTACTAGTTCTTGTTTCTTCTCAACAGATTCGTATTCAGTTTCTCTAATTCGTTCTTCGCCAATTTCCGGCTCGGCCTCGTCTCCTGCTTTCATTGGTGTTTTACATTCTCGATCAATAAGAGATTCTGAAAATGAAATTCTGGGAGGTGCTTGGTTTTTTCGGAGAGGTTTCTGCTCCCAATCGGCGGCGGAAATCGAGGGCACGGGAAAATGCTGGAATTGCGGTGCTGTGGCCCATACGCGGCCTTTTCTGGTGTGCGATTCATGTCGCACCATTCAGCCGGTGGATCATTCTGTGGATTACTTTCAGATATTTGATCTGGATAAGAAGTATGAAATTGGGGATGTCAATCTGGAGGGAAAGTACAAAGACTGGCAGAAAAAGTTGCACCCTGATTTAGTTCATTCAAAATCAGAGGAAGAAAGAGAATATGCTGCTGAACAGTCTGCCCGGGTGATTGATGCCTATCACACTTTAAGCAAACCTTTGTCAAGGGCAATATATGTTCTTCAGTCAGAGGGTATAGATGTTAATGAAGAAGAAACAATTTCAGAAATGGATTTGCTATCAGAGATAATGGAAATCAGGGAAGCTGTTGAAGAGGCATCAGATTCACAAGCTTTAAATGAGATTCAGCTGAAGATGAACCAGAAACTGAAACATTGGTCGGACAAATTCGCAAATTCGTTTCAGAACCGGAATTTCGTGGAAGCTCAAACTTCGATCCGAAGAATGAGGTACTATGAACGAGTAAGTGAAGAAATCACGAAGAAGCTGTGA 2766 44.5 MEDQYSMADLRQLMNGGRSHFPPAISQHIEIFPGYRNLPPLSGQLHHHHQLHQYDLMIPGSQASDMMTEFRSDSSMGCAQVRGAATATAASAATLSSGFEVEAASYGGDGGSGRWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEISRIMSEEYGYQRSGKKCREKFDNLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGETSNGVSVSETNLVGDNGVRFHGGTAQANQESTYQFKKHSESLSLSNSSEFDSSSSDGAYGVQVAGVMENEGWEKRRKRRGGKCWKAKIKKFINSQMRKLIEKQEEWLDKLMKSLEQKEKERIIKEEEWKKNEVSRIEREHRFWARERAWIEARDSAFIEVFQKLTGGEVIRSSLIAEDRNEDLIEIMNNNGGLKENDPWREKYAKKESNNKKRKENSINFDYLRSESFGYDQEGTTCGEINEEAIEMSTRADTIEGSSPNHDANANVISDSESTEEAPHGFTGEAIPKAKEVVRIDVVGGFALQKVTPERSYFRTIARVDMKLDFVPPVLINFLSRQILGSSFRLYRKVVTTKFKTDGDLTKALRDPLYDRIRESICGKNEQENSLEEKEMTGDRSDLCVENLLEMKKDELIGEIEEEEGEESQQAQIATLDSPGKLSTMSSSKLRTSLSAILRGKPRFTSSCFFSTDSYSVSLIRSSPISGSASSPAFIGVLHSRSIRDSENEILGGAWFFRRGFCSQSAAEIEGTGKCWNCGAVAHTRPFLVCDSCRTIQPVDHSVDYFQIFDLDKKYEIGDVNLEGKYKDWQKKLHPDLVHSKSEEEREYAAEQSARVIDAYHTLSKPLSRAIYVLQSEGIDVNEEETISEMDLLSEIMEIREAVEEASDSQALNEIQLKMNQKLKHWSDKFANSFQNRNFVEAQTSIRRMRYYERVSEEITKKL 921
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16319241 16328054 + BLOR21430 Blo09g00515 65142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00515 921 Coils Coil 604 624 - -
Blo09g00515 921 Gene3D - 457 559 IPR023393 -
Blo09g00515 921 TIGRFAM hscB: Fe-S protein assembly co-chaperone HscB 773 919 IPR004640 GO:0001671|GO:0044571|GO:0051087
Blo09g00515 921 Pfam HSCB C-terminal oligomerisation domain 848 917 IPR009073 GO:0051259
Blo09g00515 921 SMART dnaj_3 761 826 IPR001623 -
Blo09g00515 921 Gene3D DnaJ domain 722 833 IPR036869 -
Blo09g00515 921 Pfam Myb/SANT-like DNA-binding domain 114 200 IPR044822 -
Blo09g00515 921 SUPERFAMILY Chaperone J-domain 761 832 IPR036869 -
Blo09g00515 921 SUPERFAMILY HSC20 (HSCB), C-terminal oligomerisation domain 839 920 IPR036386 GO:0051259
Blo09g00515 921 Gene3D - 840 921 IPR036386 GO:0051259
Blo09g00515 921 ProSiteProfiles Myb-like domain profile. 113 172 IPR001005 -
Blo09g00515 921 ProSiteProfiles dnaJ domain profile. 762 834 IPR001623 -
Blo09g00515 921 CDD GT1 114 179 - -
Blo09g00515 921 Gene3D - 115 177 - -
Blo09g00515 921 Coils Coil 303 330 - -
Blo09g00515 921 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 31 390 - -
Blo09g00515 921 PANTHER - 31 390 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01204 Blo09g00515 CCT
Blo07g01354 Blo09g00515 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00515 Blo-Chr9:16319241 Blo12g00500 Blo-Chr12:22857666 4.04E-129 dispersed
Blo01g01204 Blo-Chr1:45210652 Blo09g00515 Blo-Chr9:16319241 2.35E-101 wgd
Blo07g01354 Blo-Chr7:33679868 Blo09g00515 Blo-Chr9:16319241 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12791 PF13837 Myb_DNA-bind_4 2.60E-19 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00515 - - tcc:18598163 416.001