Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00532 ATGAGAATCAATCCCACCTTCCTTTCCCTTTTCTGGGTCTCAGCCTTAGCCATTGCCGTCCTCTCCATTGCCATCTCCTTTTATTCCTTCTCTTTATCCTCTATTGCCTCTCCTCACAGCTTTAATCTTGCTATTTACCAAGCAGCAGGACTGTTGCATAAAAATAGGGTGGAAGACTTTCTCTCTCTGATAACTCAGAGTCAGACTGTCTCTGCTCGACACCATCACCGGAGAAAGCCCAAAAGAAAATGCGACAAAACAAAGTGGAATTCTCCGATCATATCCGTCTATGAGGTTGCTTCCATCTTTACCGTCGACTTGAAGGGTTGTGCTAATTTTGGCAGCGTCCAGAAGGCAGTAGATGCTGTTCCTGAGTATAGCCATTCTAGGACCCTCATCTTAATAGATTCCGGCACTTACAGGGAGAAAGTGGTGGTGCAGGCTAACAAAACGAACTTAATATTTCAAGGAAAAGGTTATTTAAACACACAAATAACATGGAATGATACTGCAAATTCTACCGGAGGAACCGTTTATAGTTCTTCTGTTGCAGTTTTTGCTCCTAATTTCACTGCATTTAACATTAGCTTTAAGAATACTGCTCCGCCGCCGTTGCCCGGAATAGTTGGAGGCCAAGCAGTGGCACTTCGGATTGCCGGAGACCAATCTGCGTTTTACGGGTGTGGATTTTATGGAGCTCAAGACACTCTAAACGACGATCATGGGAGGCATTACTTCAAACAGTGCTTCATTGAAGGATCCATCGATTTCATTTTTGGAAACGGCAAATCAATCTACGAGGACTGCACCATAAATTCAGTGGCGATACCAGTTTCCGATGGGGTTAGTGGAGCTATTACTGCTCAGGGGAGGCAGTCGATCGGCGAGCAAAGTGGGTTTTCGTTTGTGAACTGCTTTATCAATGGAAGTGGGAAAGTTTGGCTGGGCAGAGCTTGGGGGACGTACGCGACGGTGGTGTTTTCCAACACCTACATGTCGGAGGTTGTTTCTTCCGATGGCTGGAATGACTGGAGAGACCCTTCTAGAGACGAGACGGTGGTGTTCGGAGAGTACGGATGCATCGGACCCGGAGCTAATTACACGTACAGAGTGTCGTATGGAAAGCAGCTGAATCAAACGGAATCAGCTCCTTATCTTGACATTTCTTACATCGACGGCGACGACTGGTTGATTCCTCATCGGAATCTTTCATCTTATTCAATCATTTTCGATACCCACCATCCATTTATGGAGAATCTTCTACGTTCTTTCGATATTTAA 1281 45.43 MRINPTFLSLFWVSALAIAVLSIAISFYSFSLSSIASPHSFNLAIYQAAGLLHKNRVEDFLSLITQSQTVSARHHHRRKPKRKCDKTKWNSPIISVYEVASIFTVDLKGCANFGSVQKAVDAVPEYSHSRTLILIDSGTYREKVVVQANKTNLIFQGKGYLNTQITWNDTANSTGGTVYSSSVAVFAPNFTAFNISFKNTAPPPLPGIVGGQAVALRIAGDQSAFYGCGFYGAQDTLNDDHGRHYFKQCFIEGSIDFIFGNGKSIYEDCTINSVAIPVSDGVSGAITAQGRQSIGEQSGFSFVNCFINGSGKVWLGRAWGTYATVVFSNTYMSEVVSSDGWNDWRDPSRDETVVFGEYGCIGPGANYTYRVSYGKQLNQTESAPYLDISYIDGDDWLIPHRNLSSYSIIFDTHHPFMENLLRSFDI 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16528670 16530461 + BLOR21447 Blo09g00532 65159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00532 426 SUPERFAMILY Pectin lyase-like 99 397 IPR011050 -
Blo09g00532 426 Pfam Pectinesterase 105 393 IPR000070 GO:0030599|GO:0042545
Blo09g00532 426 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 13 404 - -
Blo09g00532 426 PANTHER PECTINESTERASE 14-RELATED 13 404 - -
Blo09g00532 426 ProSitePatterns Pectinesterase signature 2. 251 260 IPR033131 -
Blo09g00532 426 Gene3D - 97 403 IPR012334 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00532 Blo-Chr9:16528670 Blo10g00919 Blo-Chr10:28097722 1.56E-137 dispersed
Blo09g00532 Blo-Chr9:16528670 Blo05g00245 Blo-Chr5:2743288 1.18E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00532 - - jre:109013103 554.288