Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00016 ATGGGCCCGCTGGGGAACGGGGACGACGGAGGTGCACAGCGGGTGGAAATCCCGGCTGCCAAGCCATTTCTGAAATCACTGAAGAACGGTCTGAAGGAGACCTTCTTCCCTGACGACCCACTGAGACAATTCAAGAACCAACCCACGTTGCAAAAGGTCAAGCTTGGATTTCAGTACTTCTTCCCGGTCCTGGAATGGGCTCCTCGCTATACCTTTGCTTTCCTGAAAGCAGATCTCATTGCTGGAATCACCATTGCCAGCCTCGCTATTCCGCAGGGGATCAGCTACGCTAAGCTCACTAATCTTCCTCCAATATATGGCCTGTATTCGAGCTTTGTGCCTCCATTGATATATGCGATTATGGGGAGCTCCAGGGATCTGGCCGTCGGGACAGTGGCGGTTGCGTCGCTGCTGATAGCGTCGATGTTGGGAGAGGAGGTTGACGCAAACAAAAGCCCTGAGCTTTACATTCACCTCGCTTTCACTGCCACCTTCTTCGCCGGAGTATTCCAGGCTGCCTTGGGATTATTCAGGCTAGGTTTTGTGGTGGATTTTCTCTCGCATGCTACGATAGTCGGGTTCATGGCTGGATCAGCGGTGGTAGTGAGCCTGCAACAACTCAAAGGCATTCTGGGCCTCGACCATTTCACTTCCCACGCTGACATCGTCTCTGTTATGCGTTCTGTTTTCACCCAAACCCACCAGTGGAAATGGCAGAGTGGAGTTATAGGATGCGTCTTCCTCATTTTCCTCGTCAGCACCAGATTATTCAGCAAGAAGCGGCCAAAATTCTTTTGGTTAGCAGCAATGGCGCCTTTAATGTCAGTCATTTTGGCGAGTCTTTTTGTCTTTGTGACCCATGCTGAGAGACATGGAGTTCAAGTGATAGGAAAGCTGAAGAAGGGTTTAAACCCCATATCAGTTACAGATCTCATCTTTGTGCCTCCTTATTTATCTCTCGCTGTAAGAACCGGCATCATCACGGGGATAGTAGCTCTCGCCGAAGGAATAGCAGTTGGGAGGAGCTTTGCCATGTTCAAGAACTACAATATTGATGGAAACAAAGAGATGGTTGCAATTGGGACCATGAACATTGTTGGCTCTTGCACTTCTTGCTATCTTTCTACAGGGCCGTTTTCCCGCTCGGCCGTGAACTACAACGCAGGATGCAAGACGGCAGCATCGAACATCGTGATGGCAATTGCAGTTATGTTCACGTTGTTGTTCTTGACACCATTGTTCCACTACACCCCCCTCGTGGTCCTCTCTGCTATTATCATGTCCGCCATGCTCGGCCTCATCGACTACCAAGCAGCCATTCATCTCTGGAAGGTCGATAAATTCGACTTTGTAATCTGCATAAGCGCATTTGCCGGCGTGGTCTTTGCCAGTGTGGAAATTGGCCTAATTATAGCTGTTGCGATATCGGTGCTTAGAGTGCTTCTGCTGATCGCAAGGCCGAGGACCTTCGCTCTCGGAAACATTCCAAACTCTATGAATTATAGAAACATGGAACAATATCCAAGAGCAAATAGTGTTCCTGGCATTCTCATACTGGAAATCAATTCTCCCCTTTATTTTGCCAATTCCAATTACTTAAGAGAAAGGATTATAAGATGGATTGATGATGAAGAAGACAGCATAAATGCTTCTGGGAGCACTAGTCTGCAGTATGTTATATTGGACATGAGTGCGGTTAGCAACATCGATACAAGCGGAATAGGCATGCTCCAAGAGGTCAAGAAGATTCTTGACAGAAGGGGATTAAAGCTTGTGCTGACTAACCCTGGTGGCGAGGCCATGAAGAAGCTCGTCAAGGCCAGGTTTGTCGAGAGCGTGGGGGAAGAATGGATCTTTCTTACGATCAGCGATGCCGTCGGTGCCTGTAATTACATGCTCCAAAAATGCGAAACGGAATCCGGGAAAGGCAAGGCAGAGGGGTGGAACAGCGTCTAA 1956 48.67 MGPLGNGDDGGAQRVEIPAAKPFLKSLKNGLKETFFPDDPLRQFKNQPTLQKVKLGFQYFFPVLEWAPRYTFAFLKADLIAGITIASLAIPQGISYAKLTNLPPIYGLYSSFVPPLIYAIMGSSRDLAVGTVAVASLLIASMLGEEVDANKSPELYIHLAFTATFFAGVFQAALGLFRLGFVVDFLSHATIVGFMAGSAVVVSLQQLKGILGLDHFTSHADIVSVMRSVFTQTHQWKWQSGVIGCVFLIFLVSTRLFSKKRPKFFWLAAMAPLMSVILASLFVFVTHAERHGVQVIGKLKKGLNPISVTDLIFVPPYLSLAVRTGIITGIVALAEGIAVGRSFAMFKNYNIDGNKEMVAIGTMNIVGSCTSCYLSTGPFSRSAVNYNAGCKTAASNIVMAIAVMFTLLFLTPLFHYTPLVVLSAIIMSAMLGLIDYQAAIHLWKVDKFDFVICISAFAGVVFASVEIGLIIAVAISVLRVLLLIARPRTFALGNIPNSMNYRNMEQYPRANSVPGILILEINSPLYFANSNYLRERIIRWIDDEEDSINASGSTSLQYVILDMSAVSNIDTSGIGMLQEVKKILDRRGLKLVLTNPGGEAMKKLVKARFVESVGEEWIFLTISDAVGACNYMLQKCETESGKGKAEGWNSV 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 175019 178389 + BLOR01806 Blo10g00016 65212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00016 651 Gene3D STAS domain 486 632 IPR036513 -
Blo10g00016 651 Pfam Sulfate permease family 75 455 IPR011547 GO:0016021
Blo10g00016 651 SUPERFAMILY SpoIIaa-like 510 629 IPR036513 -
Blo10g00016 651 CDD STAS_SulP_like_sulfate_transporter 507 622 - -
Blo10g00016 651 ProSiteProfiles STAS domain profile. 506 629 IPR002645 -
Blo10g00016 651 Pfam STAS domain 507 625 IPR002645 -
Blo10g00016 651 PANTHER SULFATE TRANSPORTER 13 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Blo10g00016 651 ProSitePatterns SLC26A transporters signature. 104 125 IPR018045 GO:0008271|GO:0008272
Blo10g00016 651 TIGRFAM sulP: sulfate permease 62 625 IPR001902 GO:0015301|GO:0016020|GO:0055085
Blo10g00016 651 PANTHER SLC26A/SULP TRANSPORTER-RELATED 13 649 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00679 Blo-Chr6:29955944 Blo10g00016 Blo-Chr10:175019 0 dispersed
Blo06g01027 Blo-Chr6:33593095 Blo10g00016 Blo-Chr10:175019 0 dispersed
Blo10g00016 Blo-Chr10:175019 Blo11g00047 Blo-Chr11:377552 0 dispersed
Blo10g00016 Blo-Chr10:175019 Blo12g00337 Blo-Chr12:19137569 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00016 K17471 - jre:109018587 1016.91