Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00525 ATGGCCGACGGTGTCCTGAACTGCCTACAGCACCGAGGAAACATTCTGAACGGTGGAGATCGTGTTTTGGGCACTGTATCGTTGAGGGGAGCAAGTGCTAAAGAAATTTCAAGGGATGCCTTACTTGAAAAGGTCCTTCAGGAAAGAGAGCACCGACACTATGCGAGAAGAGCTTCGGCTGCTGTTCTCTTTATTCAGAGAGTTTGGAGGCGCTATAAGGTGACCAAAGAGGCTGCTTTTCTGCTTCAAGAAGAATGGGAACAGTTAGTGAATAATACTGAAGGCATCATGACCAGACAAATTATTTCTGAAAAGATTTTGAGGCCATTTCTTTTCTTCATCTCATGCTTATCAACCAGGCTTCATAAGGTGCAGAACAGAGAAATTGAGTGTGCAAAGAATTGCTTTAAAATCCTGTTGGAAAGCATGAGCTCCAGTGAATCAGAGAACAATTTTTGCTCCCTGGCCATGGGTACATCTGAAGAAAGAAGAATTTGGATTTATCAATCACGGAAGTTGATTTCCCTATGCATATTTGTTCTTTCCCAGTTTGACAACTCACGTGCAAATGATCAAGAAATGGTTGCTTTAACTTCTCTAGCAATGCGTCTTGCTGTTGTATTAACTGATACTAAAAGCTGGAAAAACATTATGGACAGAAATCAGGAGTCCGTTGTGGCAGTCAAGAATTTAGTTCGATTTATGGGGAGTGCTGAAAGTGGTCTCTATATTTCAATCAGACAATACATGAATAGATTGAACGTTCATCTGACTTTACAGAACAACTTTGTCCAGACAAATGATGAGCTCTTGATAATTGCAAGTGCAATAACTTTAGCTCTGCGACCATTTCATTTAACATCTTTTGATCTGAATTTACCTGATTCATGGGAAGGGCGTTGTGCTGCTGAACAGTTTTGCTTGCTTGTACTTACGGTTCCTTGGTTTATGCAACGTCTGCCAGCAGTTCTTTTACCAGCTGTGAAGCATAGGTCTATTTTGTTACCGTGCTTGTGGACCATATTGGTTTCAAAAGGTAAAGTTTTACAGGAAATGTCTAAATTGGATCAACCAAGAGTTAGTTCTTGTTCTGAACTTTCTCCATCTGTTGGGTGGGCTCTTGCAAACATTATCTCTCTGGTGACAGGCAGTGAAAATAACTCTATTGATGCTGGATGGTTCCAACAAGGTTTTGACTATGCATTGTATGTCCTTGCAACATTAGCTTTGGCTGAGAACTTTTTAACTGTGCTTAGAGATGTTAGATGTAGTCAAAAGTACAATCAGAATCAATATATTCTGGGTCTTCCTGAAACTTTATCAGACCTTTCTGCTGCAGTTGAACCTGAAAGTGTGACAGGACCCAAGTCATCAACTCTGCCGTACCGTGATATGTTTAGGCCTGTTTTTCAACAGTCACATCTTTCCAATCTTTTGATACTCTTGAATAAAAATATCCCCATTGCGACTGTGACTGCACCTCCAATAAGATTGGAATATTTGCGGAATGTGGAACTGGTTGATATTGTGTATTTTTATTCTTACATGCTACAAATATTATCACTCTTGAACCGTATGGTTGGATCATTACCTATTCTCAATTTGCTATCTTTTACTCCTGGATTTCTTGTTGAGATATGGCAAGTGTTGGAAAGTTACCTTTTTCCTGTTGATGGTGGGAATGCAGAGGATAAATCATCTTGTGCGAGTAAGATATCAAAAAATAAAAAAAATAAGATTCTCGAGAAAAAGCAAAAGCAAAAGCAACCGAGTAAGGATGGAGCTCATAAATGGGTAGCTGCGTTGCATGAATTTACCAGCAAACCACAGGCAGATGGTGATCATATTGATGGAAGGTTAGATGAAGAATCCAGTAATGAATGGGATGTAATATCTTTGAGGCTTGGTCCGGAAGGTCTTTCGCAAGATACATTATGTCTACTCTACCTTTTCAGTGCCACTTATTCTCATCTTCTATTAATTCTAGATGACATAGAGTTCTATGAAAAACAGGTCCCCTTCACGTTGGAACAGCAAAGAAGGATTTCATCTGTGCTCAATACATTAGTGTACAATGGCTTATCTCATGGTATCAGAAAGCAGAACAAACTCATTCTAGATTCTGCTATCAAATGCTTGCTTCTCATGTACGAGAGGGATTGCAGACACCAGTTTTGTTCCAGTGATCTTTGGCTTTCACCTGCTAGGAAAAGCCGCCTCCCTGTGGCTGTCGCAGCTAGAACTCATGAAGTGTTGTCAGCTAATCAAATATCAGACGATTCTTTGACTGTTCCAGCTACAAACTCTGTTATAACAACCATGCCACATGTATTTCCATTCGAGGAAAGAGTTGAAATGTTTAGAGAGTTTGTCAGGAAGGACAAAGTCTCTCGAAAAATGGCTGGGGAAATTTCTGAACCTGGTTCACGATTAGTTGAAATTGTAGTCCGTCGCAGTCATGTTGTTGAAGATGGATTCCGACAATTGAATTCCCTTGGGCCAAGGTTGAAATCGTTTATCCATGTCTCTTTCGTTAGTGAATGTGGCCTTCCTGAAGCTGGTCTTGATTGTGGTGGATTATCTAAGGAGTTTTTAACTGACATAGCCAAAGCAGCTTTTGCCCCTGAGTATGGTCTATTCTCCCAAACTTCTACTTCAGATAGACTTTTGATTCCTAATACATCTGCAAGATATCTTGAAAATGGCATCCAGATGATAGAATTTCTTGGTAGAATTGTTGGTAAAGCTCTATATGAAGGAATATTACTTGATTACTCTTTTTCACATATCTTTGTGCAAAAGCTCTTAGGACGGTATAGCTTTTTGGATGAACTATCTACACTCGATCCAGAGCTCTATAAGAATCTCATGTATGTGAAGCACTATACCGGTGATGTCAAGGAATTATCCCTGGATTTCACTGTTACTGAAGAATCATTTGGAAAATGGCGTGTTATAGATCTTATACATGGTGGCAAGGATATTTCTGTTACAAATGATAACAAGATGCAGTATGTTCATGCAATGGCAGATTATAAACTTAACCGACAGATACTTCCCTTTTCAAATGCATTTTACAGAGGACTAACTGATCTTGTATCACCATCTTGGTTGAAATTATTTAATGCAAATGAATTCAATCAGTTGCTTTCAGGTGGGAAATATGACATTGACGTGGAGGATTTGAGAAATAATACACATTATACTGGTGGCTACACAGAAGGAAGCCGTACTATTAAAATTTTTTGGGAGGTTATTGCAGAATTTGAGCCAAAACAACGTTGTATGCTTCTTAAATTTGTTACAAGTTGTTCTCAAGCTCCTTTACTGGGGTTCAAACACTTGCAACCAACCTTTACCATCCACAAAATTGCTTGTGATGTTCCTATTTGGGCCTCTATCGGAGGGCAGGATGTGGATCGGCTTCCATCAGCTTCCACGTGCTATAATACTCTGAAGCTACCAACCTACAGACGCCCAAGCACCTTGAGAGCCAAGCTTCTGTATGCAATCAATTCCAATTCAGGATTCGAGCTTTCTTGA 3543 39.66 MADGVLNCLQHRGNILNGGDRVLGTVSLRGASAKEISRDALLEKVLQEREHRHYARRASAAVLFIQRVWRRYKVTKEAAFLLQEEWEQLVNNTEGIMTRQIISEKILRPFLFFISCLSTRLHKVQNREIECAKNCFKILLESMSSSESENNFCSLAMGTSEERRIWIYQSRKLISLCIFVLSQFDNSRANDQEMVALTSLAMRLAVVLTDTKSWKNIMDRNQESVVAVKNLVRFMGSAESGLYISIRQYMNRLNVHLTLQNNFVQTNDELLIIASAITLALRPFHLTSFDLNLPDSWEGRCAAEQFCLLVLTVPWFMQRLPAVLLPAVKHRSILLPCLWTILVSKGKVLQEMSKLDQPRVSSCSELSPSVGWALANIISLVTGSENNSIDAGWFQQGFDYALYVLATLALAENFLTVLRDVRCSQKYNQNQYILGLPETLSDLSAAVEPESVTGPKSSTLPYRDMFRPVFQQSHLSNLLILLNKNIPIATVTAPPIRLEYLRNVELVDIVYFYSYMLQILSLLNRMVGSLPILNLLSFTPGFLVEIWQVLESYLFPVDGGNAEDKSSCASKISKNKKNKILEKKQKQKQPSKDGAHKWVAALHEFTSKPQADGDHIDGRLDEESSNEWDVISLRLGPEGLSQDTLCLLYLFSATYSHLLLILDDIEFYEKQVPFTLEQQRRISSVLNTLVYNGLSHGIRKQNKLILDSAIKCLLLMYERDCRHQFCSSDLWLSPARKSRLPVAVAARTHEVLSANQISDDSLTVPATNSVITTMPHVFPFEERVEMFREFVRKDKVSRKMAGEISEPGSRLVEIVVRRSHVVEDGFRQLNSLGPRLKSFIHVSFVSECGLPEAGLDCGGLSKEFLTDIAKAAFAPEYGLFSQTSTSDRLLIPNTSARYLENGIQMIEFLGRIVGKALYEGILLDYSFSHIFVQKLLGRYSFLDELSTLDPELYKNLMYVKHYTGDVKELSLDFTVTEESFGKWRVIDLIHGGKDISVTNDNKMQYVHAMADYKLNRQILPFSNAFYRGLTDLVSPSWLKLFNANEFNQLLSGGKYDIDVEDLRNNTHYTGGYTEGSRTIKIFWEVIAEFEPKQRCMLLKFVTSCSQAPLLGFKHLQPTFTIHKIACDVPIWASIGGQDVDRLPSASTCYNTLKLPTYRRPSTLRAKLLYAINSNSGFELS 1180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16452712 16465700 + BLOR21440 Blo09g00525 65152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00525 1180 CDD HECTc 813 1178 IPR000569 GO:0004842
Blo09g00525 1180 Gene3D Hect, E3 ligase catalytic domain 1055 1179 - -
Blo09g00525 1180 ProSiteProfiles HECT domain profile. 836 1180 IPR000569 GO:0004842
Blo09g00525 1180 Pfam HECT-domain (ubiquitin-transferase) 867 1180 IPR000569 GO:0004842
Blo09g00525 1180 Gene3D Hect, E3 ligase catalytic domains 814 1052 - -
Blo09g00525 1180 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 25 1180 - -
Blo09g00525 1180 SUPERFAMILY Hect, E3 ligase catalytic domain 812 1173 IPR035983 GO:0004842
Blo09g00525 1180 Gene3D Hect, E3 ligase catalytic domain 938 1017 - -
Blo09g00525 1180 SMART hect_3 830 1180 IPR000569 GO:0004842
Blo09g00525 1180 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 25 1180 IPR044611 GO:0000209|GO:0061630
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo09g00525 Blo12g00457 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00043 Blo-Chr1:581043 Blo09g00525 Blo-Chr9:16452712 1.12E-100 dispersed
Blo09g00525 Blo-Chr9:16452712 Blo10g00871 Blo-Chr10:27469448 2.18E-43 dispersed
Blo09g00525 Blo-Chr9:16452712 Blo17g00101 Blo-Chr17:848563 2.09E-40 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00525 K10588 - zju:107432043 1473.37