Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00546 ATGGGAAATGTTTGTTGTAGTCGTCGAAGGAGGCACGGTAGCCGCCGAAGTCACCCCACCCCGCCGCCTCCGGCAGCACCGCAACCAGAAATCACGGCGAACAGGTACGTTTTCGCTGCTGCTACCCCGTACCCGTCTAATTATCAGAACCAACCTCCGTCATATTACCAATATCCAGCCTACTACCCTCCGCCTCCGCCATCAATGCCGATGCCTTTGCCAGCTCCGTATGATCACCACCACGGAGGAGCTCATCCCCACATGGATCCGTCGAATTGGGTCGGCGGGAGATACTCTTGTGGGCCAGTTATGCCTCCGCAGACGCCATATGTCGAGCACCAAAAAGCAGTTATCATCCGAAATGATGTCAACCTGAAGAAGCAAACTTTGAAAATCGAACCGGACGTCCATAATCCGGGGACGTTTCTTGTCACATTTACGTTTGATGCGACGGTCGCCGGAAGCATCACTGTTATGTTCTTTGCAAAAGAAGGGGAAGACTGTAATCTAACACCATTGAAGGAAGACATTCTCAAACCTGTGACAGTAGATTTTGAGAAGGGTATGGGGCAAAAGTTCCGGCAGCCTGCCGGAACGGGGATCGAACTGTCAGCATTTGAGGAAGATTTATTCAATCCTAGTAAGCTTGACGTCTATCCTCTGGCCATAAAAGCAGAGGCTTTTCCGGACAACCAAACCGGAGCTAAGAACTCCCAAATTACGCAGGCAGTGATCGAGAAGGATCGAGGGGAGTACCAGGTGAGAGTTTTGAAGCAGATCCTGTGGGTGAATAATATGAGGTACGAGCTGCAGGAGATATTTGGGATTGGAAATTCAATGGAGGGTGATTTGGATGGAAACGATCCCGGAAAAGAATGCGTCATTTGCTTGTCTGAACCGCGCGATACCACTGTCCTCCCGTGCCGTCACATGAGCCATCATGATATTGATGCTTTGCTCGAAAAATCGAAGAACTTAGATTTGATTTGTTGTATGTGCAACGGCTGTGCGAAGGTTTTGAGGTTCCAGATGAATCGATGCCCCATCTGCCGACAACCCATCGACCGCCTTTTGGAGATCAAGGTCAGTAGCGGATCCGACGAATGA 1107 50.14 MGNVCCSRRRRHGSRRSHPTPPPPAAPQPEITANRYVFAAATPYPSNYQNQPPSYYQYPAYYPPPPPSMPMPLPAPYDHHHGGAHPHMDPSNWVGGRYSCGPVMPPQTPYVEHQKAVIIRNDVNLKKQTLKIEPDVHNPGTFLVTFTFDATVAGSITVMFFAKEGEDCNLTPLKEDILKPVTVDFEKGMGQKFRQPAGTGIELSAFEEDLFNPSKLDVYPLAIKAEAFPDNQTGAKNSQITQAVIEKDRGEYQVRVLKQILWVNNMRYELQEIFGIGNSMEGDLDGNDPGKECVICLSEPRDTTVLPCRHMSHHDIDALLEKSKNLDLICCMCNGCAKVLRFQMNRCPICRQPIDRLLEIKVSSGSDE 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16730366 16732104 + BLOR21461 Blo09g00546 65173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00546 368 MobiDBLite consensus disorder prediction 1 32 - -
Blo09g00546 368 ProSiteProfiles Zinc finger RING-type profile. 293 351 IPR001841 -
Blo09g00546 368 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 277 361 IPR013083 -
Blo09g00546 368 PANTHER MAHOGUNIN 10 368 IPR045194 GO:0061630
Blo09g00546 368 PANTHER RING/U-BOX SUPERFAMILY PROTEIN-RELATED 10 368 - -
Blo09g00546 368 SUPERFAMILY RING/U-box 292 357 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo07g01402 Blo09g00546 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01402 Blo-Chr7:34075054 Blo09g00546 Blo-Chr9:16730366 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00546 - - csv:101216150 484.567