Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00550 ATGGGAAGGAAGGGAAACTGGTTTTCTTCTGTAAAGAAAGCTCTCAGCCCTGAGAAGAAAGATCAGCTTCAATTATTCCAAAATTCCAAGTGGAAGAAGAAATGGTTCGGAAAACAAAAGCTGTCCGATCCAGAATCTGCACCCCCGGAAAATGTCACCGCCCCTCCTCCTCCTCCTCCTCCTCCCCTGGTGGAAGATGTGAAATTAAGAAATGTTGTCGACGAAGAGAGTGATCGTGCTTGCTCTGTTGAAGTTCCTACTCCAACAGTGACAACCTCAGCTGCCGAAGCCCAAGTTGTTGCCACTGAGGATGTTCCAGACATTATCCAGCCTGCCCCGGAAGCTCAATTTATCGGAAAATCGAGGGAAGAAGTGGCGGCAATCAAGATCCAAACGGCATTTCGAGGATATCTGGCAAGAAGAGCATTGCGGGCTTTAAGAGGGTTGGTGAGGCTTAAAACACTGATGGAAGGTTCGGTCGTGAAGCGCCAAACTGCAAATACTCTTCGATGCATGCAAACCCTTTCTCGAGTTCAGTCTCAAATCCGTTTCAGGAGGATCCAGATGCTAGAAGAGAATCAAGCTCTTCAAAAGCAACTTCTTCAAAAACACGCCAAAGAGCTCGAGAATTTTCGGATGGGGGAGGAATGGGATGACAGCTTGCAGTCAAAGGAGCAAATTGAAGCTAATCTACTAAGCAAATATGAGGCTGCTATGAGAAGAGAGAGAGCATTGGCTTATTCATTCTCCCATCAGCAAACCTGGAAAAATTCTTCAAGATCTGTAAATCCAATGTTTATGGATCCAAGCAATCCCACCTGGGGTTGGAGCTGGTTAGAACGATGGACGGCAGCGCGGCCATGGGAGAGTCGGACAGAAAAGGAGCAGAATAACGAAAACTCATCTGTAAAGAGCGGAAGGCGTGGCATTTCTGCGGGAGAAATAAGCAAGGCTTATACTAAATACCAACTAAATGCCGAGACAAACTCCCCGACGGCTAGTGTAAAGGCAAACAATTCAACTTTCGAGTCCCCTTCGACTCCTTCCAAGCCTGCATTGCCTGCATCGACTAGAAAAATGAAGCCCCCCAGCCCAAGAAGGAGCTTGGGTCTAGAAGATGACACGAAGAGCATAGCTAGTTTGCAGTCAGAACGGGGTCGGAGGCATAGCATGGGTGCGGGATCAGTGAGGGACGATGAGAGCATAGCTAGCTCCACGGCAGTGCCTAGCTACATGACCCCAACCGAATCTGCAAGAGCCAAATCCAAATCGCAAAGCCCTTTCGCGATAGACAAGGCCGAAACGGCAGAAAAAGGATCACCAATCCCCACTAAGAAGCGACTTTCATTTACGACTTCGCCTGCCCTCCCAAGGCGGCACTCGGGTCCGCCCAAGATCGAAAGCAGCTTCAATTCAGAAGCCCAAGTAAGCAACGGTGTAACCGCGTAA 1449 48.79 MGRKGNWFSSVKKALSPEKKDQLQLFQNSKWKKKWFGKQKLSDPESAPPENVTAPPPPPPPPLVEDVKLRNVVDEESDRACSVEVPTPTVTTSAAEAQVVATEDVPDIIQPAPEAQFIGKSREEVAAIKIQTAFRGYLARRALRALRGLVRLKTLMEGSVVKRQTANTLRCMQTLSRVQSQIRFRRIQMLEENQALQKQLLQKHAKELENFRMGEEWDDSLQSKEQIEANLLSKYEAAMRRERALAYSFSHQQTWKNSSRSVNPMFMDPSNPTWGWSWLERWTAARPWESRTEKEQNNENSSVKSGRRGISAGEISKAYTKYQLNAETNSPTASVKANNSTFESPSTPSKPALPASTRKMKPPSPRRSLGLEDDTKSIASLQSERGRRHSMGAGSVRDDESIASSTAVPSYMTPTESARAKSKSQSPFAIDKAETAEKGSPIPTKKRLSFTTSPALPRRHSGPPKIESSFNSEAQVSNGVTA 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16793475 16795520 + BLOR21465 Blo09g00550 65177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00550 482 MobiDBLite consensus disorder prediction 328 353 - -
Blo09g00550 482 MobiDBLite consensus disorder prediction 365 383 - -
Blo09g00550 482 ProSiteProfiles IQ motif profile. 123 151 IPR000048 GO:0005515
Blo09g00550 482 MobiDBLite consensus disorder prediction 49 63 - -
Blo09g00550 482 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 478 - -
Blo09g00550 482 Gene3D iswi atpase 120 159 - -
Blo09g00550 482 SMART iq_5 122 144 IPR000048 GO:0005515
Blo09g00550 482 MobiDBLite consensus disorder prediction 399 424 - -
Blo09g00550 482 Pfam IQ calmodulin-binding motif 126 144 IPR000048 GO:0005515
Blo09g00550 482 MobiDBLite consensus disorder prediction 465 482 - -
Blo09g00550 482 MobiDBLite consensus disorder prediction 1 22 - -
Blo09g00550 482 MobiDBLite consensus disorder prediction 34 63 - -
Blo09g00550 482 MobiDBLite consensus disorder prediction 288 309 - -
Blo09g00550 482 MobiDBLite consensus disorder prediction 328 482 - -
Blo09g00550 482 PANTHER IQ-DOMAIN 5-RELATED 1 478 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo07g01409 Blo09g00550 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00550 Blo-Chr9:16793475 Blo13g00730 Blo-Chr13:30127523 2.63E-139 dispersed
Blo12g00275 Blo-Chr12:16552268 Blo09g00550 Blo-Chr9:16793475 4.79E-31 dispersed
Blo09g00025 Blo-Chr9:290840 Blo09g00550 Blo-Chr9:16793475 1.73E-33 transposed
Blo16g00006 Blo-Chr16:433825 Blo09g00550 Blo-Chr9:16793475 1.04E-32 transposed
Blo07g01409 Blo-Chr7:34116855 Blo09g00550 Blo-Chr9:16793475 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00550 - - qsu:111993140 536.954