Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00094 ATGGTAGCAGAAGCTGAGATTGTTGTCTGCAAAAACAGTCCGGCGGTATTGGAGGGGCAACGCATCGGAAAAGTAAATGACCATTCTCGTCGGTGTCGTTTTTTCGGAGGAGATTTGGATTCTCCCAGTTTAACCGGAGGTCGAGCTCCCGAGTTGGTTTCTGCCGATTTACCGGCATCGCAGTTGATGGTGAGGAAATCTACAGAACAAGTTCCTGCTCTTGAACGTTCTGATCTACATTATTCTCCCACCATTTGCTCCGGCAGCTATGCTGATATCGGACCTCGGCGATTCATGGAAGACGAACACGTACGGATGGATGACCTTTCGTCGGACGCAATAGGCCTGATCAAATTTCCCAAGCCAAGTGCCTTCTATGCAGTGTTCGACGGCCATGGCGGAGCTGAAGCGTCAAATTTCGTTTGCAAAAATGTGAAGAGGCTGTTTTTCGAAGACGTCGATTTTCCAAATTCGAAGGAAGTCGATGAAGGTCTGGTAGCAGAGGTGGGGAACTCCCTTCGCCGTTCGTTTCGTTTGGCTGATCAAGCTTTAGCGGAGGAAAGCAGCGTGAGTAGTTCTTCCGGCACTACAGCTCTTACAGCTCTTGTTCTTGGGTGTGTTCTAATCGTGGCAAACGCTGGGGATTGCCGAGCCATCCTCTGCCGAGGAGGAGAGGCGATAGACATGTCAAACGATCACAGGCCAACTCTTCCCTCCGAAAGGAGACGCATAGAAGAAATGGGCGGCTTCATCAACAATGGTTACCTCAACGGCGTTTTATCCGTCACGAGAGCATTAGGGGACTGGGACTTGAAGAAGTTCCCGCCCAATTCCCCTTCGCCTCTAATCTCGGAACCGGAAATCAAGCACATGATACTGACCGAGGAAGACGAGTTTTTGATAATAGGCTGCGACGGAATTTGGGACGTAATGTCCAGTCAACAGGCCGTCACCCTAGTTCGTCGTGGCCTCCGCCGACATGGGGACTTAGATCAATGTGCTAGGGATCTTGTAAGGGAGGCTTTGAGGCGGAATTCTTTCGACAATCTTACGGTAATTGTCGTGTGCTTCTACGCGATTGATCGGGACGAGATTTCCACGCCCAGGCAGCAGAAACTGAGGTGCTGTAGTCTGTCTGCAGAAGCATTTTATAGCCTGAAAAGCTGGTTAGACAGTAGTTCAAGCCATTGA 1191 50.21 MVAEAEIVVCKNSPAVLEGQRIGKVNDHSRRCRFFGGDLDSPSLTGGRAPELVSADLPASQLMVRKSTEQVPALERSDLHYSPTICSGSYADIGPRRFMEDEHVRMDDLSSDAIGLIKFPKPSAFYAVFDGHGGAEASNFVCKNVKRLFFEDVDFPNSKEVDEGLVAEVGNSLRRSFRLADQALAEESSVSSSSGTTALTALVLGCVLIVANAGDCRAILCRGGEAIDMSNDHRPTLPSERRRIEEMGGFINNGYLNGVLSVTRALGDWDLKKFPPNSPSPLISEPEIKHMILTEEDEFLIIGCDGIWDVMSSQQAVTLVRRGLRRHGDLDQCARDLVREALRRNSFDNLTVIVVCFYAIDRDEISTPRQQKLRCCSLSAEAFYSLKSWLDSSSSH 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 966222 968490 + BLOR01884 Blo10g00094 65290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00094 396 SMART PP2C_SIG_2 101 357 IPR001932 -
Blo10g00094 396 SMART PP2C_4 76 355 IPR001932 -
Blo10g00094 396 ProSitePatterns PPM-type phosphatase domain signature. 125 133 IPR000222 GO:0043169
Blo10g00094 396 ProSiteProfiles PPM-type phosphatase domain profile. 86 357 IPR001932 -
Blo10g00094 396 Pfam Protein phosphatase 2C 96 349 IPR001932 -
Blo10g00094 396 Gene3D - 69 362 IPR036457 -
Blo10g00094 396 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 376 - -
Blo10g00094 396 CDD PP2Cc 87 357 IPR001932 -
Blo10g00094 396 SUPERFAMILY PP2C-like 78 357 IPR036457 -
Blo10g00094 396 PANTHER PROTEIN PHOSPHATASE 2C 1 376 IPR015655 GO:0004722|GO:0006470
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo07g00612 Blo10g00094 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00094 Blo-Chr10:966222 Blo12g00848 Blo-Chr12:26748581 4.98E-95 dispersed
Blo10g00094 Blo-Chr10:966222 Blo02g00464 Blo-Chr2:6577452 3.35E-115 wgd
Blo10g00094 Blo-Chr10:966222 Blo07g00612 Blo-Chr7:18939160 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00094 K14803 - tcc:18613771 458.373