Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo09g00553 ATGTATGCCTCGCAGGGAGGGATCTTCGGCATTGAATATGAGGACGCAGGTTTCACCGTGAACGGGAAACTATTGGACCTGTACTTTCCCCATACTCTGTTCACGGTTGAAAATACCTGGCTCAATCTCATTTCTCAGTTCATTTCCTTCTTTTCTTCTCCAACAGGACGAAGCTTTTCTTCTCAGGTCAAGGAAGGTGATGATGGCATCTTCATTTTGTCGATTGATTTCCAACAATTTCAGAAAATATATGATATTCCTATATTTTATACAATGTTGGAGGATGCACCTAAAATTGCCCTTAAATGTATGTGTGCCGCACTTCACCAGGTTTTGTTGATGGAAACAGAAAACAATTTAGAAGACGTTGCAAGAATTGTAATCAGGCCACACAATTGCCCTAAATCTATGGTCTCTCTTAAGAACTTAAAAGCAGCTTACATTGATAAGTTTGTATCTATTCGTGGTACTGTGGTCAAAGCTAGCACTGTCAGGCCTCTAGTAATACAGATGAGTTTTTCTTGCTCAAAGTGTAAAACCAACATTACACGAAACTTTCCTGATGGAAAGTTTTCACCTCCATCAATTTGTGAGTTGGATGGATGCAAAAGCAAAACTTTTAATCCAATTCGATCTACTTCTCAAGCTATAGATTTTCAGAAAATAAGATTACAGGAAGTTCTAAAGTCAGAAGATCATGAAGAAGGCAGGGTGCCACGAACAGTAGAGTGTGAACTGACTGAAGATCTTGTTGATGCGTGCATCCCTGGAGATGTGGTGACTGTTACTGGCATTATAAGAGTAATTAACAACTACATGGATATTGGAGGAGGAAAATCAAAAGGCAAAAATCAGGGATTCTTCTACTTGTATGTTGAAGCCATTTCAATTAAAAATTCCAAATCACAATCTACGCTTGGGAATGTAGAAGATTCTAATTTAGACGCCAGAGCAACAGAACTACCTAATTTATATACATTCTCCCAAAGGGATTTGGAATTTATTGTGAAGTTCTCATCAGAACATGGTTCAGATATCTTTCGTCAAATACTTCATTCTATATGCCCATCCATCTATGGACATGACCTAGTTAAAGCTGGTATTGCACTAGCACTTTTTGGAGGTGTACGAAAGCATTCAAAAGATCAGAACAAGGTTCCTGTAAGAGGGGATATTCATGTCATAATTGTTGGTGATCCTGGACTAGGCAAAAGCCAGTTACTGCAAGCGGCTGCCGGTGTTTCTCCACGTGGTATTTATGTTTGTGGCAATGCCACAACAAAAGCAGGCCTGACTGTAGCCGTTGTGAAGGATCCTACAACAAGTGATTATGCATTTGAAGCTGGTAGTGCTATGGTCCTTGCTGACGGTGGATTGTGCTGCATTGATGAGTTTGATAAAATGTCTACCGAACATCAGGCTCTATTGGAAGCCATGGAACAACAATGCGTCTCTATTGCAAAGGCAGGACTGGTAGCAAGTTTATCAGCACGCACTTCTGTCTTAGCAGCTGCAAACCCTGTTGGAGGTCATTATAACCGTGCAAAAACTGTGAACGAAAATTTGAAGATGAGTTCTGCTCTTCTCTCGCGATTTGATTTAGTTTTCATTCTGCTCGATAAACCTAATGAGCTTCTGGATAAGCAAGTTTCAGATCACATTATGTCTCTTCATGCTGGAAATGGAGAACTGTTGCCAGCTGAAAAAAGGCAACGTAAAGATATGCCTCCCCATTTAAAAAGTCCAGCAGTAGATAATGCCGGATGCATAGTTACAAGAGCGTCGGGAGGCTCCTTGGTTTCAAGGCTGAAACGAGATACAACAAAAGATGTTGATTTTGTTCCATTACCTGGTCAACTTCTACGCAAATATACAACTTATGCAAGAAATTTTGTCTTTCCTAGGATGTCAAAGCCGGCAGCAGATATCCTGCAGAAGTTTTACTTACGATTGAGAGATCAGAATACATCCGCAGATAGTACGCCAATTACAGCTCGACAACTGGAAAGTTTGGTGAGGCTAGCAGAAGCTCGAGCCAGGATCGACTTGAGAGAAGAAATAACAGCCCAAGATGCCATGGATGTGGTTGAAATTATGAAAGAATCCCTCTACGACAAGTACGTAGATGAGCATGGCGTTGTAGATTTTGGTCGAAGTGGGGGGATGAGTCAACAGAAAGAAGCTAAACGGTTTTTGAGTGCCCTCAATAAGCAGTCAGAATTACAACAAAAAGATTGTTTTACAATTTCTGAAATTTACAGTTTGGCGGATAGGATTAGTCTAAGAGTTCCCGACATTGACACATTTGTTGATAATCTCAACAGTGTCGGTTATCTGCTTAAGAAGGGGCCAAAGACATTCCAGTGCACTTCGATCAACTACACGGGACCGAAGATTCTTGTTTTTACATTTGAAACGGGCGACGAAGTTACCGATGTCAATGAATACAAAATCAAAGACGATTGCATTAGCTCAACCACTAATGTCTACAAGTATCAAAGAGCTCTACAAAATTAA 2517 40.48 MYASQGGIFGIEYEDAGFTVNGKLLDLYFPHTLFTVENTWLNLISQFISFFSSPTGRSFSSQVKEGDDGIFILSIDFQQFQKIYDIPIFYTMLEDAPKIALKCMCAALHQVLLMETENNLEDVARIVIRPHNCPKSMVSLKNLKAAYIDKFVSIRGTVVKASTVRPLVIQMSFSCSKCKTNITRNFPDGKFSPPSICELDGCKSKTFNPIRSTSQAIDFQKIRLQEVLKSEDHEEGRVPRTVECELTEDLVDACIPGDVVTVTGIIRVINNYMDIGGGKSKGKNQGFFYLYVEAISIKNSKSQSTLGNVEDSNLDARATELPNLYTFSQRDLEFIVKFSSEHGSDIFRQILHSICPSIYGHDLVKAGIALALFGGVRKHSKDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAGVSPRGIYVCGNATTKAGLTVAVVKDPTTSDYAFEAGSAMVLADGGLCCIDEFDKMSTEHQALLEAMEQQCVSIAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKMSSALLSRFDLVFILLDKPNELLDKQVSDHIMSLHAGNGELLPAEKRQRKDMPPHLKSPAVDNAGCIVTRASGGSLVSRLKRDTTKDVDFVPLPGQLLRKYTTYARNFVFPRMSKPAADILQKFYLRLRDQNTSADSTPITARQLESLVRLAEARARIDLREEITAQDAMDVVEIMKESLYDKYVDEHGVVDFGRSGGMSQQKEAKRFLSALNKQSELQQKDCFTISEIYSLADRISLRVPDIDTFVDNLNSVGYLLKKGPKTFQCTSINYTGPKILVFTFETGDEVTDVNEYKIKDDCISSTTNVYKYQRALQN 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16812915 16822426 + BLOR21468 Blo09g00553 65180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo09g00553 838 CDD MCM8 350 702 - -
Blo09g00553 838 Pfam MCM P-loop domain 343 558 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo09g00553 838 PRINTS Mini-chromosome maintenance (MCM) protein family signature 501 513 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo09g00553 838 PRINTS Mini-chromosome maintenance (MCM) protein family signature 528 536 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo09g00553 838 PRINTS Mini-chromosome maintenance (MCM) protein family signature 450 464 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo09g00553 838 PRINTS Mini-chromosome maintenance (MCM) protein family signature 477 490 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo09g00553 838 PRINTS Mini-chromosome maintenance (MCM) protein family signature 389 404 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo09g00553 838 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 356 709 IPR027417 -
Blo09g00553 838 PANTHER DNA HELICASE MCM8 21 792 - -
Blo09g00553 838 SMART AAA_5 390 542 IPR003593 -
Blo09g00553 838 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 21 792 IPR031327 GO:0003677|GO:0005524|GO:0032508
Blo09g00553 838 Gene3D - 140 270 IPR012340 -
Blo09g00553 838 Gene3D - 167 217 - -
Blo09g00553 838 Gene3D - 324 713 IPR027417 -
Blo09g00553 838 Pfam MCM OB domain 140 269 IPR033762 -
Blo09g00553 838 SUPERFAMILY Nucleic acid-binding proteins 68 270 IPR012340 -
Blo09g00553 838 Pfam MCM AAA-lid domain 620 703 IPR041562 -
Blo09g00553 838 ProSiteProfiles MCM family domain profile. 346 554 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo09g00553 838 SMART mcm 136 704 IPR031327 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00553 Blo-Chr9:16812915 Blo10g00430 Blo-Chr10:7793506 8.02E-87 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo09g00553 K10737 - csv:101211972 1234.94