Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00079 ATGAGTCGCGGTTCAGCAGCGGCAGGTGGAGCTAAGGGGAAGAAGAAGGGGGCGAGTTTCGTTATCGACTGCGCGAAGCCGGTGGAGGATAAGATTATGGACATCGCTTCGTTGGAAAAGTTTCTTCAGGAAAGGATCAAGGTCGGAGGCAAACCGGGTGCGCTCGGTGATTCGGTCACTGTGGTCCGCGAAAAGAGCAAAATCACTGTCACCTCTGACAGCACCTTTTCTAAAAGGTACCTTAAATATTTGATTAAGAAGTATTTGAAGAAACACAATGTGCGGGATTGGCTCCGTGTGGTTGCTTCCAACAAGGATCGCAATGTTTACGAAGCTTCTTCAATGGTTTCGAATTCAAAGGGGCTTGAACTTAGCTACTATGTCGCAGTAGTTGTCTGGGACAAGCTTCTAGCTTCTTTAGTTTCTCTTTTTGCTTGCTTATTGATCTTTAAATATGGTCCTACTATGGGCAAAATTGTTCTTGTGGATGTCAGGGCCGAAACTTCCCTAAGCGAACCAATACGAACAGTCTTGTACTTTCTCGGGCTTGCTTATTGTTTTATTGGATTGTCAGCTATAACTTCCCGATTTTTCCGATCCATGGAGAATGTCGTGAAGCACTCTCGGAAGGTGGTGGAAGTAGATCCTTTGACCAAAGGTGAAACTGTTCGATATGAAAAGGTGTGGAATTTCACGATTGCAGATATTAGTCTCCTTGCATTTGGCACCAGCTTTCCTCAAATATCATTAGCTACTATTGATGCTCTCCGAAACATGGGGAAGCTTTATGCTGGAGGCTTGGGTCCTGGAACACTTGTGGGTTCTGCTGCATTTGACCTTTTCCCTATTCACGCCGTTTGTGTTGTTGTGCCAAAAGCTGGGGAATTGAAAAAGATAGCAGACTTAGGCGTTTGGCTGGTGGAGCTCTTTTGGTCTTTTTGGGCTTATATTTGGCTTTATATAATTTTAAAGGTGTGGACTCCAAATGTGATTACTCTCTGGGAAGCTTTGATAACAGTGGTGCAATATGGATTACTGTTGATTCATGCTTATGCTCAAGACAAGCGTTGGCCATACATCTCTCTTCCTCTTGCAAGAATTGAGAGGCCAGAGGATTGGGTGCCTGCAGAGATTCCTAAATACAAACAATATGATCTATATAATGATACAGATGATAGAAGAGTAGATGAAGAAGAAAATGGAAGGATTGTTGACATTTTCTCTGTCCACGCAACAGATGTTGGAGATCCTGCATATCAGGAAGTTCCAGAAACTGATTATGTTGCTGCATCTTCAGATCCAAGTGTTCAACAGGGGAACGATTTAGAAGATACTCGTGTTCTTGCATTGGCAAGTGCAGACTCTGAAAAAATCAGCATTTGTCAACGAGTGGGAAGAACTTTTTGGAAGTTACTTGTTTTTCCTTGGAAATTTTGCTTTGCTTTTGTTCCTCCTTATCATATTGGTCATGGATGGCTGGCCTTCCTTTGCTCGTTGATTTTCATAAGCGGGATCGCTTACATTGTTACTCAGCTCACCGATCTTATTAGCTGTGTCACAGGAATTAATCCTTATGTAATAGCGTTTACAGCATTGGCTAGTGGAACTTCCTGGCCAGACTTGGTTGCTAGTAAGATTGCTGCTGAACGTCAAACAATAGCCGATTCAGCCATTGCAAACATCATTTGCAGCAACTCGGTGAACATATACGTAGGCATCGGAGTTCCATGGCTGATCGACACAGCATACAATTACATCGCGTATGGAGAACCCCTACGGATCGAAGACGCATCAGGTCTCAGCTTCTCATTGGTAATCTTCTTCATTACTTCCATAGGTTGTATTGGTGTGCTAGTATTAAGACGCATCACAATAGGTGCAGAGCTTGGGGGTCCCAAGCCATGGGCCTGGATGACCTGCATCTATTTTATGCTACTTTGGCTTATTTTTCTAGTGCTATCTTCTCTTAAAGTCTCAGGGGTCATATAG 1989 43.44 MSRGSAAAGGAKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKPGALGDSVTVVREKSKITVTSDSTFSKRYLKYLIKKYLKKHNVRDWLRVVASNKDRNVYEASSMVSNSKGLELSYYVAVVVWDKLLASLVSLFACLLIFKYGPTMGKIVLVDVRAETSLSEPIRTVLYFLGLAYCFIGLSAITSRFFRSMENVVKHSRKVVEVDPLTKGETVRYEKVWNFTIADISLLAFGTSFPQISLATIDALRNMGKLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKIADLGVWLVELFWSFWAYIWLYIILKVWTPNVITLWEALITVVQYGLLLIHAYAQDKRWPYISLPLARIERPEDWVPAEIPKYKQYDLYNDTDDRRVDEEENGRIVDIFSVHATDVGDPAYQEVPETDYVAASSDPSVQQGNDLEDTRVLALASADSEKISICQRVGRTFWKLLVFPWKFCFAFVPPYHIGHGWLAFLCSLIFISGIAYIVTQLTDLISCVTGINPYVIAFTALASGTSWPDLVASKIAAERQTIADSAIANIICSNSVNIYVGIGVPWLIDTAYNYIAYGEPLRIEDASGLSFSLVIFFITSIGCIGVLVLRRITIGAELGGPKPWAWMTCIYFMLLWLIFLVLSSLKVSGVI 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 754908 763259 - BLOR01869 Blo10g00079 65275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00079 662 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 155 357 - -
Blo10g00079 662 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 447 662 - -
Blo10g00079 662 PANTHER SODIUM/CALCIUM EXCHANGER 155 357 - -
Blo10g00079 662 Pfam Sodium/calcium exchanger protein 179 351 IPR004837 GO:0016021|GO:0055085
Blo10g00079 662 Pfam Sodium/calcium exchanger protein 490 654 IPR004837 GO:0016021|GO:0055085
Blo10g00079 662 PANTHER SODIUM/CALCIUM EXCHANGER 447 662 - -
Blo10g00079 662 Gene3D - 7 123 IPR038526 -
Blo10g00079 662 Gene3D - 232 367 IPR044880 -
Blo10g00079 662 Gene3D - 447 656 IPR044880 -
Blo10g00079 662 Pfam Ribosomal L22e protein family 16 111 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00079 Blo-Chr10:754908 Blo18g00622 Blo-Chr18:10190285 4.78E-49 dispersed
Blo10g00079 Blo-Chr10:754908 Blo07g00568 Blo-Chr7:16296418 1.07E-65 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00079 K03452 - rcu:8259876 749.199